Sequence of DPV Cucumber mosaic virus satellite RNA

Cucumber mosaic virus satellite RNA genomic RNA, complete genome, clone: pUT119GG-S.

ACC No: D10038

Dated: 2007-12-18 | Length: 369 | CRC: -1990022568

                
ID   D10038; SV 1; linear; genomic RNA; STD; VRL; 369 BP.
XX
AC   D10038; X00817;
XX
DT   10-MAR-1992 (Rel. 31, Created)
DT   18-DEC-2007 (Rel. 94, Last updated, Version 11)
XX
DE   Cucumber mosaic virus satellite RNA genomic RNA, complete genome, clone:
DE   pUT119GG-S.
XX
KW   .
XX
OS   Cucumber mosaic virus satellite RNA
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded RNA satellites;
OC   Small linear single stranded RNA satellites.
XX
RN   [1]
RP   1-369
RA   Masuta C., Takanami Y.;
RT   "Determination of sequence and structural requirements for pathogenicity of
RT   a cucumber mosaic virus satellite RNA (Y-satRNA)";
RL   Plant Cell 1:1165-1173(1989).
XX
RN   [2]
RA   Hidaka S., Ishikawa K., Takanami Y., Kubo S., Miura K.;
RT   "Complete nucleotide sequence of RNA 5 from cucumber mosaic virus (strain
RT   Y)";
RL   FEBS Lett. 174:38-42(1984).
XX
RN   [3]
RA   Masuta C., Kuwata S., Takanami Y.;
RT   "Effect of extra 5' non-viral bases on the infectivity of transcripts from
RT   a cDNA clone of satellite RNA (strain Y) of Cucumber mosaic virus";
RL   J. Biochem. 104:841-846(1988).
XX
CC   Data kindly submitted in computer readable form by:
CC   Yoichi Takanami
CC   Life Science Research Laboratory
CC   Japan Tobacco Incorporated
CC   6-2 Umegaoka, Midori-ku
CC   Yokohama 227
CC   Japan
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .369
FT                   /organism="Cucumber mosaic virus satellite RNA"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="Cucumber mosaic virus strain Y"
FT                   /clone="pUT119GG-S"
FT                   /db_xref="taxon:12436"
FT   misc_feature    1. .369
FT                   /note="necrogenic property"
FT                   /note="pathogenesis"
FT   misc_difference 161
FT                   /replace="c"
FT                   /citation=[2]
FT   misc_difference 167
FT                   /replace="c"
FT                   /citation=[2]
FT   misc_difference 173
FT                   /replace="c"
FT                   /citation=[2]
FT   misc_difference 234
FT                   /replace=""
FT                   /citation=[2]
XX
SQ   Sequence 369 BP; 73 A; 84 C; 110 G; 102 T; 0 other;

d10038 Length: 369  18-DEC-2007  Type: N  Check: 3188  ..

       1  gttttgtttg atggagaatt gcgtagaggg gttatatctg cgtgaggatc
      51  catcactcgg cggtgtggga tacctccctg ctaaggcggg ttgagagtgt
     101  atctcggact ggaggcggga tgtctgcggg tgttccgtct gctgcccacg
     151  atggtgggag tcacccaagg ggtgactttt tcagctctgc atttctcatt
     201  tgagcccccg ctcagtttgc tagcaaaacc cggcacatgg ttcgccgtta
     251  ctatggattt cgaaagaaac actctgttag gtggtatcgt ggatgacgca
     301  cgcagggaga agctaaggct tatgctatgc tgatctccgt gaatgtctat
     351  acattcctct acaggaccc