Sequence of DPV Ippy virus
Ippy virus strain Dak An B 188 d segment L, complete sequence.
ACC No: DQ328878
Dated: 2006-06-28 | Length: 7316 | CRC: 523586350
ID DQ328878; SV 1; linear; genomic RNA; STD; VRL; 7316 BP.
XX
AC DQ328878;
XX
DT 07-MAR-2006 (Rel. 87, Created)
DT 28-JUN-2006 (Rel. 88, Last updated, Version 3)
XX
DE Ippy virus strain Dak An B 188 d segment L, complete sequence.
XX
KW .
XX
OS Ippy virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses.
XX
RN [1]
RP 1-7316
RX PUBMED; 16494913.
RA Emonet S., Lemasson J.J., Gonzalez J.P., de Lamballerie X., Charrel R.N.;
RT "Phylogeny and evolution of old world arenaviruses";
RL Virology 350(2):251-257(2006).
XX
RN [2]
RP 1-7316
RA Emonet S., Lemasson J.-J., Gonzalez J.-P., de Lamballerie X., Charrel R.;
RT ;
RL Submitted (02-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL Unite des Virus Emergents, Faculte de Medecine de Marseille, Universite de
RL la Mediterranee, 27 boulevard Jean Moulin, Marseille 13005, France
XX
FH Key Location/Qualifiers
FH
FT source 1. .7316
FT /organism="Ippy virus"
FT /segment="L"
FT /strain="Dak An B 188 d"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:55096"
FT gene 149. .454
FT /gene="Z"
FT CDS 149. .454
FT /codon_start=1
FT /gene="Z"
FT /product="Z protein"
FT /db_xref="GOA:Q27YE2"
FT /db_xref="UniProtKB/TrEMBL:Q27YE2"
FT /protein_id="ABC71142.1"
FT /translation="MGQNQSRDKQKAIQNQPKDTGNRADIIPDATGMGPEFCKSCWFER
FT RSLVACNNHYLCMNCLTLLLSVSERCPICKLPLPQKLKLTSSPSAPPSPSPPPYSP"
FT gene complement(619. .7245)
FT /gene="L"
FT CDS complement(619. .7245)
FT /codon_start=1
FT /gene="L"
FT /product="L protein"
FT /db_xref="GOA:Q27YE1"
FT /db_xref="UniProtKB/TrEMBL:Q27YE1"
FT /protein_id="ABC71143.1"
FT /translation="MEESLRETKLLISRYLRQDERIARQKLAFLGQSEPRSLLIEGLKL
FT LSLCIEIDSCDTNCCTHNTEGQSVENFLFQNHILCPSLPLVVPDGMKLNGNILIILECF
FT VRSNPTNFQQKYQEDSVKLDSLKGDLERAGISLIPIIDGRTSYYNSLMEEWVCDQFRHN
FT LFKLLEFEQENNALFEESEYLRLCESLNVSGGRASGAQGLHSLLDCRGEHYNEILKACH
FT IGIDPSIGGVELKGQIENLYQVFRQKLKKGVIKHQFRKVDQKSLLKEYCEMYKGIGICG
FT VEETTVDALAAELPNISPILRYIHLRIDSESNAEVNEISNLPTGLRSAFNKVKSLKVLN
