Sequence of DPV Miscanthus streak virus
Miscanthus streak virus - [91] DNA, complete genome.
ACC No: D01030
Dated: 2007-12-18 | Length: 2672 | CRC: -146416571
ID D01030; SV 1; circular; genomic DNA; STD; VRL; 2672 BP.
XX
AC D01030;
XX
DT 07-DEC-1991 (Rel. 30, Created)
DT 18-DEC-2007 (Rel. 94, Last updated, Version 6)
XX
DE Miscanthus streak virus - [91] DNA, complete genome.
XX
KW .
XX
OS Miscanthus streak virus - [91]
OC Viruses; ssDNA viruses; Geminiviridae; Mastrevirus.
XX
RN [1]
RP 1-2672
RA Chatani M., Matsumoto Y., Mizuta H., Ikegami M., Boulton M.I., Davies J.W.;
RT "The nucleotide sequence and genome structure of Geminivirus Miscanthus
RT streak virus";
RL Unpublished.
XX
CC Data kindly submitted in computer readable form by:
CC Masaaki Chatani
CC John Innes Institute
CC Colney Lane
CC Norwich NR4 7UH.
CC U.K.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2672
FT /organism="Miscanthus streak virus - [91]"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:268776"
FT CDS 219. .986
FT /codon_start=1
FT /note="ORF V2"
FT /db_xref="GOA:P29073"
FT /db_xref="InterPro:IPR000143"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="UniProtKB/Swiss-Prot:P29073"
FT /protein_id="BAA00833.1"
FT /translation="MVQKRKDLRRSDAGSAVRAKLHKASTGKAFPVGKRAPLQIRSYAW
FT ETPATATTPSGPISITDGTIFMCNTIDPGTGDDQRSRHTTMLYKMSLNVVLWPGATTAQ
FT IVGPFRVNFWLVYDAAPTGVVPKLTDIFDVAYPKWGNTWQVSRSNVHRFIVKRKWKVDY
FT QSSGVPVGKRQSSGVEYAPVNNVVECNKFFEKLRVKTEWANTSTGAIGDVKKGALYLCA
FT NTRQMPAGDSVTTSCTTMMQGSTRLYFKVLGNQ"
FT CDS complement(1159. .>1568)
FT /codon_start=3
FT /note="ORF C2 (ata start codon)"
FT /db_xref="GOA:Q67590"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:Q67590"
FT /protein_id="BAA00834.1"
FT /translation="QPNGPRRPRSIYICGPSRTGKTTWARNIGRHNYYNSTVDFTHYDK
FT DAIYNVIDDVPFKFLPQWKALVGAQRDYIVNPKYGKKKKIPGGIPSIILTNDDEDWIKD
FT MKPAQVEYLHANAHVHYMYEGQKFYVLPAEE"
FT CDS complement(1620. .2273)
FT /codon_start=1
FT /note="ORF C1"
FT /db_xref="GOA:Q67591"
FT /db_xref="HSSP:P27260"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:Q67591"
FT /protein_id="BAA00835.1"
FT /translation="MRAPASSAASNRPGPSNHPTPRWNSKQFFLTYPHCNLTPSELMKE
FT LFSRLTEKIPGYIKVSQEFHKDGDPHLHVLIQLNTKLCTRNPKFFDVQGFHPNIQPVRD
FT AEKVFGYISKTNGDSDEMGELQLRIKKPEKPTRDQRMAMIIASSTNRNEYLSMVRKEFP
FT FDWAIRLQQFEYSAAALFTEPPPVYQSPFPNEQIVCPPELVDIIDQEWNQVTTD"
FT CDS join(2357. .2672,1. .89)
FT /codon_start=1
FT /note="ORF V0"
FT /db_xref="UniProtKB/TrEMBL:Q67592"
FT /protein_id="BAA00836.1"
FT /translation="MGCVFIMGRRGSETNNITAPPPWPISRPLASVRCAFGPRSLPPLA
FT EDRTQAAVKWHRHLSVFALVPLVCGFKKRRRLRDRTKTKGTQVACLRTWVIKFCFVCKF
FT LWIPMVAVLAILMMVHCMVYLWHLLRCFAS"
FT CDS join(2671. .2672,1. .253)
FT /codon_start=1
FT /note="ORF V1"
FT /db_xref="UniProtKB/TrEMBL:Q67593"
FT /protein_id="BAA00837.1"
FT /translation="MDPYGSRPSHPDDGALHGILVAFIAVLCLIGCLWAAYRLFLKECL
FT TDCSQHTSSGVVAGPRPAATGPTAVVVHNGAEAQRSSAF"
XX
SQ Sequence 2672 BP; 575 A; 623 C; 732 G; 742 T; 0 other;
d01030 Length: 2672 18-DEC-2007 Type: N Check: 8244 ..
