Sequence of DPV Rice stripe virus
Rice stripe virus genes for hypothetical proteins, complete cds.
ACC No: D13787
Dated: 2008-02-16 | Length: 3514 | CRC: -509961579
ID D13787; SV 1; linear; genomic RNA; STD; VRL; 3514 BP.
XX
AC D13787;
XX
DT 28-SEP-1994 (Rel. 41, Created)
DT 16-FEB-2008 (Rel. 94, Last updated, Version 7)
XX
DE Rice stripe virus genes for hypothetical proteins, complete cds.
XX
KW .
XX
OS Rice stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-3514
RA Kawamata H.;
RT ;
RL Submitted (27-NOV-1992) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hitoshi Kawamata National Institute of Agrobiological Resources;
RL Kannondai 2-1-2, Tsukuba, Ibaraki 305, Japan
XX
RN [2]
RA Kawamata H.;
RT "Rice stripe virus genomic RNA, segment 2";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3514
FT /organism="Rice stripe virus"
FT /segment="2"
FT /isolate="O"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:12331"
FT CDS 81. .680
FT /codon_start=1
FT /product="hypothetical protein"
FT /note="ORF"
FT /db_xref="InterPro:IPR009965"
FT /db_xref="UniProtKB/TrEMBL:Q89717"
FT /protein_id="BAA02934.1"
FT /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDHYLNSLDAI
FT WLMGCCEEFTDPALRAHALAIATESNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL
FT ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV
FT TNGIPISKNFNEIALPDPSPSDDYVLVGAHECPILM"
FT CDS complement(980. .3484)
FT /codon_start=1
FT /product="hypothetical protein"
FT /note="ORF"
FT /db_xref="InterPro:IPR009547"
FT /db_xref="UniProtKB/TrEMBL:Q85430"
FT /protein_id="BAA02935.1"
FT /translation="MHFKSYFIYTTIFNMAWGAPIPFPDTHSWMRNRDREPSEIVKVPC
FT SARAPPCKLTYELNGYFIENGLICYNRASVNYFETCYTGNYDYKLPLHPSFSKFGGHVY
FT LSCDDAILQNVSLVGIQQTEYTSSPLLITNSNSEKISYSNLKTGFLGIVYAVETRACIQ
FT PDQAKKPEEIINHGVAIKPTCTDGVLYYINSACEVNVSDQTFSIPSCESVKLPTYDDTI
FT EVCDKGGCQNVTCHPGEICDKYERMDMIMRIKNYQCSHIYKYSLYSIILFFVIVIVFTL
FT ITIMNILFFLKPAFWLLKKVLYSMVGLCHRRPVVDEVSVDMSTVRVVDEAEEGLLVVED
FT SIAPNTNVSDKVKRKGRKVENGLIFIPYILMILLLVCSAEPCQDLVSSISNIERCTNNS
FT CDFISKMKLTLLNTPQDFCFKTSTDVYKIRFNSVRVMCLSVPLYYTNSFKRVISREEWK
FT CFEGEGCRTDGTHSIWGESTSLSFDYCVTDFHIFSYCPAYHYNWKRIEYEPTSSRACTI
FT MKCMDTKFEIVGYIQKNGHVLKELGGITSKYDSPLVSISLSNYNSARMPREYAECDGKA
FT YLRTANDLGSFDKELLGNIQCPTKEDAVVLSSKCKTKILSNEDLPVIRYIERDGVDMLE
FT HVKSEPLKDVLVSSSGISLGTLDLFPVELNLQFKEAITSIITSKISLNGTSCKITGIER
FT KFKKTTVSIESSNKVYLSDILACEGLAVCPMILNNIKKGTCITTTYYSVTVGSMIKCRF
FT IYSGDTLMCKYDVSPLEITVISPSLDVSSFEAVKTSTTNWMELLAGIVKDNPKLSLVAS
FT IIPIGLILKTIRSFLDDIRQVD"
XX
SQ Sequence 3514 BP; 1073 A; 737 C; 630 G; 1074 T; 0 other;
d13787 Length: 3514 16-FEB-2008 Type: N Check: 3841 ..
