Sequence of DPV Potato virus X
Potato virus X genes for 166K protein, 25K protein, 12K protein, 8K protein, coat protein.
ACC No: D00344
Dated: 2003-07-07 | Length: 6435 | CRC: -773514616
!!NA_SEQUENCE 1.0
ID PVXX3 standard; RNA; VRL; 6435 BP.
XX
AC D00344;
XX
SV D00344.1
XX
DT 11-APR-1990 (Rel. 23, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 6)
XX
DE Potato virus X genes for 166K protein, 25K protein, 12K protein, 8K
DE protein, coat protein.
XX
KW .
XX
OS Potato virus X
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potexvirus.
XX
RN [1]
RP 1-6435
RX MEDLINE; 88299944.
RX PUBMED; 3404114.
RA Huisman M.J., Linthorst H.J., Bol J.F., Cornelissen B.J.;
RT "The complete nucleotide sequence of potato virus X and its homologies at
RT the amino acid level with various plus-stranded RNA viruses";
RL J. Gen. Virol. 69:1789-1798(1988).
XX
DR GOA; P07697.
DR GOA; P17779.
DR GOA; P17780.
DR GOA; P17781.
DR GOA; P17782.
DR SWISS-PROT; P07697; VMEM_PVX.
DR SWISS-PROT; P17779; RRPO_PVXX3.
DR SWISS-PROT; P17780; VHEL_PVXX3.
DR SWISS-PROT; P17781; V07K_PVXX3.
DR SWISS-PROT; P17782; COAT_PVXX3.
XX
CC Submitted in computer readable form by M. Huisman on 28-DEC-1988.
CC The ORF 1 product contained domains of homology with the tabacco
CC mosaic virus 126K and 183K products. The ORFs 2 and 3 products
CC showed homologies with the barley stripe mosaic virus 58K and 14K
CC proteins, the beet necrotic yellow vein virus 42K and 13K products
CC and the white clover mosaic virus 26K and 13K products,
CC respectively.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6435
FT /db_xref="taxon:12183"
FT /mol_type="genomic RNA"
FT /note="5'end of genomic RNA"
FT /note="clone pX[25,51,633]"
FT /note="isolated from Nicotina tabacum cv"
FT /organism="Potato virus X"
FT /strain="X3"
FT CDS 85. .4455
FT /codon_start=1
FT /db_xref="GOA:P17779"
FT /db_xref="SWISS-PROT:P17779"
FT /product="166K protein"
FT /protein_id="BAA00249.1"
FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV
FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM
FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTETAYISDTLHFLDPSYIVETFQ
FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ
FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR
FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS
FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG
FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL
FT DCFTRMPAYAVNAEEDLATIRKTPEMDVGQEVKEPAGDRNQYSNPAETFLNKLHRKHSR
FT EVKHQAVKKAKRLAEIQESMRAEGEAEPNETSGGMGAIPSNAELPGTSDARQELTLPTT
FT KPVPARWEDASFTDSSVEEEQVRLLGEEAVKTATQQVIEGLPWKHWIPQLNAVGFKALL
FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELLVMNRSPATIPLDLLRARDYGS
FT DVKNKRIGAITKTQATSWGEYLTGKIESLTERKVATCVIHGAGGSGKSHAIQKALREIG
FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE
FT ALVCFYSKIKLIILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD
FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRKLYMGTGRNDTFTYAGCQGLTK
FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV
FT REQALREYEPAEAEPIQEPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC
FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQEANFREFLSKKDIGDVLFLNYQKA
FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV
FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS
FT VWALNNWNFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI
FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF
FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC
FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL"
FT CDS 4486. .5166
FT /codon_start=1
FT /db_xref="GOA:P17780"
FT /db_xref="SWISS-PROT:P17780"
FT /product="25K protein"
FT /protein_id="BAA00250.1"
FT /translation="MDILISSLKSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR
FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA
FT PEFSLEPHFYLETSFRVPRKVADLIAGCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI
FT DEESETTLSRHGVEFVKPCQVTGLELKVVTIVSAAPIEEIGQSTAFYNAITRSKGLTYV
FT RAGT"
FT CDS 5147. .5494
FT /codon_start=1
FT /db_xref="GOA:P07697"
FT /db_xref="SWISS-PROT:P07697"
FT /product="12K protein"
FT /protein_id="BAA00251.1"
FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN
FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH
FT TCACGNNHSSH"
FT CDS 5427. .5639
FT /codon_start=1
FT /db_xref="GOA:P17781"
FT /db_xref="SWISS-PROT:P17781"
FT /product="8K protein"
FT /protein_id="BAA00252.1"
FT /translation="MEVNTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA
FT CKLDAETIKAIADLKPLSVERLSFH"
FT CDS 5650. .6363
FT /codon_start=1
FT /db_xref="GOA:P17782"
FT /db_xref="SWISS-PROT:P17782"
FT /product="coat protein"
FT /protein_id="BAA00253.1"
FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT TGTTTAEAVVTLPPP"
XX
SQ Sequence 6435 BP; 1973 A; 1522 C; 1476 G; 1464 T; 0 other;
D00344 Length: 6435 July 15, 2003 09:11 Type: N Check: 6352 ..