FT TRRKLLLLIDTIILMSHCYVRELFPTLCERDWLGSSFFSVGDRLVSVGAIQHDLSKWLK
FT RRLKANGGVGQKSTELHKMINTMIQKSSKALGDVGLSFESYGVSFDFLNKVGLEEIMRF
FT KIVGVTPTISYIKTNQQPPIPLREFSAEDDSDLKMLSSLSLSLVNSMKTSSTVKTRQNA
FT MGRERYRVVQCKECYYQELGNEYRDLVLLYQKTGEGSKCYSVNSKRVGEICSFYADPKR
FT YFCPIFSENVITKVIDTMMTWLMGIVELEDSLRDIKKLTKMILLVILCQPSKRSQKLLQ
FT NLRYFIMAFVSDYHHVELFDKLREELITDAEFFLFKLLGKILTILLNDEVSTMLNNRFK
FT FILNISYFCHFITKETPDRLTDQIKCFEKYLEPKIQFGSLTVNPKETPTDEEKDDILHG
FT VNMFLSKKTCDEVDDPPSKKPGVSKKVFSLMLSAFNSGLLFKESELKKGMKDPLEDSGS
FT ATALDLASNKSVVINKYTKDGRVLDYNYDKLVSVAVCQLSEIFSRKGKYLLNKEDYDYK
FT IQEVLSSLVIGSSKSEQPEEILDVDSDYMDQLKASVERVLDQYKPNRGVRSQNNDKSVN
FT DLKIIVEDELSRRLILGELSYHLVEDFDKGLLSENFYKEVCEKAFNNKDFRTKYFYDSE
FT AGLCPIEKMTQALATRTYMSGEYFHCFKSLLLQMDANKLSGKYSHYKSQNLNFRFDHGR
FT LMDDSRISERESNSEALSKALSLVNCLTSALKNLCFYSQESPSSYTETGPDTGRMKFSL
FT SYKEQVGGNRELYIGDLRTKMFTRFVEDYFESYTKQLEGSCLNNEKEFEKAILGMKLGV
FT SLAHASYSLDHSKWGPMMCPFLFLMLYRNLSPKLKGTEVELKGCDNISTILSWHIHKLV
FT EVPFNVVTAMMRSYIKRKLGIMKDTSQTITESLFFSEFERGVIPSHFSSVLDMGQGILH
FT NTSDFYGLISERFINYALRLVSGNPIEAYTSSDDQISLFSHKFTELMDTDPEEFLIYLE
FT FHNYLSSLLNKFISPKSVVGRFVAEFKSRFYVWGDEVPLLSKFVAASLHNIKCKEPHQL
FT AETVDTIIDQAVANGVPVSVCNEVQKRTLRLLEFSKYPIDPFLLHSDSDVKDWVDGNRG
FT YRIMRVIEQTLPEGTASVRSLLRILYNKLKSNELHEEFASAYLSQNRSETLVGLAELMG
FT VKPPSTEDLMICWLNLTACHPLRMVLRQKVIYPSALNLEEEKVPTLIRTLQNKLSSGFT
FT RGAQKLLSEAVNKSAFQSSIASGFVGLCKTLGSKCVRDPERESHYIKSIIQYLQTHCNV
FT KPLNKGHLNLWVYESKTDDTQSASVKPWQIELLRPLLWDYLCIALSTSLEIGPWVLGEP
FT VFKVKSDFWKPRPCDYFPLRPAHNRILEDRIGMNHIIHAVRRLYPEMFEKHLLPYMSDL
FT AAMKLKWSPRIKFLDLCVTLDVNCEALSLISHVVKWKREEHYIVLSDDLLVSHDRKHTT
FT LMDETVVSTSDVADNFLKQIYFESFVKPFVATSRTLGSFSWFPHRSSLPQGEGIERLGP
FT FSTFIEKVVFKGIERPMYRYDLFMGYSWLDYEIELAHLNQSQLIASGLTEESCFEDVDQ
FT FWHYLSTLKVGSVKLSKTVRLTQKTQGKLQGQKFSVHLNFTGFITNSCTFVPKQLEVLY
FT SGPVDEHFVIDCWSLLKSDREFKAGASEWFVHSDVVDAYISTASPSSEAYPLDVWLEPD
FT LLELSVSDISKVGPEVNIVPLVVEDGHLLELKEKVAIINPVILDQDIEVFINELKEDHW
FT DLLVCKFADILKHRQCCNLYLINVDILTIALRILNDKAEEFISKSMQEIDQWFDFKGYS
FT LCFSKSRRQVMRHSSTGTMRLKGRLCQPAFYVEVVEEID"
XX
SQ Sequence 7316 BP; 2198 A; 1651 C; 1258 G; 2209 T; 0 other;
dq328878 Length: 7316 28-JUN-2006 Type: N Check: 8866 ..
