Sequence of DPV Banana bunchy top virus

Banana bunchy top virus isolate Robusta BT-1 segment 2, complete sequence.

ACC No: AY960129

Dated: 2006-04-01 | Length: 1060 | CRC: -1551460299

                
ID   AY960129   standard; circular genomic DNA; VRL; 1060 BP.
XX
AC   AY960129;
XX
SV   AY960129.1
XX
DT   01-APR-2006 (Rel. 87, Created)
DT   01-APR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Banana bunchy top virus isolate Robusta BT-1 segment 2, complete sequence.
XX
KW   .
XX
OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
XX
RN   [1]
RP   1-1060
RA   Smitha R., Krishnareddy M.;
RT   "Molecular characterization of different components of Banana bunchy top
RT   virus infecting banana";
RL   Unpublished.
XX
RN   [2]
RP   1-1060
RA   Smitha R., Krishnareddy M.;
RT   ;
RL   Submitted (11-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1060
FT                   /organism="Banana bunchy top virus"
FT                   /segment="2"
FT                   /specific_host="Banana cultivar Robusta"
FT                   /isolate="Robusta BT-1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Hessaraghatta, Bangalore"
FT                   /isolation_source="infected leaf"
FT                   /virion
FT                   /db_xref="taxon:12585"
FT   stem_loop       1. .31
FT   CDS             143. .376
FT                   /codon_start=1
FT                   /product="unknown"
FT                   /note="putative"
FT                   /protein_id="AAY35074.1"
FT                   /translation="MTEGQGNRSTLFWLAQQDTRIKLLIRRTRGRTEILLHLYKYPTPV
FT                   KDNCSLSSVKVVVLRRKIASGDRRNDVHLERR"
FT   TATA_signal     256. .264
FT                   /note="putative"
FT   polyA_signal    487. .492
FT                   /note="putative"
FT   polyA_signal    580. .585
FT                   /note="putative"
FT   polyA_signal    644. .649
FT                   /note="putative"
XX
SQ   Sequence 1060 BP; 345 A; 177 C; 243 G; 295 T; 0 other;

ay960129 Length: 1060  01-APR-2006  Type: N  Check: 3836  ..

       1  ggcgctgggg cttattatta ccccccgtgc cgggacggga catgggcttt
      51  ttaaatgggc ttcgagagtt tgaacagttc agtatcttcg ttattgggcc
     101  aactcggccc aataattaag agaacgtgtt caaattcgtg atatgaccga
     151  aggtcaaggt aaccggtcaa cattattctg gcttgcgcag caagatacac
     201  gaattaaatt attaattcgt aggacacgtg gacggaccga aatactcctg
     251  catctctata aataccctac tcctgtgaag gataattgct ctctctcttc
     301  tgtcaaggtg gttgtgctga ggcggaagat cgccagcggc gatcgtcgga
     351  acgatgtgca tctagagagg cggtgaagaa actacgaagc gtatatcggg
     401  tatttataga cttatagcgt agctagaagt atatactgta cagataatgt
     451  attttgtaat ttacgaagaa tttcgtattt gatattaata aaacacctgg
     501  gtgtgttaat gtttacatta aatagtatcc tgaatgtaca caataaaata
     551  cagtatacgg aacgtatact gacaaagtaa ttaaatgata ggcgaagcat
     601  gactaacagg tgtttaggta taattaacat aattatgaga agtaataata
     651  atacggaaaa tgaataagta tgaggtgaaa gaggagatat tagaatattt
     701  aaaaacccaa ttatattatt ttggaacgaa atacaacacg ctatgaaata
     751  caagacgcta tgacaaatgt acgggtatct gattgtttat cttaacgctt
     801  aagggccgca ggcccgtcaa gatgaatgaa cggtccagat taattcctta
     851  gcgacgaaga aaggaatctt tcaggggact acacaatata cagctgtcaa
     901  tgatttatta aataatataa tatccaaaag acttctgtac ccctggtaat
     951  gatgacgtgt aggggtgtcc cgatgtaata taacatagct atgtgaagag
    1001  atatgggccg ttggatgcct ccatcggacg atggaggttg aatgaacttc
    1051  tgctgacgta