1 gaaaactaaa ccatacacca ccaacacaac caaacccacc acgcccaatt
51 gttacacacc cgcttggaaa agcaagtcta acaaatggcc aaagtgcgcg
101 aggtttacca atcctttaca gactccacca caaaaactct catccaagat
151 gaggcttata gaaatattcg ccccatcatg gaaaaacaca aactagctaa
201 cccttacgct caaacggttg aagcggctaa tgatctagag gggttcggca
251 tagccaccaa tccctatagc attgaattgc atacacatgc agccgctaag
301 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga
351 acctgttaca tttatgttcc ttaaacccag gaagctaaac tacatgagaa
401 gaaacccgcg gatcaaggac attttccaca atgttgccat tgaaccgaga
451 gacgtagcaa ggtaccccaa ggaaacaata attgacaaac tcacagagat
501 cacaacggaa acagcataca ttagtgatac tctgcacttc ttggatccga
551 gctacatagt ggagacattc caaaactgcc caaaactgca aacattgtat
601 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg aaagcactca
651 cccgaacata tacagcctca aatacttcgg agatggtttc cagtatatac
701 caggcaacca tggtggtggg gcataccatc atgaattcgc tcatttacaa
751 tggctcaaag tgggaaagat caagtggagg gaccccaagg atagctttct
801 cggacatctc aattacacga ctgagcaggt tgagatgcac acagtgacag
851 tacagttgca ggaatcgttt gcggcaaacc acttgtactg cattaggaga
901 ggagacttgc tcacaccgga ggtgcgtact ttcggccaac ctgacaggta
951 tgtgattcca ccacagatct ttctcccaaa agttcacaac tgcaagaagc
1001 cgattcttaa gaaaactatg atgcagctct tcttgtatgt taggacagtc
1051 aaggtcgcaa aaaattgtga catctttgcc aaagtcagac aattaattaa
1101 atcatctgac ttagacaaat attctgctgt ggaactggtt tacttagtaa
1151 gctatatgga gttccttgcc gatttacaag ctaccacctg cttctcagac
1201 acactctctg gtggcttgct aacaaagacc cttgcaccgg tgagggcttg
1251 gatacaagaa aagaagatgc agctgtttgg tcttgaggac tacgcgaagt
1301 tagtcaaagc agttgatttc cacccggtgg atttttcttt caaagtggaa
1351 acttgggact tcagattcca ccccttgcaa gcgtggaaag ccttccgacc
1401 aagggaagtg tcggatgtag aggaaatgga aagtttgttc tcagatgggg
1451 acctgcttga ttgcttcaca agaatgccag cttatgcagt aaacgcagag
1501 gaagatttag ctacaatcag gaaaacgccc gagatggatg tcggtcaaga
1551 agttaaagag cctgcaggag acagaaatca atactcaaac cctgcagaaa
1601 ctttcctcaa caagctccac aggaaacaca gtagggaggt gaaacaccag
1651 gccgtaaaga aagctaaacg cctagctgaa atccaggagt ccatgagagc
1701 tgaaggtgag gccgaaccaa atgagacgag cgggggcatg ggggcaatac
1751 ccagcaacgc cgaacttccc ggcacgagtg atgccagaca agaactcaca
1801 ctcccaacca ctaaacctgt tcctgcaagg tgggaagatg cttcattcac
1851 agattctagt gtggaagagg agcaggtaag actccttgga gaagaagcag
1901 tgaaaacagc gacgcagcaa gtcatcgaag gactcccttg gaaacactgg
1951 attcctcaac taaatgctgt tggattcaag gcgctgttaa tccagaggga
2001 taggagtgga acgatgatca tgcccatcac agaaatggtc tccgggttgg
2051 aaaaagagga cttcccggaa ggaactccaa aagagttggc acgagaatta
2101 ctcgttatga acagaagccc tgccaccatc cctttggacc tgcttagagc