1 cgcaccgggg atcctaggca atttggtgtg tcatttctat accaatcaag
51 cctgatttcc aaagcactca cacaagtccc gcaaccacca cacctacaag
101 gacccgccaa cagtcccgcc aaatcgctag gccatcaccc aacccagcat
151 gggacagaac caaagcagag acaaacaaaa ggccatccaa aatcagccca
201 aagacacagg gaacagagca gacatcattc cagatgcaac aggcatgggg
251 ccagagtttt gcaagagctg ctggtttgag cgtaggagtc ttgttgcttg
301 taacaatcac tacctttgca tgaactgcct gacattgtta ctaagtgtct
351 cagaaagatg tccaatttgc aaactgcctc tgccacaaaa actgaaacta
401 acatctagtc caagtgcccc tccatcaccc agtccaccac catactcccc
451 ttaagcccca aacaacagcg gacccaaaca aaaaacaaga aacaaaaaac
501 aaaccaaaaa caaaggaaaa ggccaaaacc aaaaaacaac cacaaccacc
551 ccctcccccg caagggggag gggggccccg ccgggccccc cctccccccc
601 cctgggggga ggagatgtct agtctatctc ttcaacaact tcgacataaa
651 atgccggttg gcagagtcta cccttgagcc tcattgtgcc cgttgatgag
701 tgcctcatca cttgtctcct acttttacta aaacacagtg agtagccttt
751 aaaatcaaac cattgatcaa tctcttgcat tgattttgaa atgaactcct
801 ctgctttatc attaaggatt cttagtgcaa tggttaagat gtccacatta
851 ataaggtaca aattgcaaca ttgtctatgt ttcaatatat ctgcaaactt
901 gcacaccaac aagtcccaat gatcttcctt cagttcatta atgaaaactt
951 caatatcttg atccagaatg acagggttga tgatggctac cttttctttg
1001 agttctaaca gatgcccatc ttcaacaaca aggggcacaa tattgacttc
1051 tggtccaact ttcgagatgt cagatacgga gagttcaagc aaatctggtt
1101 ccaaccatac atcaagtgga taagcctcag aagatggaga agctgttgaa
1151 atgtaagcat ctacaacatc tgaatgaacg aaccactcag atgctccagc
1201 tttaaattcc ctatctgact tcaataatga ccagcagtca atcacaaagt
1251 gctcatccac agggcctgag tacagcactt ctaattgctt aggtacgaaa
1301 gtacacgagt ttgttataaa tccggtaaaa ttcaaatgaa ctgagaactt
1351 ctggccttgt agcttccctt gagtcttctg tgttagtcta acagtttttg
1401 acaacttaac agaccctacc tttaaagtgg agagataatg ccagaattga
1451 tcaacatctt caaaacagct ttcctctgtc agcccagatg caattagctg
1501 ggactgattg aggtgtgcca actctatctc gtaatccaac catgaatagc
1551 ccatgaataa atcatatcta tacataggcc tctctatgcc tttaaataca
1601 actttctcaa tgaatgttga aaaaggccct agtctttcaa tgccctcacc
1651 ttgaggtagt gatgatctgt gagggaacca agaaaatgat ccaagtgtcc
1701 tagaggttgc aacaaagggt ttgacgaaag actcaaaata gatttgtttc
1751 aggaagttgt cagcaacatc agaagtactc accactgtct catccataag
1801 tgtagtatgt ttacgatcat gagaaactaa aagatcatca gacaaaacaa
1851 tgtaatgctc ttctcttttc catttaacca catgtgaaat taaggacagt
1901 gcctcacaat tcacatcaag agttacacac aaatccaaaa acttaattct
1951 tggagaccac ttcaacttca tggcagccaa atcgctcatg taaggcaaaa
2001 gatgcttctc aaacatctca gggtagagcc ttctaactgc atgaattatg
2051 tggttcattc caatcctatc ttccaaaatt cggttatgag caggcctcaa
2101 aggaaaatag tcacagggtc ttggtttcca aaagtcagat ttcaccttga
2151 acacgggctc acctaggacc cagggaccaa tctctagaga agttgacaat
2201 gctatgcaga ggtagtccca tagaagaggc ctcaagagtt caatttgcca
2251 gggttttaca gaggctgact gtgtatcatc agtctttgat tcataaaccc
2301 ataagtttaa gtggcccttg ttcagaggtt taacattgca gtgtgtctgt
2351 aagtattgaa ttattgattt tatgtaatgg ctctcccttt caggatcacg
2401 aacacacttg cttcccaagg ttttgcaaag tccaacaaat cctgaggcaa