1 ggatccctat ggtagccgtc ctagccatcc tgatgatggt gcactgcatg
51 gtatacttgt ggcatttatt gcggtgcttt gcctcatagg ttgcctttgg
101 gcagcatacc gactgttcct taaggagtgc cttactgatt gcagtcagca
151 cacttcatca ggcgtcgtcg cgggtcctcg tccggctgca acaggtccta
201 ctgctgttgt tgtacataat ggtgcagaag cgcaaagatc ttcggcgttc
251 tgatgccggt tctgccgttc gggccaaact gcataaggcc tcgactggga
301 aggccttccc tgtagggaag cgggctcctc tgcagatacg gtcctatgca
351 tgggagacgc ctgccacggc gaccacccct tccggaccta tcagtattac
401 tgacggtacc atcttcatgt gtaacaccat tgaccctggg actggagacg
451 atcagagatc gcggcatacc acgatgctct ataagatgtc attgaacgtg
501 gtgctctggc ctggtgcgac tacggcccaa atagttgggc ctttccgcgt
551 gaacttctgg cttgtgtatg atgctgcccc gactggagtt gtcccgaagc
601 tgacggacat ctttgacgtg gcctatccga agtggggaaa cacttggcag
651 gtttcccgct ctaatgtgca taggttcata gttaagcgta aatggaaggt
701 ggactaccag tcctctggcg tccctgttgg caagagacag agcagcggtg
751 ttgaatacgc ccctgttaat aatgtggtgg agtgcaacaa gttcttcgag
801 aagctgcgtg tgaagaccga atgggcgaac acctctaccg gtgcaattgg
851 ggacgtgaag aagggtgcgt tgtacctgtg tgccaatacc cggcagatgc
901 ctgctggtga ctcagtcacc acgagttgta ccaccatgat gcaagggtct
951 acccgattgt acttcaaagt gctggggaac cagtaataat aaaaacttat
1001 ttattatata ttgcaaacct gtggattaca tgataatgtg agcgcattat
1051 gcgcgacaac aaactcaaga aattacataa atttgggggg taggggcaaa
1101 gcaggcggct atgggcgcgc ccgcgggcaa cacacttaaa aaaaacacaa
1151 caatagattc actcttcggc cggcaggacg tagaacttct gtccttcgta
1201 catgtaatgt acgtgggcgt tcgcgtgcag gtactccact tgtgcaggtt
1251 tcatgtcctt gatccagtct tcgtcgtcat tggttagaat gatggacggg
1301 attcccccag ggattttctt cttcttaccg tacttgggat tcactatgta
1351 gtcacgctgt gctcccacca gcgccttcca ctgcggcaag aacttgaaag
1401 gcacatcgtc gatgacgttg tagattgcat ctttgtcata gtgtgtgaag
1451 tctacggttg agttgtagta gttgtgcctc ccgatgtttc tggcccaagt
1501 ggtctttcca gttcggcttg ggccgcagat gtatatgctt cgtggtctcc
1551 gcggcccgtt aggctgtatt caaaccactg ttggtttgta agtattcaag
1601 aaatttgaaa gagtgaagct taatcggtag ttacctggtt ccattcctgg
1651 tctatgatgt caacgagctc cggcggacag acgatctgct catttgggaa
1701 cggtgactga tataccggag gtggttcggt aaacaaggct gctgcactgt
1751 attcaaactg ctggagtctg atggcccagt caaatgggaa ttctttacgg
1801 accatggaca ggtattcatt cctattggtg gaggaggcta ttatcatagc
1851 catcctttga tcacgggtag gcttctcggg tttcttgatc ctgagttgga
1901 gttcacccat ttcatcagag tcaccgttgg ttttggatat gtatccgaaa
1951 accttttcag catctctgac gggctgaatg tttgggtgga aaccctgaac
2001 atcaaagaac ttggggttcc ttgtgcatag tttggtgttt agctgtataa
2051 ggacatggag atgcgggtcc ccgtccttat ggaactcttg ggatacctta
2101 atgtatcctg gaattttctc ggtcaggcga gagaacaatt ccttcatcag
2151 ctcggatggt gttaggttgc agtgtggata ggtaaggaag aattgcttgc
2201 tgttccaacg tggtgttgga tggtttgaag gaccaggacg gttggatgct
2251 gcagatgatg caggtgccct catctctact actctatggg tgtggctccg
2301 atgctctcag aaaacttgct actggtttcg ctggtgccgg tgccacccct
2351 cgttagatgg gctgcgtatt tataatgggc cggcggggga gcgaaaccaa
2401 taatattacc gctccccctc cctggcccat tagtaggccc cttgcctcgg
2451 tgcgctgcgc ctttggtccc cgttccttgc cgcctttggc agaagatcgc
2501 actcaggctg ctgtaaaatg gcaccgccat ttgagtgttt ttgctttggt
2551 gcctttggtt tgcggcttta aaaagaggcg gaggctcaga gatcgcacca
2601 aaaccaaagg tacgcaggtt gcttgtcttc gaacttgggt cattaagttt
2651 tgcttcgttt gtaagttttt at