Sequence of DPV Tomato mild leaf curl virus
Tomato mild leaf curl virus - [Uberlandia] segment DNA-B, complete sequence.
ACC No: DQ336352
Dated: 2006-07-22 | Length: 2545 | CRC: 449534524
ID DQ336352; SV 1; circular; genomic DNA; STD; VRL; 2545 BP.
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AC DQ336352;
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DT 19-JAN-2006 (Rel. 86, Created)
DT 22-JUL-2006 (Rel. 88, Last updated, Version 2)
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DE Tomato mild leaf curl virus - [Uberlandia] segment DNA-B, complete
DE sequence.
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KW .
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OS Tomato mild leaf curl virus - [Uberlandia]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2545
RA Fernandes J.J., Carvalho M.G., Andrade E.C., Brommonschenkel S.H.,
RA Fontes E.P.B., Zerbini F.M.;
RT "Biological and molecular properties of Tomato rugose mosaic virus (ToRMV),
RT a new tomato-infecting begomovirus from Brazil";
RL Plant Pathol. 55(4):513-522(2006).
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RN [2]
RP 1-2545
RA Fernandes J.J., Carvalho M.G., Fontes E.P.B., Zerbini F.M.;
RT ;
RL Submitted (19-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n,
RL Vicosa, MG 36570-000, Brazil
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FH Key Location/Qualifiers
FH
FT source 1. .2545
FT /organism="Tomato mild leaf curl virus - [Uberlandia]"
FT /segment="DNA-B"
FT /isolate="[Brazil:Minas Gerais-Uberlandia3:1996]"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /virion
FT /db_xref="taxon:366920"
FT gene 403. .1173
FT /gene="NSP"
FT CDS 403. .1173
FT /codon_start=1
FT /gene="NSP"
FT /product="nuclear shuttle protein"
FT /db_xref="GOA:Q2LCT5"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR001530"
FT /db_xref="UniProtKB/TrEMBL:Q2LCT5"
FT /protein_id="ABC68295.1"
FT /translation="MSPTRYRRGWASTQRLGYSRQYLFKRPYYCKRSDGKYRSGNSNQV
FT NEDNKLSQQRIHENQFGPEFVMGHNTAVSTFITFPSLSKTEPGRSRAYIKLKRLRFKGT
FT VKIERVHADVTMDGIIPKIEGVFSVVVVVDRKPHLSSSGCLHTFDELFGARIHSHGNLA
FT ITPSLKDRFYIRHVWKKVISVEKDSMMVDLEGKTSLSNKRFNCWSAFKDLDRDSCNGVY
FT ANISKNALLVYYCWMSDAMSTASSFVSFDLDYVG"
FT gene complement(1311. .2192)
FT /gene="MP"
FT CDS complement(1311. .2192)
FT /codon_start=1
FT /gene="MP"
FT /product="movement protein"
FT /db_xref="InterPro:IPR000211"
FT /db_xref="UniProtKB/TrEMBL:Q2LCT4"
FT /protein_id="ABC68296.1"
FT /translation="MDSQVVCPPNAFNYIESRRDEYQLSHDLTEIILQFPSKATQLSAR
FT LNRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTENESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWKLYYKVSDSNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIMS
FT KQFTVNDIDFSHVGYGKWERKLIRSASTSRFGLHGPIELNPGESWATRSTIETAQIEAQ
FT SDLGEALHPYKDLNRLGTAILDPGDSASMIGAQRTQSNITLSMAQLNDLVRSTVQECIK
FT TNCIPPQPKSLK"
XX
SQ Sequence 2545 BP; 729 A; 400 C; 536 G; 880 T; 0 other;
dq336352 Length: 2545 22-JUL-2006 Type: N Check: 4271 ..
