Sequence of DPV Rice stripe virus

Rice stripe virus isolate HN-YY-04 CP protein gene, complete cds.

ACC No: AY973312

Dated: 2005-04-19 | Length: 969 | CRC: 306664375

                !!NA_SEQUENCE 1.0
ID   AY973312   standard; genomic RNA; VRL; 969 BP.
XX
AC   AY973312;
XX
SV   AY973312.1
XX
DT   19-APR-2005 (Rel. 83, Created)
DT   19-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Rice stripe virus isolate HN-YY-04 CP protein gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Qiu M.Q., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   "Genetic diversity of CP gene of Rice stripe virus";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Qiu M.Q., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   ;
RL   Submitted (23-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, Plant Virology, Kingshan, Fuzhou, Fujian 350002, P.R.
RL   China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /country="China"
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="HN-YY-04"
FT                   /specific_host="rice"
FT                   /segment="3"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /product="CP protein"
FT                   /protein_id="AAX85958.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFLVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD"
XX
SQ   Sequence 969 BP; 230 A; 251 C; 198 G; 290 T; 0 other;

 AY973312  Length: 969  April 26, 2005 08:41  Type: N  Check: 7358  ..

       1  ctagtcatct gcaccttctg cctcgtcctc gaagaactcc ttcaccaacc
      51  cgctgacttc agatgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agtttgctct gttgagccaa gtacagcctt gtctgattcc cataagtgct
     151  gatcgtattg acagacatac cagccagcgc atcgaagatt gtagtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc
     251  ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctccttct
     351  tcttaccctc tggcatggtc tttttggtta tttggaagga gtgaatgatg
     401  tgcacaagaa acaaaatgtg acttagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tatcacatcc tgttagtccc aggtcggagg agtccacagc catcttaaca
     551  ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc
     601  cagccttcca agagtgatag cattggcatt tgtccccacc gaggacacta
     651  tcccatacct cgacaccaag gtcgaagcct ctgtgcttcc agccgccact
     701  ttcactttct tagtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     801  ccttcagtat gccaatcaga gttgcagcat catagccagc atactctatc
     851  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ctggcttgtt ggtacccat