Sequence of DPV Mungbean yellow mosaic India virus
Mungbean yellow mosaic India virus pre-coat protein (AV2) and coat protein (AV1) genes, complete cds.
ACC No: DQ389155
Dated: 2008-01-10 | Length: 1122 | CRC: 345228343
ID DQ389155; SV 1; linear; genomic DNA; STD; VRL; 1122 BP.
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AC DQ389155;
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DT 03-MAY-2006 (Rel. 87, Created)
DT 10-JAN-2008 (Rel. 94, Last updated, Version 2)
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DE Mungbean yellow mosaic India virus pre-coat protein (AV2) and coat protein
DE (AV1) genes, complete cds.
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KW .
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OS Mungbean yellow mosaic India virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-1122
RX PUBMED; 17870189.
RA Rouhibakhsh A., Priya J., Periasamy M., Haq Q.M., Malathi V.G.;
RT "An improved DNA isolation method and PCR protocol for efficient detection
RT of multicomponents of begomovirus in legumes";
RL J. Virol. Methods 147(1):37-42(2008).
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RN [2]
RP 1-1122
RA Rouhibakhsh A., Malathi V.G.;
RT "Nucleotide sequence of right half of DNA A of Mungbean yellow mosaic India
RT virus isolate from soybean in Ludhiana, India";
RL Unpublished.
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RN [3]
RP 1-1122
RA Rouhibakhsh A., Malathi V.G.;
RT ;
RL Submitted (06-FEB-2006) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, IARI, Pusa Road, New Delhi, Delhi 110012, India
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FH Key Location/Qualifiers
FH
FT source 1. .1122
FT /organism="Mungbean yellow mosaic India virus"
FT /segment="DNA A"
FT /specific_host="soybean"
FT /mol_type="genomic DNA"
FT /country="India:Pnjab Agricultural University, Haryana"
FT /db_xref="taxon:223287"
FT gene 156. .497
FT /gene="AV2"
FT CDS 156. .497
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /db_xref="GOA:Q1KWX8"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="UniProtKB/TrEMBL:Q1KWX8"
FT /protein_id="ABD60122.1"
FT /translation="MWDPLLNDFPKSMHGFRCMLAIKYLQQVQENYPSNSLGFSYLTGL
FT IQVLRIRNHAKVDLRYCLLYPDIECTEEIELRYPAHAPCLCGRCPYQHEKEALDQPSHV
FT EETSVLPTV"
FT gene 316. .1089
FT /gene="AV1"
FT CDS 316. .1089
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /note="role in encapsidation of virus particles"
FT /db_xref="GOA:Q1KWX7"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:Q1KWX7"
FT /protein_id="ABD60121.1"
FT /translation="MPKWTYDTAFSTPISNARRRLNFDTPLMLPASAGGVPTNMKRRRW
FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITH
FT RIGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE
FT PSTATVKNDLRDRYQVLRKFNATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN"
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SQ Sequence 1122 BP; 314 A; 232 C; 244 G; 332 T; 0 other;
dq389155 Length: 1122 10-JAN-2008 Type: N Check: 5252 ..
1 acctgagtgc cccgcgaccg gtgtattggg tttactttag cttttctgct
51 ttttgggtac ccttatcttt agtcgttcaa tcagaagtgc tcctcagcgc
101 tatgttaatt caaatttgaa ttataaagca agtgcacact ctgaacccac
151 taacaatgtg ggatccatta ttgaacgact ttcccaaatc aatgcatgga
201 ttccggtgca tgttggcaat aaagtatttg cagcaagttc aagagaatta
251 tccttctaat tctcttggtt tctcatatct tacagggtta attcaggtat
301 tacgcatccg gaatcatgcc aaagtggacc tacgatactg ccttctctac
351 cccgatatcg aatgcacgga ggagattgaa cttcgatacc ccgctcatgc
401 tccctgcctc tgcgggaggt gtccctacca acatgaaaag gaggcgttgg
451 accaaccgtc ccatgtggag gaaacctcgg ttttaccgac tgtataggtc
501 ccctgatgtc cctcgtggtt gtgagggacc atgtaaggtt caatcatttg
551 agcaaaggca tgatattgcc cacacaggca aagtgatttg catatcggac
601 gtgactagag gtaatggaat tacacatcgt ataggcaaac gtttttgcat
651 caagtccgtt tacattactg ggaaggtttg gatggacgaa aacattaagt
701 ccaagaatca tacgaacact gtgatgttca agttatgtcg tgatagacga
751 ccatttggta cacccatgga ttttggtcaa gtgttcaaca tgtatgacaa
801 cgagccgagt acagctactg tgaagaacga tctgcgtgat cgttatcaag
851 tattgcgaaa gtttaatgcc accgttactg gtggccaata tgcttgtaag
901 gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta
951 caaccaccag gaggcagcga agtatgagaa ccatactgag aacgcattat
1001 tattgtatat ggcatgtact catgcctcaa atcctgtgta tgcaacactt
1051 aaaattcgga tctattttta cgattcgata ttgaattaat aaagtttgta
1101 ttgaacatta tgcgtaaagc tt