Sequence of DPV Ippy virus
Ippy virus strain Dak An B 188 d segment S, complete sequence.
ACC No: DQ328877
Dated: 2006-06-28 | Length: 3366 | CRC: -1739551226
ID DQ328877; SV 1; linear; genomic RNA; STD; VRL; 3366 BP.
XX
AC DQ328877;
XX
DT 07-MAR-2006 (Rel. 87, Created)
DT 28-JUN-2006 (Rel. 88, Last updated, Version 3)
XX
DE Ippy virus strain Dak An B 188 d segment S, complete sequence.
XX
KW .
XX
OS Ippy virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses.
XX
RN [1]
RP 1-3366
RX PUBMED; 16494913.
RA Emonet S., Lemasson J.J., Gonzalez J.P., de Lamballerie X., Charrel R.N.;
RT "Phylogeny and evolution of old world arenaviruses";
RL Virology 350(2):251-257(2006).
XX
RN [2]
RP 1-3366
RA Emonet S., Lemasson J.-J., Gonzalez J.-P., de Lamballerie X., Charrel R.;
RT ;
RL Submitted (02-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL Unite des Virus Emergents, Faculte de Medecine de Marseille, Universite de
RL la Mediterranee, 27 boulevard Jean Moulin, Marseille 13005, France
XX
FH Key Location/Qualifiers
FH
FT source 1. .3366
FT /organism="Ippy virus"
FT /segment="S"
FT /strain="Dak An B 188 d"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:55096"
FT gene 50. .1537
FT /gene="GPC"
FT CDS 50. .1537
FT /codon_start=1
FT /gene="GPC"
FT /product="glycoprotein precursor"
FT /db_xref="GOA:Q27YE4"
FT /db_xref="UniProtKB/TrEMBL:Q27YE4"
FT /protein_id="ABC71140.1"
FT /translation="MGQIITFFQEVPHIIEEVMNIVLITLSLLAILKGVYNVMTCGLIG
FT LISFLLLCGKSCSLIYKDTYNFSSIELDLSHLNMTLPMSCSRNNSHHYVFFNGSGLEMT
FT FTNDSLLNHKFCNLSDAHKKNLYDHALMGIVTTFHLSIPNFNQYEAMACDFNGGNISIQ
FT YNLSHNDRTDAMNHCGTVANGVLDAFYRFHWGRNITYIAQLPNGDGTGRWTFCYATSYK
FT YLVIQNISWADHCQMSRPTPIGFASILSQRIRSIYISRRLMSTFTWSLSDSSGTENPGG
FT YCLTRWMLFAADLKCFGNTAIAKCNLNHDEEFCDMLRLIDFNKQALKTFKSEVNHGLQL
FT ITKAINALINDQLIMKNHLRDLMGIPYCNYSKFWYLNDTRTGRVSLPKCWMISNGTYLN
FT ETHFSDEIEQEADNMITEMLRKEYQERQGKTPLGLVDLFIFSTSFYSITVFLHLIKIPT
FT HRHIVGQGCPKPHRLNSRAICSCGAYKQPGLPTKWKR"
FT gene complement(1596. .3308)
FT /gene="NP"
FT CDS complement(1596. .3308)
FT /codon_start=1
FT /gene="NP"
FT /product="nucleocapsid protein"
FT /db_xref="GOA:Q27YE3"
FT /db_xref="UniProtKB/TrEMBL:Q27YE3"
FT /protein_id="ABC71141.1"
FT /translation="MANSKEVKSFLWTQALRRELGQYCSTVKSSIIKDAQSLLHSLDFS
FT EVSNIQRLMRKDKRNDSDLKRLRDLNQAVFNLVELKSTQQKNVLRVGKLTSDDLLVLAA
FT DLDRLKNKVMRTERPQTLGVYMGNLTNQQLDQRKRLLDMIGISNARNAPRPGADGVVRV
FT WDVKDSSLLNNQFGTMPSLTLACMSKQGQYELNDVVQSLTDLGLVYAAKYPNAMDLEKL
FT TQAHPVLSIIDVSKSSINVSGYNFSLSAAVKAGACMLDGGNMLETLKVTPQNLEDILAS
FT MLKVKRAHSMFVSDTPGDRNPYENLLYKVCLSGNGWPYIACRTSLTGRAWDNTVVDLGP
FT PIDLSQNKQMSPAKPKGAGHGMPSGLTMSQILALKDLMAAVDPNAKTWIDIEGRAEDPV
FT EIAFYQPQTGAYIHFYREPTDAKQFKQDSKYSHGIDIGDLFNVQPGLTSAVLELLPPNM
FT VLTCQGSEDIRRLLDSQGRKDIKLIDVLMSKSEARKFEDEVWDKFGFLCKIHTGHVVEK
FT KKRGNKEEITPHCALLDCLMYEAASTGRFSPGSIRAVLPRDMVFRAVTEKVAL"
XX
SQ Sequence 3366 BP; 889 A; 797 C; 714 G; 966 T; 0 other;
dq328877 Length: 3366 28-JUN-2006 Type: N Check: 6950 ..
