Sequence of DPV Desmodium leaf distortion virus

Desmodium leaf distortion virus coat protein (AV1) gene, complete cds.

ACC No: DQ318930

Dated: 2007-11-01 | Length: 756 | CRC: -283326828

                
ID   DQ318930; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   DQ318930;
XX
DT   02-DEC-2006 (Rel. 90, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 2)
XX
DE   Desmodium leaf distortion virus coat protein (AV1) gene, complete cds.
XX
KW   .
XX
OS   Desmodium leaf distortion virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
XX
RN   [1]
RP   1-756
RX   PUBMED; 17682933.
RA   Hernandez-Zepeda C., Idris A.M., Carnevali G., Brown J.K.,
RA   Moreno-Valenzuela O.A.;
RT   "Preliminary identification and coat protein gene phylogenetic
RT   relationships of begomoviruses associated with native flora and cultivated
RT   plants from the Yucatan Peninsula of Mexico";
RL   Virus Genes 35(3):825-833(2007).
XX
RN   [2]
RP   1-756
RA   Hernandez-Zepeda C., Idris A.M., Brown J.K., Moreno-Valenzuela O.A.;
RT   ;
RL   Submitted (30-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL   UBBMP, Centro de Investigacion Cientifica de Yucatan, Calle 43 No. 130,
RL   Merida, Yucatan 97200, Mexico
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Desmodium leaf distortion virus"
FT                   /segment="DNA-A"
FT                   /specific_host="Desmodium glabrum (Mill.) DC."
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Yucatan"
FT                   /clone="pDeLDV362"
FT                   /db_xref="taxon:361731"
FT   gene            1. .756
FT                   /gene="AV1"
FT   CDS             1. .756
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A0SEC7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A0SEC7"
FT                   /protein_id="ABC61476.1"
FT                   /translation="MPKRDAPWRSMAGTSKVSRAANYSPRAGNGPRLNRASEWVNRPMY
FT                   RKPRIYRTLRSPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHKFYAKVTGGQYASNEQAIVKRFWRVNTHVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATLKIXIYFYDSIMN"
XX
SQ   Sequence 756 BP; 197 A; 164 C; 200 G; 194 T; 1 other;

dq318930 Length: 756  01-NOV-2007  Type: N  Check: 7647  ..

       1  atgcctaagc gcgatgcccc gtggcgctct atggctggga cctcaaaggt
      51  tagtcgggct gctaactatt ctcctcgtgc aggtaatggc ccaaggttga
     101  acagggcctc agaatgggtt aacaggccca tgtataggaa gcccaggatc
     151  taccggactt tgaggtcccc tgatgtgccc agaggctgtg aaggtccttg
     201  taaggtccag tcctatgaac agcgccacga catatcacac gtcgggaagg
     251  tcatgtgcat atctgatgtg acacgtggta atggcattac ccaccgtgtg
     301  ggtaagcgtt tttgtgttaa gtctgtgtat attctaggta aggtctggat
     351  ggatgagaac atcaagttga agaatcacac gaacagtgtg atgttctggt
     401  tagtcaggga ccgtagaccc tacggtactc caatggattt cgggcaggtg
     451  ttcaacatgt tcgataacga gcctagcact gccactgtta agaacgatct
     501  ccgtgatcgt taccaggtga tgcacaagtt ctatgccaag gtgacaggtg
     551  gacagtacgc cagcaatgaa caggcgatag tcaagaggtt ctggagggtc
     601  aacactcatg tggtctataa tcatcaggag gctgccaagt atgagaatca
     651  tacggagaac gccctattat tgtatatggc atgtactcat gcctctaacc
     701  ctgtatatgc aactctgaag attcnaatct atttttatga ttcgataatg
     751  aattaa