Sequence of DPV Potato virus X

Potato virus X mRNA for 12kDa nonstructural protein, 8kDa nonstructural protein, coat protein, complete cds.

ACC No: D87962

Dated: 2009-01-27 | Length: 1613 | CRC: 954374448

                
ID   D87962; SV 1; linear; mRNA; STD; VRL; 1613 BP.
XX
AC   D87962;
XX
DT   15-OCT-1996 (Rel. 49, Created)
DT   27-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Potato virus X mRNA for 12kDa nonstructural protein, 8kDa nonstructural
DE   protein, coat protein, complete cds.
XX
KW   .
XX
OS   Potato virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-1613
RA   Takahashi H.;
RT   ;
RL   Submitted (20-SEP-1996) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Hideki Takahashi Chiba University, Faculty of Pharmaceutical
RL   Sciences; 1-33, Yayoi-cho, Inage-ku, Chiba, Chiba 263-8522, Japan
XX
RN   [2]
RA   Takahashi H.;
RT   "Arabidopsis thaliana, new host model system for potato virus X";
RL   Unpublished.
XX
DR   RFAM; RF00184; PVX_3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1613
FT                   /organism="Potato virus X"
FT                   /host="Nicotiana tabacum, Solanum tuberosum"
FT                   /lab_host="Gomphrena globosa"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12183"
FT   CDS             324. .671
FT                   /codon_start=1
FT                   /product="12kDa nonstructural protein"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q77RX1"
FT                   /protein_id="BAA13513.1"
FT                   /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN
FT                   IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH
FT                   TCACGNNHSSH"
FT   CDS             604. .816
FT                   /codon_start=1
FT                   /product="8kDa nonstructural protein"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q98622"
FT                   /protein_id="BAA13514.1"
FT                   /translation="MEANTYLNAIILVLVATIIAVISTSLVRTEPCVIKITGESITVLA
FT                   CKLDAETIRAIADLKPLSVERLSFH"
FT   CDS             827. .1540
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q98623"
FT                   /db_xref="HSSP:P07270"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q98623"
FT                   /protein_id="BAA13515.1"
FT                   /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT                   AIVASNAVATNEDLSKIEAIWKDMKVPADTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT                   SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT                   FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT                   TGTTTAEAVVTLPPP"
XX
SQ   Sequence 1613 BP; 461 A; 394 C; 363 G; 395 T; 0 other;

d87962 Length: 1613  27-JAN-2009  Type: N  Check: 9217  ..

       1  ctacttggaa acatcatttc gagttccgag gaaagtggca gatttgatag
      51  caggctgtgg tttcgatttc gagaccaatt cacaagaaga agggcactta
     101  gagatcactg gtatattcaa agggccccta cttgggaagg tgatagccat
     151  tgacgaggag tctgagacaa cactgtccag gcatggtgtt gagtttgtta
     201  agccctgcca agtgactgga cttgagttca aagtagtcac tattgtgtct
     251  gccgcgccaa tagaggaaat tggccagtcc acagcttttt acaacgccat
     301  caccaggtca aagggattga catatgtccg cgcagggaca tagactgacc
     351  gctccggtca attctgaaaa agtgtacata gtattaggtc tatcatttgc
     401  tttagtttca attacctttc tgctttctag aaatagttta ccccacgtcg
     451  gcgacaacat tcacagcctg ccacacggag gagcttacag agacggcacc
     501  aaagcaatct tgtacaactc cccaaatcta gggtcacgag tgagtctaca
     551  caacggaaag aacgcagcat ttgctgccgt tttgctactg actttactga
     601  tctatggaag caaatacata tctcaacgca atcatacttg tgcttgtggc
     651  aacaatcata gcagtcatta gtacttcctt agtgaggact gaaccttgtg
     701  tcatcaagat tactggagaa tcaatcacag tgttggcttg taaattagat
     751  gcagaaacca tcagagccat tgccgatctc aagccactct ccgttgaacg
     801  gttaagtttc cattgatact cgaaagatgt cagcaccagc tagcacaaca
     851  caggccacag ggtcaactac ctcaactacc acgaaaactg caggcgcaac
     901  tcctgccaca gcttcaggac tgttcactat cccggatggg gatttcttta
     951  gtacagcccg tgccatagta gccagcaatg ctgttgcaac aaatgaggac
    1001  ctcagcaaga ttgaggctat ttggaaggac atgaaggtgc ccgcagacac
    1051  tatggcacaa gctgcttggg acttagtcag acactgtgct gatgtgggtt
    1101  catctgctca aacagaaatg atagatacag gtccctattc caacggtatc
    1151  agcagagcta gactggcagc agcaattaaa gaggtgtgca cacttaggca
    1201  attttgcatg aagtatgccc cagtagtatg gaactggatg ttaactaaca
    1251  acagtccacc tgctaactgg caagcacaag gtttcaagcc tgagcacaaa
    1301  ttcgctgcat tcgacttctt caatggagtc actaacccag ctgccatcat
    1351  gcccaaagag gggcttatcc ggccaccgtc tgaagctgaa atgaatgctg
    1401  cccaaactgc tgcctttgtg aagattacga aggccagggc acaatccaac
    1451  gactttgcca gcctagatgc agctgtcact cgaggtcgta tcactggaac
    1501  aacaaccgct gaggctgttg tcactctccc accaccataa ctacgtctac
    1551  ataaccgacg cctaccccag tttcatagta ttttctggtt tgattgtatg
    1601  aataatataa aag