2151 cagagactac ggcagtgatg taaagaacaa gagaattggt gccatcacaa
2201 agacacaggc aacgagttgg ggcgagtact taacaggaaa gatagaaagc
2251 ctgactgaga ggaaagttgc gacttgtgtc attcatggag ctggaggctc
2301 tgggaaaagt catgccatcc agaaggcact gagagaaatt ggcaagggct
2351 cggacatcac tgtagtcctg ccgaccaatg aactgcggct agattggagt
2401 aagaaggtgc ctaacactga accctatatg ttcaagacct acgaaaaggc
2451 gttaattggg ggaacaggca gcatagtcat ctttgacgat tactcaaaac
2501 ttcctcccgg ttacatagaa gccttagtct gtttctactc caaaatcaag
2551 ctaatcattc taacaggaga tagcagacag agcgtctacc atgaaactgc
2601 tgaggacgcc tccatcaggc atttggggcc agcgacagag tacttctcaa
2651 aatactgccg atactatctc aatgctacac accgcaacaa gaaagacctt
2701 gcgaacatgc ttggtgtcta cagtgagaga acgggagtca ctgaaatcag
2751 catgagcgcc gagtttttag aaggaatccc aactttagta ccctcggatg
2801 agaagagaaa gctgtacatg ggcaccggga ggaatgacac attcacatac
2851 gctggatgcc aggggctaac taagccgaaa gtacaaatag tgttggacca
2901 caacacccaa gtgtgtagtg cgaatgtgat gtacacggca ctttctagag
2951 ccaccgatag gattcacttc gtgaacacaa gtgcaaactc ctcggccttc
3001 tgggaaaagt tggacagcac cccttacctc aagactttcc tatcagtggt
3051 gagagaacaa gcactcaggg agtatgagcc ggcagaggca gagccaattc
3101 aagagcctga gccccagaca cacatgtgtg tcgagaatga ggagtccgtg
3151 ctagaagagt acaaagagga actcttggaa aagtttgaca gagagataca
3201 ctctgaatcc catggtcatt caaactgtgt ccaaactgaa gacacaacca
3251 ttcagttgtt ttcgcatcaa caagcaaaag atgagaccct cctctgggcg
3301 accatagatg cgcggctcaa gactagcaat caagaggcaa acttccgaga
3351 attcctgagc aagaaggaca ttggggacgt tctgttttta aactaccaaa
3401 aagctatggg tttgcccaaa gagcgtattc ctttttccca agaggtctgg
3451 gaagcttgtg cccacgaagt acaaagcaag tacctcagta agtcaaagtg
3501 caacttgatc aatgggactg tgagacagag cccagacttc gatgaaaaca
3551 agattatggt attcctcaag tcgcagtggg tcacaaaggt ggaaaaacta
3601 ggtctaccca agattaagcc aggtcaaacc atagcagcct tttaccagca
3651 gactgtgatg ctttttggaa ctatggctag gtacatgcga tggttcagac
3701 aggctttcca gccaaaagaa gtcttcataa actgtgagac tacgccagaa
3751 gacatgtctg tatgggcctt gaacaactgg aatttcagca gacctagctt
3801 agctaatgac tacacagctt tcgaccagtc tcaggatgga gctatgctgc
3851 aatttgaggt gctcaaagcc aagcaccact gcataccaga ggaaatcatc
3901 caagcataca tagacattaa gaccaatgca cagattttcc taggcacatt
3951 atcgattatg cgcctgactg gtgagggtcc cacttttgat gcaaacactg
4001 agtgcaacat agcttacacc cacacaaagt ttgacatccc agccggaact
4051 gctcaagttt atgcaggaga cgactccgca ctggattgcg ttccagaagt
4101 gaagcatagt ttccacaggc ttgaagacaa attactcctc aagtcaaagc
4151 ctgtaatcac gcagcaaaag aaaggcagtt ggcctgagtt ttgtggttgg
4201 ctgatcacac caaaaggggt aatgaaagac ccaattaagc tccatgttag
4251 cttaaaattg gccgaagcta agggtgaact caagaaatgt caagattcct
