Sequence of DPV Rice stripe virus

Rice stripe virus isolate AHF2-04 coat protein (CP) gene, complete cds.

ACC No: DQ289590

Dated: 2005-12-08 | Length: 969 | CRC: 1571895763

                
ID   DQ289590   standard; genomic RNA; VRL; 969 BP.
XX
AC   DQ289590;
XX
SV   DQ289590.1
XX
DT   07-DEC-2005 (Rel. 86, Created)
DT   08-DEC-2005 (Rel. 86, Last updated, Version 2)
XX
DE   Rice stripe virus isolate AHF2-04 coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Zhang S., Li L., Wang X.;
RT   "Molecular variability of the coat protein gene of Rice stripe virus in
RT   China";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Zhang S., Li L., Wang X.;
RT   ;
RL   Submitted (14-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Plant Protection, China Academy of Agricultural Sciences, No.2
RL   Yuanmingyuan West Street, Beijing 100094, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /country="China"
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="AHF2-04"
FT   gene            complement(1. .969)
FT                   /gene="CP"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ABB92751.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLTDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFLEDEAEGADD"
XX
SQ   Sequence 969 BP; 228 A; 247 C; 198 G; 296 T; 0 other;

dq289590 Length: 969  08-DEC-2005  Type: N  Check: 1264  ..

       1  ctagtcatct gcaccttctg cctcgtcctc gaggaactct ttcaccaacc
      51  cgctgacttc agatgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agtttgctct gttgagccaa gtacagcctt gtctgattcc cataagtgct
     151  gatcgtattg acagacatac cagccagcgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc
     251  ttcttcttgt cagtcaggtt ctttgacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcctt tgtaagacca cgctccttct
     351  tcttaccctc tggcatggtc tttttggtta tttggaagga gtgaatgatg
     401  tgcacaacaa acaaaatgtg acttagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tgtcacatcc tgttagtccc aggtcagagg agtctacagc catcttaaca
     551  ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc
     601  cagccttcca agtgtgatag cattggcatt tgtccccacc gaggacacta
     651  tcccatacct cgacaccaag gtcgaagcct ctgtgcttcc agctgccact
     701  ttcactttct tagtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatt
     851  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ctggcttgtt ggtacccat