Sequence of DPV Squash mild leaf curl virus
Squash mild leaf curl virus isolate 4 segment DNA-B, complete sequence.
ACC No: DQ285015
Dated: 2005-11-21 | Length: 2588 | CRC: -1899898502
ID DQ285015 standard; circular genomic DNA; VRL; 2588 BP.
XX
AC DQ285015;
XX
SV DQ285015.1
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DT 21-NOV-2005 (Rel. 85, Created)
DT 21-NOV-2005 (Rel. 85, Last updated, Version 1)
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DE Squash mild leaf curl virus isolate 4 segment DNA-B, complete sequence.
XX
KW .
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OS Squash mild leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2588
RA Brown J., Idris A., Baumann K.;
RT "Characterization of Squash leaf curl and Squash mild leaf curl viruses:
RT phylogeny and reassortment between begomoviruses in the SLCV clade";
RL Unpublished.
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RN [2]
RP 1-2588
RA Brown J., Idris A., Baumann K.;
RT ;
RL Submitted (08-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
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FH Key Location/Qualifiers
FH
FT source 1. .2588
FT /country="USA:Imperial Valley, California"
FT /db_xref="taxon:223324"
FT /mol_type="genomic DNA"
FT /organism="Squash mild leaf curl virus"
FT /isolate="4"
FT /segment="DNA-B"
FT CDS 523. .1287
FT /codon_start=1
FT /product="BV1"
FT /protein_id="ABB76207.1"
FT /translation="MYSSRRGRPNVQRVSHLRRTYFKRPYYQTRGDEKRRPTAVNKTHD
FT DTKMSLQRLHEDQFGPDFVLGHNTALSTFITYPSIVKTEPNRTRSYIKLKRLRFKGTLK
FT IERGHGGTVMEDPTSKIEGVFSMVVVVDRKPHVNPSGRLHTFDELFGARIHSHGNLAIV
FT PALKDRFYIKHVMKRVLSVEKDTLMVDLQGSTTFSNKRFNCWSAFNDLERDSCNGVYAN
FT ISKNAILVYYCWMSDTPSKASTYVSFDIEYVG"
FT CDS complement(1477. .2358)
FT /codon_start=1
FT /product="BC1"
FT /protein_id="ABB76208.1"
FT /translation="MGSQLVPPPSAFNYIESHRDEFQLSHDLTEIVLQFPSTASQLTAR
FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWKLYYRVSESNVHQMTHFAKFKGKLKLSSAKHSVDIPFRAPTVKILT
FT KQFSEKDIDFWHVGYGKWERRLVKSASLSRYGLRGPIGINPGESWATKSMIGPSPTNAD
FT LEMDDEMLPYRELNRLGTTVLDPGESASIVGIQRSQSTITMSVSQLNELVKSTVHECIK
FT TSCIPSTPKSLN"
XX
SQ Sequence 2588 BP; 730 A; 531 C; 553 G; 774 T; 0 other;
DQ285015 Length: 2588 21-NOV-2005 Type: N Check: 1293 ..