4301 atgaaattga tctgagttat gcctatgacc acaaggactc tctgcatgac
4351 ttgttcgatg agaaacagtg tcaggcacat acactcactt gcaggacact
4401 aatcaagtca gggagaggca ctgtctcact tccccgcctc agaaactttc
4451 tttaaccgtt aatttacctt atagatttga ataagatgga tattctcatc
4501 agtagtttga aaagtttagg ttattctagg acttctaaat ctttagattc
4551 aggacctttg gtagtacatg cagtagccgg agcaggtaag tccacagccc
4601 taaggaagtt gatcctcaga cacccaacat tcaccgtgca tacactcggt
4651 gtccctgaca aggtgagtat cagaactaga ggcatacaga agccaggacc
4701 tattcctgag ggcaatttcg caatcctcga tgagtatact ttggacaaca
4751 ccacaaggaa ctcataccag gcactttttg ctgaccctta tcaggcacct
4801 gagtttagcc tagagcccca cttctacttg gaaacatcat ttcgagttcc
4851 gaggaaagtg gcagatttga tagctggctg tggcttcgat ttcgagacta
4901 actcacagga agaagggcat ttagagatca ctggcatatt caaagggccc
4951 ctacttggaa aggtgatagc cattgatgag gagtctgaga caacactgtc
5001 caggcatggt gttgagtttg ttaagccctg ccaagtgact ggacttgagt
5051 tgaaagtagt cactattgtg tctgccgcac caatagagga aattggccag
5101 tccacagctt tctacaacgc tatcaccagg tcaaagggat tgacatatgt
5151 ccgcgcaggg acatagactg accgctccgg tcaattctga aaaagtgtac
5201 atagtattag gtctatcatt tgctttagtt tcaattactt tcctgctttc
5251 tagaaatagt ttgccccacg tcggtgacaa cattcacagc ttgccacacg
5301 gaggagctta cagagacggc accaaagcaa tcttgtacaa ctccccaaat
5351 ctagggtcac gagtgagtct acacaacgga aagaacgcag catttgctgc
5401 cgttttgcta ctgactttgc tgatctatgg aagtaaatac atatctcaac
5451 gcaatcatac ttgtgcttgt ggtaacaatc atagcagtca ttagtacttc
5501 cttagtgagg actgaacctt gtgtcatcaa gattactggg gaatcaatca
5551 cagtgttggc ttgcaaatta gatgcagaaa ctataaaagc cattgccgat
5601 ctcaagccac tctccgttga acggttaagt ttccattgat actcgaaaga
5651 tgtcagcacc agctagcaca acacaggcca cagggtcaac tacctcaact
5701 accacgaaaa ctgcaggcgc aactcctgcc acagcttcag gcctgttcac
5751 catcccggat ggggatttct ttagtacagc tcgtgccata gtagccagca
5801 atgctgtcgc aacaaatgag gacctcagca agattgaggc tatttggaag
5851 gacatgaagg tgcccacaga cactatggca caggctgctt gggacttagt
5901 cagacactgt gctgatgtgg gatcatctgc tcaaacagaa atgatagata
5951 caggtcctta ttccaacggc atcagcagag ctagactggc agcagcaatc
6001 aaagaggtgt gcacacttag gcaattttgc atgaagtatg ctccagtggt
6051 atggaactgg atgttaacta acaacagtcc acctgctaac tggcaagcac
6101 aaggtttcaa gcctgagcac aaattcgctg cattcgactt cttcaatgga
6151 gtcaccaacc cagctgccat catgcccaaa gaggggctca tccggccacc
6201 gtctgaagct gaaatgaatg ctgcccaaac tgctgctttt gtgaagatta
6251 caaaggccag ggcacaatcc aacgactttg ccagcctaga tgcagctgtc
6301 actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct
6351 accaccacca taactacgtc tacataaccg acgcctaccc cagtttcata
6401 gtattttctg gtttgattgt atgaataata taaat