Sequence of DPV Arabis mosaic virus large satellite RNA

Arabis mosaic virus large satellite RNA gene for hypothetical protein, complete cds.

ACC No: D00664

Dated: 2007-12-15 | Length: 1104 | CRC: -540482569

                
ID   D00664; SV 1; linear; genomic RNA; STD; VRL; 1104 BP.
XX
AC   D00664;
XX
DT   27-MAR-1991 (Rel. 27, Created)
DT   15-DEC-2007 (Rel. 94, Last updated, Version 5)
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DE   Arabis mosaic virus large satellite RNA gene for hypothetical protein,
DE   complete cds.
XX
KW   .
XX
OS   Arabis mosaic virus large satellite RNA
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded RNA satellites; Large single stranded RNA satellites.
XX
RN   [1]
RP   1-1104
RX   PUBMED; 1693660.
RA   Liu Y., Hellen C., Cooper J.I., Bertioli D.J., Coates D., Bauer G.;
RT   "The nucleotide sequence of a satellite RNA associated with arabis mosaic
RT   nepovirus";
RL   J. Gen. Virol. 71:1259-1263(1990).
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CC   These data kindly submitted in computer readable form by:
CC   Yuan-Yi Liu
CC   Institute of Virology
CC   and Environmental Microbiology
CC   Mansfield Road
CC   Oxford OX1 3SR
CC   United Kingdom
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1104
FT                   /organism="Arabis mosaic virus large satellite RNA"
FT                   /mol_type="genomic RNA"
FT                   /clone="A3/3, A3/2"
FT                   /note="lilac isolate"
FT                   /note="synonym: Arabis mosaic virus satellite RNA"
FT                   /db_xref="taxon:190809"
FT   CDS             15. .1097
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /note="ORF of satellite RNA"
FT                   /note="third RNA (RNA-3)"
FT                   /db_xref="UniProtKB/Swiss-Prot:P24820"
FT                   /protein_id="BAA00564.1"
FT                   /translation="MDSHINANTSFSSPRVSVEILVPTKYAKLFTLKQLTRMLVLSCKH
FT                   RARQAANPVSKRTSRDRDGSKIMGQGPPAVGPRVSKGHKQQSDGGASLAPVKSKRAVRR
FT                   EKRRCRKKGATKAGTTPVQKGGHCVHASKGQKQATYLSSLLSNPSGAKSRMGAVSKPPQ
FT                   TKNAPDASKGGFTLTAISPAECRKETARRFHPITGTFKGAPGFCTRSREGCGVCAACEA
FT                   KLAQLGFDRSFDSIGTSRVIRVDSMKEETSDDMASPSATEPVGFWAPAEKQAPRWEGQP
FT                   IKRCDVVTLARVTPVLRMLRKVDPTFVDNRLLWEAAHSDSFSSAQVRIPLVALATRGRE
FT                   DCCGTSFVYSLTQVGILVAL"
XX
SQ   Sequence 1104 BP; 251 A; 283 C; 309 G; 261 T; 0 other;

d00664 Length: 1104  15-DEC-2007  Type: N  Check: 6887  ..

       1  tatgaaaaat ttctatggat tcccatatta acgcgaatac atctttttcc
      51  tctcccagag tctcagttga gattctggtc ccaaccaagt acgcgaaact
     101  gtttaccctt aaacagctca ctcgcatgct tgtattgtcg tgtaagcacc
     151  gtgcacggca agccgctaac ccggtaagca aacggacctc ccgagatcga
     201  gatgggagta aaataatggg tcagggacct cctgctgtgg gcccgcgagt
     251  gtcgaaggga cacaaacagc agtctgacgg aggggcgagc ctagcccctg
     301  tgaagtctaa gcgcgcagta cgtcgtgaaa agcgtcgctg ccgcaaaaaa
     351  ggcgcaacca aggccgggac tacacccgta caaaaaggtg ggcattgtgt
     401  ccacgcctcg aaggggcaga agcaggcgac ttatttgtct agcttgcttt
     451  ccaatccttc tggggcaaaa tccagaatgg gggctgtgag caagcccccc
     501  caaacaaaaa atgctcccga cgccagcaag ggtggtttca cccttactgc
     551  tatctcaccg gctgagtgcc ggaaggaaac cgcgcgcagg tttcacccta
     601  taactggtac cttcaagggt gcccctgggt tttgcacgcg gtcccgagag
     651  ggttgtggcg tctgtgcagc ttgtgaagcc aagcttgcac agcttggttt
     701  cgaccggagt ttcgactcga ttggcacttc acgtgtcatc cgtgtcgatt
     751  caatgaagga agaaacttct gatgacatgg ctagtcctag tgctacagag
     801  cctgttgggt tctgggctcc tgctgaaaag caggcccctc gttgggaggg
     851  acagcccata aaaaggtgcg atgtggtgac actcgcacgc gtgacgccgg
     901  ttctccggat gttgcgtaag gttgatccca cttttgtgga caaccggcta
     951  ttatgggaag ctgcgcactc agacagtttt tcctcagcgc aagtgcgtat
    1001  ccctttggtt gctttggcga ctcggggtag ggaagactgt tgcgggacat
    1051  cgtttgttta tagtctgacg caagttggga ttttggttgc tctttagtca
    1101  actc