Sequence of DPV Tomato leaf curl New Delhi virus

Whitefly-transmitted Indian begomovirus from Solanum nigrum coat protein (AV1) gene, complete cds.

ACC No: DQ339123

Dated: 2006-01-25 | Length: 771 | CRC: 829104076

                
ID   DQ339123   standard; genomic DNA; VRL; 771 BP.
XX
AC   DQ339123;
XX
SV   DQ339123.1
XX
DT   25-JAN-2006 (Rel. 86, Created)
DT   25-JAN-2006 (Rel. 86, Last updated, Version 1)
XX
DE   Whitefly-transmitted Indian begomovirus from Solanum nigrum coat protein
DE   (AV1) gene, complete cds.
XX
KW   .
XX
OS   Whitefly-transmitted Indian begomovirus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
XX
RN   [1]
RP   1-771
RA   Sivalingam P.N., Malathi V.G., Varma A.;
RT   "Nucleotide sequence of coat protein gene of begomovirus infecting Solanum
RT   nigrum";
RL   Unpublished.
XX
RN   [2]
RP   1-771
RA   Sivalingam P.N., Malathi V.G., Varma A.;
RT   ;
RL   Submitted (21-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   Advanced Centre For Plant Virology, Indian Agricultural Research Institute,
RL   Pusa Road, New Delhi, Delhi 110 012, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /country="India"
FT                   /db_xref="taxon:366461"
FT                   /mol_type="genomic DNA"
FT                   /organism="Whitefly-transmitted Indian begomovirus"
FT                   /specific_host="Solanum nigrum"
FT   gene            1. .771
FT                   /gene="AV1"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="ABC70520.1"
FT                   /translation="MVKRPADIIISTPASKVRRRLNFDSPYGARAIVPIARVTKAKAWT
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFMVRDRRPTGSPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
XX
SQ   Sequence 771 BP; 233 A; 157 C; 185 G; 196 T; 0 other;

dq339123 Length: 771  25-JAN-2006  Type: N  Check: 9085  ..

       1  atggtgaagc gaccagcaga tatcatcatt tcaacgcccg catcgaaggt
      51  acgccgacgt ctcaacttcg acagccccta tggagctcgt gcaattgtcc
     101  ccattgcccg cgtcacaaaa gcaaaggcct ggacaaacag gccgatgaac
     151  agaaaaccca gaatgtacag aatgtataga agtcccgacg tgccaagggg
     201  ttgtgaaggc ccttgcaagg tgcaatcctt tgaatccaga cacgatgtct
     251  ctcatatcgg caaagtcatg tgtgttagtg atgttacccg aggaactgga
     301  ctcacacatc gcgtagggaa gcgattctgt gtgaaatccg tctatgtgct
     351  gggaaagata tggatggatg aaaacatcaa gacaaaaaac catactaaca
     401  gtgttatgtt ttttatggtc cgtgaccgtc gtcctacagg atccccccaa
     451  gattttgggg aagtttttaa tatgtttgac aatgaaccga gcacagcaac
     501  ggtgaagaac atgcatcgtg atcgttatca agtgttacgg aagtggcatg
     551  cgactgtgac gggaggaact tatgcatcta aggagcaagc attagttagg
     601  aagtttgtta gggttaataa ttatgttgtt tataatcaac aagaggccgg
     651  caagtatgag aatcatactg aaaatgcgtt aatgttgtat atggcctgta
     701  ctcacgcatc aaatcctgta tatgctactt tgaaaatcag gatctatttc
     751  tatgattcgg taacaaatta a