2451 tgctactttg aaatgcactt ttattcacag cttccgacag caacttttga
2501 gcacctctag taaatcctga agatagcttg ttttgtaatg tcctgatcag
2551 tgttggaact ttttcctctt ctaaatttaa agcagaagga taaataacct
2601 tctgacgcaa taccatccta agtggatggc aggctgtcaa atttaaccaa
2651 cagatcatta gatcttcagt agaagggggt tttacaccca tcaattcagc
2701 caaaccaact aatgtttctg acctattttg tgataagtaa gccgatgcaa
2751 actcctcatg aagctcattt gatttcaatt tgttgtaaag aattcttagt
2801 agggacctga cactcgcagt cccctctggt aatgtttgtt caatcaccct
2851 cattattctg tatcccctat tcccatcgac ccaatccttg acatctgaat
2901 cactgtgaag caaaaatggg tcaataggat atttactaaa ctcaagtaat
2951 ctcaaagttc gtttctgaac ttcgttgcaa actgacactg gtacaccatt
3001 ggcaactgct tgatcaataa tcgtgtccac agtttcagcc aattggtgtg
3051 gttccttgca tttgatatta tgtagtgatg ctgccacaaa tttgctcaac
3101 agtggaactt catcacccca gacataaaat cttgatttga attcagctac
3151 aaatctgcca acaacacttt ttgggcttat aaacttgttt aaaagactac
3201 ttaaatagtt gtggaattct agataaatga ggaattcttc tggatcagta
3251 tccatcagtt ctgtaaattt atgactaaac aaagaaattt ggtcatcact
3301 agatgtataa gcttcaatgg ggttacctga cactaatctc agtgcatagt
3351 taatgaacct ctcacttatc aaaccataaa aatcagatgt gttgtgcagg
3401 attccctgcc ccatatctag tacagaggaa aagtgagatg ggatgacccc
3451 tctttcaaat tcagagaaga acaaactttc agtgatcgtc tgagaagtgt
3501 ctttcatgat ccctaatttt ctcttgatat aagacctcat cattgctgtg
3551 acaacattga aaggcacctc taccagctta tgaatatgcc aagataaaat
3601 tgttgatatg ttgtcacagc cttttaattc tacttcagtt cctttgagtt
3651 tgggactcaa atttctgtat aacatcaaaa acaagaatgg gcacatcatg
3701 ggtccccatt tactatgatc caatgagtaa gaggcatgag ccaatgaaac
3751 acccaatttc atgccaagaa tagctttttc aaattccttc tcattgttaa
3801 ggcagctacc ctctaattgt tttgtataag attcaaagta atcttcaaca
3851 aatctagtaa acattttcgt tctcaaatca ccaatgtata gctctctatt
3901 tccaccaact tgctctttat atgatagaga gaatttcatc ctgccagtgt
3951 ccggacctgt ctctgtatat gaactaggag attcttgact ataaaaacaa
4001 aggtttttaa gtgcagatgt taaacagttg actagtgaca atgccttgct
4051 gagggcttct gagttacttt ctctttcact tattctcgaa tcatccatca
4101 atctgccatg atcaaaccgg aaatttagat tctgtgattt gtaatgtgaa
4151 tattttcctg acaatttatt tgcatccatc tgaagtaata atgacttgaa
4201 gcagtgaaaa tattcccctg acatgtatgt ccttgttgct aatgcttgtg
4251 tcatcttttc tattggacag aggcctgctt cagagtcata aaagtatttt
4301 gttctaaaat ctttattgtt aaaagctttc tcacacactt ccttgtaaaa
4351 attctcactt agaaggcctt tgtcaaagtc ctcaaccaga tggtatgata
4401 attctcctaa tattaatcgt ctacttaatt catcttcaac aatgatcttt
4451 aagtcattga cactcttatc attgttctgg gacctcacgc ctctgtttgg
4501 tttgtattga tctaacactc tttccacaga ggcttttagc tgatccatat
4551 aatcagagtc aacgtctaaa atttcctcag gttgctcaga tttagatgag
4601 cctataacca ggctggataa aacctcttga atcttatagt cataatcttc
4651 tttgttcagc aagtatttac cctttctaga aaagatttct gacaactgac
4701 aaacagcaac actaacaagt ttatcataat tgtaatccaa tactctgcca
4751 tctttagtgt atttattgat caccacactt ttattgctgg ccaaatccag
4801 cgcagtggca gatccactgt cttcaagagg gtctttcata cccttcttta
4851 attctgattc tttgaaaagt agccctgaat tgaatgcaga gagcatcagt
