Sequence of DPV Banana bunchy top virus

Banana bunchy top virus segment DNA-U3, complete sequence.

ACC No: AY996563

Dated: 2009-06-05 | Length: 1061 | CRC: -1974778441

                
ID   AY996563; SV 2; circular; genomic DNA; STD; VRL; 1061 BP.
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AC   AY996563;
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DT   01-SEP-2006 (Rel. 89, Created)
DT   05-JUN-2009 (Rel. 101, Last updated, Version 2)
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DE   Banana bunchy top virus segment DNA-U3, complete sequence.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1061
RA   Raza S.Q., Hyder M.Z., Hameed S., Khalid S., Naqvi S.M.S.;
RT   ;
RL   Submitted (01-APR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Department of Biochemistry, University of Arid Agriculture, Murree Road,
RL   Rawalpindi 46300, Pakistan
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RN   [2]
RC   Sequence update by submitter
RP   1-1061
RA   Raza S.Q., Hyder M.Z., Hameed S., Khalid S., Naqvi S.M.S.;
RT   ;
RL   Submitted (04-JUN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department of Biochemistry, University of Arid Agriculture, Murree Road,
RL   Rawalpindi 46300, Pakistan
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CC   On Jun 4, 2009 this sequence version replaced gi:70724364.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1061
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA-U3"
FT                   /host="Musa acuminata Colla cv. Dwarf Cavendish (Basrai)"
FT                   /isolate="KHI"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Sindh, Karachi"
FT                   /db_xref="taxon:12585"
FT   CDS             144. .377
FT                   /codon_start=1
FT                   /product="U3"
FT                   /protein_id="ACR77724.1"
FT                   /translation="MTEGQGNRSTLFWLAQQDTRIKLLIRRTRGRTEILLHLYKYPSPV
FT                   KDNCSLSSVKVVVLRRKIASGDRRNDLHLERR"
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SQ   Sequence 1061 BP; 347 A; 179 C; 244 G; 291 T; 0 other;

ay996563 Length: 1061  05-JUN-2009  Type: N  Check: 3368  ..

       1  agcgctgggg cttattatta cccccagcgc tcgggacggg acatgggctt
      51  tttaaatggg ccttgagagt ttgaacagtt cagtatcttc gttattgggc
     101  caacccggcc caataattaa gagaacgtgt tcaaattcgt ggtatgaccg
     151  aaggtcaagg taaccggtca acattattct ggcttgcgca gcaagataca
     201  cgaattaaat tattaattcg taggacacgt ggacggaccg aaatactcct
     251  gcatctctat aaatacccta gtcctgtgaa ggataattgc tctctctctt
     301  ctgtgaaggt ggttgtgctg aggcggaaga tcgccagcgg cgatcgtcgg
     351  aacgacctgc atctagagag gcggtgagga aactacgaag cgtatatccg
     401  gtatttatag acttatagcg tagctagaag tttacactgt acagatattg
     451  tattctgtaa attacgaaga atttcgtatt tgatattaat aaaacacctg
     501  ggtgtgttaa tgtttacatt aaatagtatc ttgtaggtac aaaataaaat
     551  acagtatacg gaacgtatac tgacaaagta ataaatgata ggcgaagcat
     601  gtttaacagg tgtttaggta taattaacat aattatgaga agtaataata
     651  atacggaaaa tgaataagta tgaggtgaaa gaggagatat tagaatattt
     701  aaaaacccaa ttatattatt ttggaacgaa atacaacacg ctatgaaata
     751  caagacgcta tgacaaatgt acgggtatct gattgtgtat cttaacgctt
     801  aagggccgca ggcccgtcaa gttgaatgaa cggtccagat taattcctta
     851  gcgactaaga aaggaatctt aaagtggacc acataaaaga cagctgtcat
     901  tgattaaata aataatataa tattcaaaag acctttgtac ccctgataat
     951  gatgacgtgt aggggtgtcc cgttgtaata tagcatagct atgagaagag
    1001  ataagcatct ggccgacaac tttagtggtg ggccagatgt cccgagttag
    1051  tgcgccacgt a