1 acacaaagtc tcgggtatat aagccacata tatcatataa atctaacaga
51 aatcgtccac ggagaatctc gtcttcagca atggcattac ttcttttcaa
101 tgatcactac tatggttttc tccataaata taaaaggcat actggatcat
151 atgataatct cttcaatttg aggtgctcta aagaagacca ctatttgaac
201 tctcttgatg ccatctggct catgggatgc tgtgaggagt tcacagatcc
251 agctcttaga gcacatgctc ttgccatagc aactgaatct aacataggtt
301 tggttaacaa taatgccgtg atatctgatg agaggttgaa gtgctggctc
351 tgtaaaaaac catctcacca acagactgag catctgaaac tgatcctgtt
401 acccaacttg gtcaacgggt ttcagtttgc tacagagtca tatcacatat
451 gcctgaagga tcactctgga gatgacccta cacaatatct tagtgaattc
501 tcctttccca caggattgag agcctactac aagccacatc agaagatgga
551 gcataaacat atagttgtaa ccaatggaat acccatctca aagaatttca
601 acgaaattgc tctccctgac ccatctccta gtgatgacta tgtcttggtt
651 ggagcacatg agtgccctat tctaatgtga acttggaaga tgatgttgac
701 tgtggtctac aggcacatac acacactggc cacaaacact acaatggtgc
751 tatgcaccaa tttataatct tatatcctag aaatggtgct acgcaccaca
801 tccggatggt gagcctagct cactttgatt attgagtaaa gtaatgaaaa
851 caaacaagta taattgtaac taaaataact ttctcactat tatgtgatca
901 atatgcttaa aactacacac tcaagcttaa gggaagatta ctaatataaa
951 tatgggcata catgagtgaa cctgttggct taatcaacct gtctgatgtc
1001 atctaggaaa ctcctaatag tcttcaaaat gagtcctatt ggtattattg
1051 aagctactag agataacttt gggttatcct tgactatccc ggctagcaat
1101 tccatccaat tggtggtgct ggtcttcaca gcttcaaaag agctaacatc
1151 aaggctcggc gatatcacgg tgatttccaa tggtgaaaca tcatacttgc
1201 acataagagt atcaccagag tatatgaatc tgcatttgat catggaacca
1251 actgtgaccg aatagtaagt tgttgttatg catgtgcctt ttttaatatt
1301 gttcagtatc atagggcaaa ctgccaatcc ctcgcaagcc aagatatcac
1351 tgagatagac tttgtttgaa gattcaatgc ttacagttgt cttcttaaat
1401 ttcctctcta ttccagtaat cttgcatgag gtcccattga gggatatctt
1451 actagttatt atactagtga tcgcttcctt gaattgcaag ttcagctcta
1501 ctgggaatag atccaaagtg cccagagata taccagagct agagaccaac
1551 acatccttta agggttcact tttcacatgc tctaacatat ccactccatc
1601 cctctctata tatctaataa ctggcaaatc ttcatttgaa agtatcttag
1651 ttttacactt actgctaaga acaacagcat cttctttagt tggacactgt
1701 atgttgccta gtaactcttt gtcaaaagat cctaaatcat ttgcagtccg
1751 taaataagct ttcccatcac actctgcata ttctctaggc attctggcac
1801 tattatagtt tgacaatgat attgaaacta aagggctatc atacttacta
1851 gtaatgcctc ctagttcttt caacacatgt ccattttttt gaatataccc
1901 cactatttca aacttagtgt ccatgcactt cataatggtg catgctctag
1951 aagatgttgg ttcatattct attctcttcc aattgtagtg gtatgctggg
2001 caataggaaa agatgtggaa atcagtgaca caataatcaa agctcagact
2051 agtggattcc ccccatatcg agtgtgttcc atctgttctg caaccttccc
2101 cttcaaagca tttccattcc tctctggaga tcaccctttt gaaactgtta
2151 gtataataca gaggcactga taagcacata actcgaacac tattaaatcg
2201 tatcttgtag acatcagtcg atgtcttgaa gcagaaatcc tgaggagtgt
2251 ttagtagggt caatttcatt ttagagataa agtcacaact attatttgtg
2301 catctctcta tattggaaat gcttgaaaca aggtcttgac agggttcagc
2351 agaacaaact aatagcaaga tcatcaatat atatggtatg aatatcagcc
2401 cattctctac ttttctaccc ttcctcttta ctttatcgga aacattagtg
2451 ttaggtgcaa tggagtcttc tacaactaac aggccctcct ctgcttcatc
2501 cactactcta actgttgaca tatctacaga tacttcatct acaacaggtc
2551 ttctatggca tagtccaacc attgaataaa gtaccttctt tagcagccag
2601 aatgcaggtt tcaggaaaaa taagatattc attatggtga tgagagtaaa
2651 tactatcact ataacaaaga acaagattat agagtacaat gaatatttat
2701 agatgtgaga gcattgataa ttctttatcc tcattatcat gtccattctc
2751 tcatacttgt cacaaatctc tcctgggtga caagttacat tttgacaacc
2801 acccttatca caaacttcaa tagtatcatc ataagttggt agtttgaccg
2851 attcacaaga agggatggaa aatgtttggt cactcacatt gacctcacat
2901 gcagaattga tataatacag cacaccatct gtgcaagtgg gcttgattgc
2951 aacaccatga tttatgattt cttctggttt cttagcttgg tcaggttgaa
3001 tgcatgccct agtctcaaca gcatacacta ttcccaagaa accagttttg
3051 agatttgagt atgaaatctt ttcagaattg gaattagtta tcaatagagg
3101 gcttgatgtg tattctgttt gctgtatgcc aaccagagac acattctgca
3151 gaatagcatc atcgcaactg agatagacat gaccaccgaa cttagagaaa
3201 gaaggatgga gaggaagctt gtaatcgtag tttccagtgt agcatgtctc
3251 aaagtaattc acactagccc tgttgtaaca aatcagacca ttttcaatga
3301 aatatccatt cagctcatat gtcaatttgc agggaggggc tctggcactg
3351 caagggacct tgacaatctc agatggttcc ctatccctgt tcctcatcca
3401 agaatgggtg tcagggaaag gtattggtgc accccacgcc atattaaaga
3451 ttgtggtgta gatgaaatat gatttaaaat gcatcttcga agaagttata
3501 cccagacttt gtgt