4901 gaaaaaactt ttttggatac gccaggcttc ttggatggtg gatcatccac
4951 ttcatcacag gtttttttac tcaagaacat gtttacacca tgcagaatat
5001 catctttttc ttcatcagtc ggggtttctt tgggattgac tgttaatgag
5051 ccaaattgaa ttttaggttc caaatatttt tcaaaacatt ttatctgatc
5101 tgttagtcta tcaggcgtct cttttgtgat aaaatgacag aaataagata
5151 tatttaaaat aaatttgaac ctattgttca acattgtgct tacttcatca
5201 ttcagcaaaa ttgttaagat tttccccaaa agcttaaaca agaagaactc
5251 agcatcagtg atcagttctt ccctcaactt gtcaaacaac tctacatggt
5301 ggtaatcaga aacaaatgcc atgatgaagt atctgagatt ttgaagtagt
5351 ttctgggatc tcttactggg ttgacaaaga atcactagta aaatcatctt
5401 tgtcagcttc tttatgtcac ggagactatc ctccaactcc acaataccca
5451 tcaaccaggt catcatagta tcaataacct ttgtaatcac attttcagaa
5501 aatattggac aaaaataccg tttaggatca gcataaaaag agcagatttc
5551 acccaccctc ttactattaa cagagtaaca ttttgaccct tcaccagttt
5601 tttgatagag taacacaaga tctctgtact cattccctaa ctcctgatag
5651 tagcactcct tacactgcac cactctgtac ctttctctcc ccattgcatt
5701 ctgtcttgtc ttgactgtgg aggaggtttt cattgagttt acaagggata
5751 gtgataaaga tgagagcatc tttaagtctg agtcatcttc agctgagaat
5801 tctcttagtg gaatgggtgg ctgttgattg gttttaatgt agctgattgt
5851 cggagtcact cccacaatct tgaatctcat gatttcttct aggccaactt
5901 tgtttaggaa atcaaatgag accccatagg attcaaagct gagaccaaca
5951 tcccctaaag ctttgcttga cttttgaatc atggtgttta tcatcttatg
6001 caactctgtc gacttttgtc caacacctcc attggccttc aacctacgct
6051 ttaaccactt agataagtca tgttgaatgg caccgacaga aaccagtcgg
6101 tctcccacac tgaaaaatga tgatcctaac cagtcccttt cacataaagt
6151 agggaataat tctctaacat aacaatggct cataagaatg atggtgtcta
6201 tcaataacaa cagcttcctt ctagtattga gaacttttag tgatttcacc
6251 ttgttaaagg ctgaccttaa cccagtgggt agattcgaaa tttcattcac
6301 ttcagcattt gattcactat ctatcctcag atgaatataa cgcagaatgg
6351 ggctgatgtt cggaagctca gcagccaatg catcaactgt ggtttcttct
6401 accccacaaa ttcctatacc cttgtacatt tcacaatatt cttttaacag
6451 acttttttga tccacttttc taaattggtg cttaatgact ccctttttta
6501 atttttgtct aaacacctga taaaggtttt caatttgacc tttcaattca
6551 accccaccaa tgctcgggtc aatgcctatg tggcatgcct tcagtatctc
6601 attgtagtgt tcccccctgc agtctagaag tgaatggagt ccttgtgccc
6651 ctgaggccct acctcccgac acattgagtg attcacaaag tctcagatat
6701 tctgattctt caaacaatgc attattctct tgctcaaact caagaagttt
6751 aaacaaattg tgtcgaaact gatcgcaaac ccattcttcc attagtgaat
6801 tatagtaact tgttctccca tcaatgattg gtatcagact gatcccagct
6851 ctctccaagt ctccttttaa tgaatccaat ttcacactgt cttcttgata
6901 cttctgctgg aaatttgtag gatttgacct gacaaaacat tcaagtataa
6951 ttagaatgtt accatttagc ttcatcccat ctggaaccac aagagggaga
7001 gatgggcaca gaatgtggtt ttggaataga aaattctcaa cactttgccc
7051 ttctgtattg tgtgtgcagc aatttgtatc acatgaatct atttcaatac
7101 acagagacaa cagttttaac ccctcaatga gaagggacct aggctcagac
7151 tggcccagga acgcaagctt ttgtctcgca attcgttcat cttgtcgaag
7201 gtatctagaa atgagtagct ttgtttctcg aagggattcc tccatcagaa
7251 ttcctgctca gatcacaaag cgcattagac aaatagcttg acacaatgcc
7301 taggatcctc ggtcgc