Sequence of DPV Cauliflower mosaic virus

Cauliflower mosaic virus isolate Ca-CSh1 movement protein gene, partial cds; aphid transmission protein gene, complete cds; and DNA-binding protein gene, partial cds.

ACC No: DQ119039

Dated: 2006-01-01 | Length: 681 | CRC: 1655644443

                
ID   DQ119039   standard; genomic DNA; VRL; 681 BP.
XX
AC   DQ119039;
XX
SV   DQ119039.1
XX
DT   01-JAN-2006 (Rel. 86, Created)
DT   01-JAN-2006 (Rel. 86, Last updated, Version 1)
XX
DE   Cauliflower mosaic virus isolate Ca-CSh1 movement protein gene, partial
DE   cds; aphid transmission protein gene, complete cds; and DNA-binding protein
DE   gene, partial cds.
XX
KW   .
XX
OS   Cauliflower mosaic virus
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus.
XX
RN   [1]
RP   1-681
RA   Farzadfar S., Pourrahim R., Golnaraghi A.R., Ahoonmanesh A.;
RT   "Some properties of CaMV isolated from cauliflower in Shiraz, Fars province
RT   of Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-681
RA   Farzadfar S., Pourrahim R., Golnaraghi A.R., Ahoonmanesh A.;
RT   ;
RL   Submitted (07-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Virology, Plant Pests and Diseases Research Institute,
RL   Tabnak Av., Chamran High Way, P.O. Box: 19395-1454, Tehran 1985813131, Iran
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .681
FT                   /country="Iran"
FT                   /db_xref="taxon:10641"
FT                   /mol_type="genomic DNA"
FT                   /virion
FT                   /organism="Cauliflower mosaic virus"
FT                   /isolate="Ca-CSh1"
FT                   /specific_host="Brassica oleracea var botrytis"
FT   CDS             <1. .82
FT                   /codon_start=2
FT                   /note="Orf I"
FT                   /product="movement protein"
FT                   /protein_id="AAZ95263.1"
FT                   /translation="NTENELARVSQNIDLLKNKLKEICGE"
FT   CDS             79. .558
FT                   /codon_start=1
FT                   /note="Orf II"
FT                   /product="aphid transmission protein"
FT                   /protein_id="AAZ95264.1"
FT                   /translation="MSITGQPHVYKKDTIIRLKPLSLNSNNRSYVFSSSKGNIQNIINH
FT                   LNNLNEIVGRSLLGIWKINSYFGLSKDPSESKSKNPSVFNTAKTIFKSGGVDYSSQLKE
FT                   IKSLLEAQNTRIKNLEKAIQSLDNKIEPEPLTKEEVKELKESINSIKEGLKNIIG"
FT   CDS             560. .>681
FT                   /codon_start=1
FT                   /note="Orf III"
FT                   /product="DNA-binding protein"
FT                   /protein_id="AAZ95265.1"
FT                   /translation="MANLNQIQKEVSEILSDQKSMKMDIKAILDILGSQNPNKE"
XX
SQ   Sequence 681 BP; 290 A; 104 C; 109 G; 178 T; 0 other;

dq119039 Length: 681  01-JAN-2006  Type: N  Check: 7099  ..

       1  taatactgaa aatgaattag ctagggtaag ccaaaacata gatcttttaa
      51  agaataaatt aaaagaaatc tgtggagaat gagcattacg ggtcaaccgc
     101  atgtttataa aaaagatact attattagac taaaaccatt gtctcttaat
     151  agtaacaata gaagttatgt ttttagttcc tcaaaaggga acattcaaaa
     201  tataattaat catcttaaca acctcaatga gattgtagga agaagcttac
     251  tcggaatatg gaagatcaac tcatacttcg gactaagcaa agacccttcg
     301  gagtccaaat caaaaaaccc gtcagttttt aatactgcaa aaaccatttt
     351  taagagtggg ggggttgatt actcgagcca actaaaggaa ataaaatccc
     401  ttttagaagc tcaaaatact agaattaaaa atctagaaaa agcaattcaa
     451  tccttagata ataagattga accagagccc ttaactaaag aagaagttaa
     501  agagctaaaa gaatcgatta attcgatcaa agaaggatta aagaatatta
     551  ttggctaaaa tggctaatct taatcaaatc caaaaagaag tctctgaaat
     601  cctcagtgac cagaaatcca tgaaaatgga tataaaagct atcttagata
     651  tattaggatc tcaaaaccct aataaagaaa g