1 cgcacagtgg atcctaggca ttttggttgc gcttatttct tgtccaatta
51 tgggacagat aataaccttc tttcaggaag tgcctcacat tatagaggaa
101 gtcatgaaca ttgttctgat caccctatcc ctcttggcta tcttgaaggg
151 tgtgtacaat gtcatgactt gtggtctgat tggattgatt tcctttctct
201 tactgtgtgg gaagtcctgc tctctaatct acaaggacac atataacttc
251 tcatccattg aacttgacct ctcacacctc aacatgacat tgcccatgtc
301 ctgcagccga aacaactcac accactatgt cttcttcaac ggatctggct
351 tagagatgac attcactaac gattcacttc ttaaccacaa attctgcaat
401 ctttcagacg cccataaaaa gaatctttac gatcatgcgc taatgggcat
451 tgtcacaact ttccacttgt caatcccgaa cttcaatcaa tacgaagcaa
501 tggcctgtga cttcaatgga gggaatatta gcattcaata caacttgagc
551 cacaatgatc gaacagatgc aatgaaccac tgtggcactg tagctaatgg
601 tgtactggat gctttttata ggttccattg gggcagaaat ataacctaca
651 tcgctcagtt gccaaatggc gacggcactg gcagatggac attctgttat
701 gccacaagtt ataagtacct ggttatccaa aacattagct gggctgatca
751 ttgtcaaatg tcaagaccaa ctcccattgg ctttgctagc attctgagcc
801 aacggattag gagcatttac atttcaagac gactgatgag cacattcact
851 tggtctctat ccgacagttc aggtactgag aatccaggtg gctattgtct
901 caccagatgg atgctttttg cggctgactt gaaatgcttt ggaaacacag
951 ccattgccaa atgtaacctg aatcatgatg aagagttctg cgacatgttg
1001 aggcttattg acttcaacaa gcaagccttg aaaacattca aatcggaggt
1051 taaccatggt ctacaactaa ttacaaaggc gattaatgcc ttgatcaatg
1101 accaactcat tatgaagaat cacttaaggg acctaatggg tatcccttat
1151 tgcaattatt caaaattctg gtatctaaat gacacaagaa caggtagagt
1201 ctctctgcct aagtgctgga tgatcagcaa cgggacctat ctaaatgaga
1251 ctcatttttc tgatgagatt gaacaggaag cagacaatat gatcacagaa
1301 atgttgagaa aagagtatca agaaagacaa gggaagaccc cattgggtct
1351 agttgatctt tttattttta gcacaagctt ttattcaatc acagtgttcc
1401 tccatctcat aaagattcca acgcacagac acatcgtggg acaagggtgt
1451 cccaagccac acagactaaa cagtagagca atctgctcct gtggtgccta
1501 taaacagccg ggactaccca ccaagtggaa gcgctgatct ccacaggggc
1551 ccccgtgacc caccgccgaa aggcggtggg tcacgggggt gccacttaca
1601 gggcaacctt ctctgtcact gctctaaaga ccatgtctct gggcaacaca
1651 gccctgatgg aacccgggct gaatctgcct gtggatgctg cttcatacat
1701 caggcaatcc aacaatgcac aatggggcgt tatctcctcc ttgttgcctc
1751 tcttcttctt ttcaacaacg tgaccagtat gaattttgca taaaaatccg
1801 aatttatccc acacttcatc ttcaaatttt ctggcctcag atttggacat
1851 cagtacatca atgagcttga tgtcctttct cccctgagaa tccaggagcc
1901 tccttatgtc ttcagaccct tggcaggtta agaccatatt tggaggtaaa
1951 agctccaaaa ccgctgatgt taacccaggc tgcacgttga agagatctcc
2001 aatgtcaata ccatgggagt atttggagtc ctgtttgaac tgtttggcgt
2051 ctgtgggttc tctgtagaag tgtatgtaag ctcctgtttg tggctggtaa
2101 aaggctatct ccacggggtc ctcagctctc ccttctatgt caatccacgt
2151 cttggcattt ggatccacgg cggccatcag atctttaaga gctagtatct
2201 gagacattgt gagaccagaa ggcatcccgt gtccggcccc tttgggttta
2251 gctggactca tctgtttgtt ttgggacaga tcaatgggtg gtccgagatc
2301 aactacagta ttgtcccaag cccttcctgt cagacttgtt ctgcatgcta
2351 tataaggcca accgttgcca gagagacata ctttgtacag cagattttca
2401 tatgggtttc tgtcgcctgg tgtatctgac acaaacatac tgtgggctct
2451 ttttactttc aacatagaag ctaatatgtc ctccaagttt tggggagtca
2501 ccttcaatgt ctcaagcatg ttaccaccat ctagcataca tgcgcctgcc
2551 ttcactgctg cactcaagct gaagttgtac ccagagacat tgatagatga
2601 tttggaaaca tcaataatgc ttaagactgg gtgtgcttga gttagtttct
2651 caagatccat ggcattagga tacttggctg cgtaaactag accaagatca
2701 gtgagagatt gcacaacatc atttaactca tactgtccct gtttactcat
2751 acaggctaga gtgagactag gcatagtccc aaactggttg tttaagagtg
2801 aggagtcttt cacatcccac acccgcacca ctccgtctgc accaggcctg
2851 ggtgcattcc tcgcattgct aatgcctatc atgtccagaa gccgttttct
2901 ctgatcaagt tgttgatttg ttagattgcc catatagaca ccaagagttt
2951 gtggtctctc agttctcatc actttgttct tcagtctgtc caagtcagct
3001 gcgagaacca agaggtcgtc agacgttagc ttcccaactc tcaaaacatt
3051 cttctgctgt gtagatttca gttcaacaag gttgaacact gcttggttta
3101 ggtcccttag cctcttgagg tctgagtcat tccttttgtc tttcctcatg
3151 agcctttgaa tattggagac ttctgagaag tccagactgt gcaggagaga
3201 ctgggcatcc ttgataatgg aggattttac agtactacag tactgcccaa
3251 gttctctcct gagtgcctgg gtccaaagga atgacttcac ttctttggaa
3301 ttggccattg ctggagattt ttgacagtga aaaagcgcaa tcaaattgcc
3351 taggatccac tgtgcg