Sequence of DPV Cauliflower mosaic virus

Cauliflower mosaic virus VI gene, complete cds.

ACC No: D00335

Dated: 2002-12-25 | Length: 1908 | CRC: 1577048488

                !!NA_SEQUENCE 1.0
ID   MCAB1G6    standard; DNA; VRL; 1908 BP.
XX
AC   D00335;
XX
SV   D00335.1
XX
DT   11-APR-1990 (Rel. 23, Created)
DT   25-DEC-2002 (Rel. 74, Last updated, Version 6)
XX
DE   Cauliflower mosaic virus VI gene, complete cds.
XX
KW   inclusion bodies.
XX
OS   Cauliflower mosaic virus
OC   Viruses; Retroid viruses; Caulimoviridae; Caulimovirus.
XX
RN   [1]
RP   1-1908
RA   Stratford R., Plaskitt K.A., Turner D.S., Markham P.G., Covey S.N.;
RT   "Molecular properties of Bari 1, a Mild strain of cauliflower mosaic
RT   virus";
RL   J. Gen. Virol. 69:2375-2386(1988).
XX
RN   [2]
RA   Chenault K., Melcher U.;
RT   "Cauliflower mosaic virus isolate CMV-1";
RL   Plant Physiol. 101:1395-1396(1993).
XX
DR   GOA; P16666; P16666.
DR   SWISS-PROT; P16666; IBMP_CAMVB.
XX
CC   Bari 1 strain was comparedd with a severe strain as a basis for
CC   studying the genetic determinants involved in symptom production.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1908
FT                   /db_xref="taxon:10641"
FT                   /sequenced_mol="DNA"
FT                   /organism="Cauliflower mosaic virus"
FT                   /isolation_source="from Brassica campestris-rapa L"
FT                   /strain="Bari 1"
FT   CDS             131. .1699
FT                   /codon_start=1
FT                   /db_xref="GOA:P16666"
FT                   /db_xref="SWISS-PROT:P16666"
FT                   /note="522 a.a.(putative)"
FT                   /gene="VI"
FT                   /protein_id="BAA00241.1"
FT                   /translation="MEDIEKLLLQEKILMLELDLVRAKISLARAKGSMQQGGNSLHRET
FT                   PVKEEAVHSALATFAPIQAKAIPEQTAPGKESTNPLMVSILPKDMKSVQTEKKRLVTPM
FT                   DFLRPNQGIQIPQKSEPNSSVAPNRAESGIQHPHSNYYVVYNGPHAGIYDDWGSAKAAT
FT                   NGVPGVAHKKFATITEARAAADVYTTAQQAERLNFIPKGEAQLKPKSFVKALTSPPKQK
FT                   AQWLTLGVKKPSSDPAPKEVSFDQETTMDDFLYLYDLGRRFDGEGDDTVFTTDNESISL
FT                   FNFRKNANPEMIREAYNAGLIRTIYPSNNLQEIKYLPKKVKDAVKKFRTNCIKNTEKDI
FT                   FLKIKSTIPVWQDQGLLHKPKHVIEIGVSKKIVPKESKAMESKDHSEDLIELATKTGEQ
FT                   FIQSLLRLNDKKKIFVNLVEHDTLVYSKNTKETVSEDQRAIETFQQRVITPNLLGFHCP
FT                   SICHFIKRTVEKEGGAYKCHHCDKGKAIVQDASADSKVADKEGPPLTTNVEKEDVSTTS
FT                   SKASG"
XX
SQ   Sequence 1908 BP; 663 A; 460 C; 395 G; 390 T; 0 other;

 D00335  Length: 1908  January 14, 2003 14:20  Type: N  Check: 9168  ..

       1  gaattcaatc gggttaattc ttgattgaaa tccaaagaga taagattccc
      51  acacacttgt ggctgaaatc aaaaggctac tgcctatata aacactatgc
     101  cagacgtctg agaaaatcag atctccgaaa atggaggaca tagaaaaact
     151  cttactccaa gagaaaatat taatgctaga gctcgatcta gtaagggcaa
     201  aaataagcct agcaagagcg aaaggctcta tgcaacaagg aggcaactcc
     251  ctccaccgtg aaacaccggt aaaagaagaa gcagttcatt ctgcactggc
     301  tacttttgcg ccaatacaag caaaggctat tccagagcaa acggctcctg
     351  gtaaagaatc aacaaacccg ttgatggtta gtatcttacc aaaagatatg
     401  aaatcggtac agaccgaaaa gaaaaggctt gtcacgccta tggacttttt
     451  acgtccgaat cagggaattc aaatcccaca aaaatctgag cctaacagtt
     501  cagttgctcc taacagagca gaatcgggta ttcaacaccc tcatagcaac
     551  tactacgtcg tctataacgg accgcatgcc ggaatatacg atgactgggg
     601  cagtgctaag gcagcaacaa acggagttcc cggagttgcc cacaagaagt
     651  ttgccactat tacagaggca agagcggcgg ctgacgttta cacgacagct
     701  caacaagcag aaaggctgaa cttcatcccc aaaggagaag cccagctaaa
     751  gcccaaaagc tttgttaagg ccttaacaag cccaccaaag caaaaagccc
     801  aatggctcac tctaggagtt aaaaagccca gcagtgatcc agcaccaaaa
     851  gaagtctcct ttgaccaaga gacaacaatg gatgacttcc tgtatcttta
     901  cgatctagga agaagattcg acggagaagg cgacgacacc gtcttcacta
     951  ctgataacga gagcatcagt ctcttcaatt tcaggaagaa cgctaatcca
    1001  gagatgatta gagaggcata caacgcaggc ctcataagaa cgatctaccc
    1051  tagcaacaat ttgcaggaga tcaaatacct tcccaagaag gtcaaagatg
    1101  cagtgaagaa attcagaacc aactgcatca agaacacaga gaaagatata
    1151  tttctcaaga tcaaaagcac catcccagta tggcaagatc aaggcttact
    1201  ccataagcca aaacacgtaa tagagatcgg agtctctaaa aagatagtgc
    1251  ctaaggaatc taaggccatg gagtcaaagg accattcaga agacctaata
    1301  gaactagcca ctaaaaccgg cgaacagttc atacagagcc tcttgaggct
    1351  taatgacaag aagaagatct tcgtcaacct agtggagcac gacacgctgg
    1401  tctactccaa aaacaccaag gaaacagtct ctgaagacca aagggcaata
    1451  gagacatttc aacaaagggt aatcactcca aacctcctcg gattccattg
    1501  cccgtcaatc tgtcacttca tcaaaaggac agtagaaaag gaaggtggcg
    1551  cctacaaatg tcaccattgc gataaaggaa aggctatcgt tcaagatgcc
    1601  tctgccgaca gtaaggtggc cgacaaagaa ggtccaccac tcaccactaa
    1651  cgtggaaaaa gaagacgtct caaccacgtc ttcaaaagca agtggatgac
    1701  gtgacttgtc tccactgacg taagggatga cgcacatccc actatccatc
    1751  gcaagaccct tcctctatat aaggaagttc atttcatttg gagaaggcac
    1801  gctgaaatca ccagcctctc tctacaactc tctctctctc taaatttctc
    1851  cgccaataat gtgtgagtag tttcccgata aggaattagg gttcttatag
    1901  ggtttcga