1 accggatggc cgcgcgattt ttttttggtg gacccatctt gaaattgatt
51 gagcgcattt ttgacgtccg cgaattgagt tgagcgcaat atttcagttc
101 cgtcaatata gttagtggac taactttaat ttgaaataaa gtatatcttt
151 ttgtgtaacc aatcagtatg cggctataga gtctaagtta tgtattacat
201 tgatgtgatt tcaaattcgt ataataatgt cgagtaccac tactttagct
251 gatattttca atatttatgt cattgtcaag atgtacggta ttcatgacgt
301 ggaccaatta attgttcgcc atggagtcta attaactaat atatgaaatg
351 atgattttta atataaattc catagatatt gtgatagata tgatatcgca
401 tcatgtctcc tactcggtat agacgtggtt gggcgtctac tcaacgacta
451 ggttattcac gtcaatattt gttcaaacgt ccttattatt gtaaacgttc
501 tgatgggaaa taccgatcgg gtaactctaa tcaggtcaat gaggataata
551 agttgtcgca acagcgtata catgagaacc agtttggtcc agaatttgta
601 atgggtcata atacagcagt atcgaccttt atcacttttc ctagtttatc
651 taaaactgaa ccgggcagat ccagggcata tattaagttg aaacgtttac
701 gtttcaaagg tactgtcaag attgagcgtg ttcatgctga tgtgactatg
751 gatggtataa taccaaagat tgaaggcgta ttttcagtgg ttgtcgttgt
801 tgatcgtaaa ccccatttga gttcatctgg atgtctgcat acatttgacg
851 agctctttgg tgcacggatc cacagtcatg gcaatttggc tatcactcca
901 tctttgaaag atcgttttta tatacgtcac gtttggaaga aagtaatatc
951 tgttgagaag gatagtatga tggttgatct tgaaggaaag acatcattgt
1001 ctaataaacg ttttaattgt tggtctgctt ttaaggatct tgatcgtgat
1051 tcatgtaatg gtgtttatgc gaatataagc aagaacgccc ttttagttta
1101 ttactgttgg atgtcggatg cgatgtctac ggcgtcctca tttgtatcgt
1151 tcgatcttga ttatgttggt taactattaa aatattaatg tatttatatt
1201 tacatgagaa aataatttat ttaagaaaac gtaatcacat aatataatta
1251 tatttactga aacttcggct gcgcagctgc atgcaaaaaa aaatattggc
1301 aacttgatat ttatttcaat gatttgggct gtggaggaat acagttagtt
1351 ttaatacatt cttgtactgt tgacctaaca agatcgttta attgggccat
1401 tgacagtgtg atgttggatt gcgtcctttg ggccccaatc attgaagccg
1451 aatcacctgg atctaatatg gcagtaccta acctatttag atctttgtat
1501 ggatgtaacg cctcccctag gtctgattgg gcttctattt gggccgtctc
1551 tattgtactc cttgtggccc atgactctcc tggatttagt tctattgggc
1601 catgaagccc aaatcttgaa gttgatgccg atcttatcaa ttttctctcc
1651 cactttccat aacctacatg agagaagtca atgtcattga cggtaaattg
1701 tttggacatt attttcactg tgggtgccct gaaaggtata tcaacggaat
1751 gttttgccgt tgatagcttc aattttcctt tgaattttgc gaagtgcgtc
1801 atctgatgaa cgttcgagtc agaaacctta taatatagct tccatggaat
1851 tgggtctttg agtgagaaga atgatgatga gaaatagtgg agatctatgt
1901 tgcatctgat tggaaaagtc catgacgctt gtaaggattc attttcagtc
1951 atccttttgt catgaatctc cacaattact gatcctgttg cgttgattgg
2001 tacctgttgt ctatattcta tgacgcaatg atcaatcttc atacagcttc
2051 gatttagtct tgcacttaat tgagttgctt ttgatggaaa ttgcaatatg
2101 atttcggtaa ggtcatgaga tagttgatat tcatcacgcc gagattctat
2151 ataattaaag gcgttgggtg ggcaaactac ttgagagtcc atatgtatta
2201 caagattgaa taagtggaga gaataagtta gaataagtta aggaaattgt
2251 agtagtgata gataagatga gtgaatggct gtgatattat aaagaattgt
2301 cgattcttat atagacgctt ttctgggtat ggataacttg gctaaataat
2351 aatgagtata attactaatt aagcttataa aatttacagt gaaacgcttt
2401 ggttgtggta tttatgtaaa taaggagatg agacccgata gctctccttc
2451 aaacttggcg aaatgaattg gggaatgggt ctcaatatat agtagagacc
2501 attatagaat ataattgcca cgtggcggcc atccgctata atatt