1 accggatggc cgcaaatttt ttggtgtcct acttttccaa ggcccaagcc
51 catactatac acaagtgggc cggtgcttta atgaaagtag cagcccatca
101 gtgtttcacg gggaccacac agcactattg accaatcata tttaacctgt
151 caagtcatta taatttatcg tcgtacgaac attctggccc atttcacatg
201 gtgctgtgtc agatgttcta tctttaatac aaattgccaa agtgactagt
251 cgttctttaa tttgaaatct caaataaggc tggtccattg ctttaatata
301 tgtacgatca tcttttgtta gcacccacat gtgagcaatt tgaattaact
351 ttaatgtaac caattacatt tcaggcaagg agtctagcta tatatatcca
401 tatatgggtc gtgtctatta atacgacgga gggtaattgg ttatcacgtc
451 gaatacatgt atagatatac tgtctaacgt gtatattgtt gactcatcag
501 agcaaccaga gcactgtcga gcatgtattc gtctagacgc ggtcgaccca
551 atgttcaacg agtaagtcat ctacggcgta cttatttcaa acgtccatat
601 tatcagacac gtggtgatga gaagcgtcga ccgactgctg ttaataagac
651 tcatgacgac acaaagatgt cactacaacg tctacacgag gatcagtttg
701 gtccagattt cgttttaggt cataatacag ctttgtccac gtttatcacc
751 tacccaagta ttgttaagac tgaacccaat cggacgcggt cgtatatcaa
801 gttgaaacga ctgcgtttta aaggcacatt gaaaattgaa cgtggacatg
851 gtggtacggt gatggaagat ccaacgtcta agattgaagg ggttttctct
901 atggttgttg tggttgatcg taaaccacat gtaaaccctt ctggacgact
951 acatacattc gacgaactat ttggcgcgcg gatccatagt cacggtaatc
1001 tagctatcgt tcccgcgctc aaggatcgtt tttacattaa acatgtaatg
1051 aaacgcgttt tatctgtcga gaaggataca ttaatggttg atctacaggg
1101 atcgacaacg ttttccaaca agcgtttcaa ttgctggtct gcgtttaatg
1151 atcttgaacg ggattcatgt aacggggttt acgcaaacat aagcaagaac
1201 gccattctag tttattattg ttggatgtcg gatacgcctt ctaaggcatc
1251 cacatatgta tcatttgaca ttgaatatgt tggatgaata agaataatat
1301 attccacaag actatcacca caggacccag gatcatctat aaaacaagcc
1351 ccaattttct tattttaaaa ttgggagcgc agcggagcgc agcgggacac
1401 tcttcaaaat catgttcaac ccataaattt aatctgtcaa gttaactaca
1451 agataagttt atataataaa gaaactctaa tttagagatt ttggagtact
1501 cggaatacaa ctggtcttaa tgcattcatg aacagtcgac ttaactaact
1551 cgttcagctg cgacaccgac atggttatgg tagattgcga ccgttgtatt
1601 ccgacgatgg atgctgattc cccggggtct aatacagtcg tccctaacct
1651 gtttagttcc ctgtatggaa gcatctcatc gtccatctct aaatccgcat
1701 ttgtaggact tggaccaatc atacttttag tggcccaaga ttcaccagga
1751 ttaattccta ttgggcctct aagcccatat ctggaaagtg atgcggattt
1801 gaccagtctt ctctcccatt tgccgtatcc aacgtgccag aaatctatat
1851 ccttttcgct aaattgtttg gtaagtatct ttacggttgg tgcccggaat
1901 gggatgtcga cggagtgctt tgccgacgat agctttagct tgcccttgaa
1951 tttagcgaaa tgcgtcatct gatgaacatt cgattctgac actctatagt
2001 ataatttcca tggaattggg tctttgagag agaagaatga tgatgagaaa
2051 tagtggagat ctatgttgca tctaatcgga aacgtccagg atgcttgcag
2101 cgactcattg tccgtcatgc gtttgtcgtg gatctccact attacggtac
2151 cggaggcgtt tataggtacc tgctgtctgt attctatgac acaatggtcg
2201 atcttcatac aactacgact caggcgcgca gttaattgag atgcagtcga
2251 cggaaattgc agaacaattt ctgttaggtc gtgagacagt tgaaattcat
2301 cccgatgaga ttctatataa ttaaatgcgc ttggaggagg aactaattgt
2351 gaacccatct tattattagc tcgatctaac aattctggat gtgtaccagt
2401 gaccttaaat aaatttatag atgaggaacg aagtgagtta gggtttcagt
2451 ggcatatttg gtaaatatga accgggacac cagggggagc tctctctaaa
2501 acctattatt gctggtgtcc tggtgtccca tttatacaac tctctgggga
2551 ggacaccagg ggcaaaatcg gccatccgca ataatatt