Sequence of DPV Chicory yellow mottle virus large satellite RNA
Chicory yellow mottle virus large satellite RNA gene for hypothetical protein, complete cds.
ACC No: D00722
Dated: 2010-02-08 | Length: 1145 | CRC: -1013620432
ID D00722; SV 1; linear; genomic RNA; STD; VRL; 1145 BP.
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AC D00722;
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DT 20-DEC-1991 (Rel. 30, Created)
DT 08-FEB-2010 (Rel. 103, Last updated, Version 7)
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DE Chicory yellow mottle virus large satellite RNA gene for hypothetical
DE protein, complete cds.
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KW .
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OS Chicory yellow mottle virus large satellite RNA
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded RNA satellites;
OC unclassified Single stranded RNA satellites.
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RN [1]
RX PUBMED; 1698918.
RA Rubino L., Tousignant M.E., Steger G., Kaper J.M.;
RT "Nucleotide sequence and structural analysis of two satellite RNAs
RT associated with chicory yellow mottle virus";
RL J. Gen. Virol. 71:1897-1903(1990).
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CC These data kindly submitted in computer readable form by:
CC Luisa Rubino
CC Consiglio Nazionale delle Ricerche
CC Via Amendola 165/A
CC 70126 Bari
CC Italy
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FH Key Location/Qualifiers
FH
FT source 1. .1145
FT /organism="Chicory yellow mottle virus large satellite RNA"
FT /mol_type="genomic RNA"
FT /clone="pCY5-16, pCY5-18"
FT /note="synonym: Chicory yellow mottle virus satellite RNA
FT L1"
FT /db_xref="taxon:192021"
FT misc_signal 1. .9
FT /note="put. VPg binding site"
FT CDS 17. .1105
FT /codon_start=1
FT /product="hypothetical protein"
FT /note="ORF"
FT /db_xref="UniProtKB/TrEMBL:Q76WT2"
FT /protein_id="BAA00624.1"
FT /translation="MARTVIIHAVASTRSVTASPTTANGRGRASRKCTKNNAAVESSRP
FT RKLQRTAPIKTGTRDNRSYAQVVMENCHHSHQSKARSSEKFVAAKKVARPSVAVPSKLT
FT TGNKFDVLGFERHAIDRAVATSVPTKSVQEVVSVQKGTQYVVNHTGHSYGCSRKGNYAS
FT TSYRCCAKVVEEPVMEKKTVFTDVPDEAAELLRQEFLAKMPQLGHSVTLCPVGVDTLAW
FT GNCSELDSAVAAKPAWFGVPVKQQRKKMSRRDLRNLLSALRLARTTVNKSCSLGDAFMW
FT AWRTLGFGGAAPLPDLKGWELSHREERAAAPLHMYVLVIRCGGVGFSLWTGCFDAPGKF
FT IPAMVFHGFLLPLSYSWQSLEV"
FT polyA_site 1145
FT /note="polyadenylation site"
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SQ Sequence 1145 BP; 280 A; 276 C; 313 G; 276 T; 0 other;
d00722 Length: 1145 08-FEB-2010 Type: N Check: 3269 ..
1 ttgaaaaatc tagtcaatgg cgagaaccgt gataatccac gctgtggcct
51 caacaaggtc agttacagcc tctcctacta ctgccaatgg taggggacgt
101 gcgagcagga aatgcacgaa aaacaatgct gccgtggagt cctcaaggcc
151 acgtaaactg cagaggactg ctcccattaa gaccgggacg agggataata
201 ggtcttatgc tcaagtggtg atggaaaatt gtcaccactc ccatcaatcc
251 aaagcgcgct cgagcgaaaa atttgtggct gctaagaagg tagcccggcc
301 ctctgtggcc gtcccatcaa aattgacaac tgggaacaaa tttgatgttc
351 ttggctttga gcgccatgca attgaccgcg ctgtcgctac aagcgtgccc
401 accaaatccg ttcaggaggt ggtatctgtg cagaaaggca cacagtacgt
451 ggtcaaccat actggacaca gttacggctg ctcccgaaag ggtaattacg
501 caagcacctc ttacaggtgc tgtgcaaaag ttgttgagga gcccgtaatg
551 gaaaagaaga cagtcttcac agacgtccca gatgaggcgg ctgaattact
601 ccgacaggag ttcttggcca agatgcctca gctgggacac agtgtgacac
651 tgtgtccggt tggagtagac actcttgctt ggggcaattg ctccgagtta
701 gattccgctg tggctgcaaa gcccgcttgg ttcggtgttc cggtcaagca
751 gcagcggaag aagatgtcgc ggagagatct gcgaaatctt ctgtctgctt
801 tgcgtctcgc ccgcacgact gttaacaaat cgtgctcatt gggtgacgcc
851 ttcatgtggg cctggcgaac gctaggcttt ggtggtgcag cacccctccc
901 tgatcttaaa gggtgggagc tctctcatcg agaggagaga gcagctgcgc
951 ccctccacat gtatgtgcta gtcatacggt gcgggggagt gggtttttcc
1001 ctatggactg gctgctttga tgcgcctgga aaattcatac cagcaatggt
1051 attccatggg tttttattgc ccttgagtta tagttggcaa agtttggagg
1101 tttagaactt ttcatatcaa tgcaaatcaa tttgcatcca aactt