Sequence of DPV Chicory yellow mottle virus large satellite RNA

Chicory yellow mottle virus large satellite RNA gene for hypothetical protein, complete cds.

ACC No: D00686

Dated: 2007-12-15 | Length: 1165 | CRC: -1081286673

                
ID   D00686; SV 1; linear; genomic RNA; STD; VRL; 1165 BP.
XX
AC   D00686;
XX
DT   07-JUN-1991 (Rel. 28, Created)
DT   15-DEC-2007 (Rel. 94, Last updated, Version 5)
XX
DE   Chicory yellow mottle virus large satellite RNA gene for hypothetical
DE   protein, complete cds.
XX
KW   .
XX
OS   Chicory yellow mottle virus large satellite RNA
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded RNA satellites; Circular single stranded RNA satellites.
XX
RN   [1]
RP   1-1165
RA   Rubino L., Tousignant M.E., Steger G., Kaper J.M.;
RT   "Nucleotide sequence and structural analysis of two satellite RNAs
RT   associated with chicory yellow mottle virus (CYMV)";
RL   J. Gen. Virol. 0:0-0(1991).
XX
CC   These data kindly submitted in computer readable form by:
CC   Gerhard Steger
CC   Institut fuer Physikalische Biologie
CC   Heinrich-Heine-Universitaet
CC   Universitaetsstr. 1
CC   D 4000 Duesseldorf 1
CC   F.R.G.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1165
FT                   /organism="Chicory yellow mottle virus large satellite RNA"
FT                   /isolate="C"
FT                   /mol_type="genomic RNA"
FT                   /note="large satellite RNA"
FT                   /db_xref="taxon:192021"
FT   misc_signal     1. .9
FT                   /note="5'-consensus sequence of VPg"
FT   CDS             17. .1105
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /note="polypeptide"
FT                   /db_xref="UniProtKB/TrEMBL:Q04325"
FT                   /protein_id="BAA00590.1"
FT                   /translation="MARTVIIHAVASTRSVTASPTTANGRGRASRKCTKNNAAVESSRP
FT                   RKLQRTAPIKTGTRDNRSYAQVVMENCHHSHQSKARSSEKFVAAKKVARPSVAVPSKLT
FT                   TGNKFDVLGFERHAIDRAVATSVPTKSVQEVVSVQKGTQYVVNHTGHSYGCSRKGNYAS
FT                   TSYRCCAKVVEEPVMEKKTVFTDVPDEAAELLRQEFLAKMPQLGHSVTLCPVGVDTLAW
FT                   GNCSELDSAVAAKPAWFGVPVKQQRKKMSRRDLRNLLSALRLARTTVNKSCSLGDAFMW
FT                   AWRTLGFGGAAPLPDLKGWELSHREERAAAPLHMYVLVIRCGGVGFSLWTGCFDAPGKF
FT                   IPAMVFHGFLLPLSYSWQSLEV"
XX
SQ   Sequence 1165 BP; 300 A; 276 C; 313 G; 276 T; 0 other;

d00686 Length: 1165  15-DEC-2007  Type: N  Check: 3419  ..

       1  ttgaaaaatc tagtcaatgg cgagaaccgt gataatccac gctgtggcct
      51  caacaaggtc agttacagcc tctcctacta ctgccaatgg taggggacgt
     101  gcgagcagga aatgcacgaa aaacaatgct gccgtggagt cctcaaggcc
     151  acgtaaactg cagaggactg ctcccattaa gaccgggacg agggataata
     201  ggtcttatgc tcaagtggtg atggaaaatt gtcaccactc ccatcaatcc
     251  aaagcgcgct cgagcgaaaa atttgtggct gctaagaagg tagcccggcc
     301  ctctgtggcc gtcccatcaa aattgacaac tgggaacaaa tttgatgttc
     351  ttggctttga gcgccatgca attgaccgcg ctgtcgctac aagcgtgccc
     401  accaaatccg ttcaggaggt ggtatctgtg cagaaaggca cacagtacgt
     451  ggtcaaccat actggacaca gttacggctg ctcccgaaag ggtaattacg
     501  caagcacctc ttacaggtgc tgtgcaaaag ttgttgagga gcccgtaatg
     551  gaaaagaaga cagtcttcac agacgtccca gatgaggcgg ctgaattact
     601  ccgacaggag ttcttggcca agatgcctca gctgggacac agtgtgacac
     651  tgtgtccggt tggagtagac actcttgctt ggggcaattg ctccgagtta
     701  gattccgctg tggctgcaaa gcccgcttgg ttcggtgttc cggtcaagca
     751  gcagcggaag aagatgtcgc ggagagatct gcgaaatctt ctgtctgctt
     801  tgcgtctcgc ccgcacgact gttaacaaat cgtgctcatt gggtgacgcc
     851  ttcatgtggg cctggcgaac gctaggcttt ggtggtgcag cacccctccc
     901  tgatcttaaa gggtgggagc tctctcatcg agaggagaga gcagctgcgc
     951  ccctccacat gtatgtgcta gtcatacggt gcgggggagt gggtttttcc
    1001  ctatggactg gctgctttga tgcgcctgga aaattcatac cagcaatggt
    1051  attccatggg tttttattgc ccttgagtta tagttggcaa agtttggagg
    1101  tttagaactt ttcatatcaa tgcaaatcaa tttgcatcca aacttaaaaa
    1151  aaaaaaaaaa aaaaa