Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate lu308 coat protein (CP) mRNA, partial cds.

ACC No: DQ419573

Dated: 2006-03-28 | Length: 1094 | CRC: -494030855

                
ID   DQ419573   standard; mRNA; VRL; 1094 BP.
XX
AC   DQ419573;
XX
SV   DQ419573.1
XX
DT   28-MAR-2006 (Rel. 87, Created)
DT   28-MAR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Papaya ringspot virus P isolate lu308 coat protein (CP) mRNA, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1094
RA   Lu Y., Shen W., Zhou P., Niu Y., Tang Q.;
RT   "Genetic diversity among Papaya ringspot populations originating from
RT   different geographic locations";
RL   Unpublished.
XX
RN   [2]
RP   1-1094
RA   Lu Y., Shen W., Zhou P., Niu Y., Tang Q.;
RT   ;
RL   Submitted (28-FEB-2006) to the EMBL/GenBank/DDBJ databases.
RL   Haikou, Hainan, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1094
FT                   /organism="Papaya ringspot virus P"
FT                   /isolate="lu308"
FT                   /mol_type="mRNA"
FT                   /country="China:Hainan"
FT                   /db_xref="taxon:12206"
FT   gene            <1. .1094
FT                   /gene="CP"
FT   CDS             <1. .855
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ABD93581.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEGKDKQKDKNNDGTSDGNDVSTSTKT
FT                   GERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPKQIDISNTRAT
FT                   QSQFEKWYEGVRNDYGLSDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPI
FT                   KPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYE
FT                   VNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLG
FT                   MRN"
FT   3'UTR           856. .1094
FT                   /gene="CP"
XX
SQ   Sequence 1094 BP; 366 A; 191 C; 259 G; 278 T; 0 other;

dq419573 Length: 1094  28-MAR-2006  Type: N  Check: 216  ..

       1  aatgaagctg tggatgctgg tctgaatgag aagctcaaag aaaaagaaaa
      51  acaaaaagaa ggaaaagata aacaaaagga taaaaataat gatggtacta
     101  gtgacggaaa tgatgtgtca actagtacaa aaactggaga gagagatagg
     151  gatgtcaatg ccggaactag tgggactttc actgttccga ggataaaatc
     201  atttactgat aagatgattt taccaagaat taagggaaaa actgtcctta
     251  atttgaatca tcttcttcag tataatccga aacaaattga catctcaaac
     301  actcgcgcca ctcaatctca atttgagaag tggtacgagg gagtgaggaa
     351  tgattacggt ctgagtgata acgaaatgca ggtaatgtta aacggtttga
     401  tggtttggtg tatcgaaaat ggtacatctc cagacatatc tggtgtctgg
     451  gttatgatgg atggggaaac tcaagtcgat taccccatca aacctttaat
     501  tgagcacgca actccttcgt ttagacagat catggctcac tttagtaacg
     551  cggcagaagc atacattgcg aagaggaatg caactgagag gtacatgccg
     601  cggtatggaa tcaagagaaa tttgactgac attagcctcg ctagatatgc
     651  tttcgatttc tatgaggtga attcaaaaac tcctgatagg gctcgtgaag
     701  ctcatatgca gatgaaagct gcagcgctgc gcaacactaa tcgcagaatg
     751  tttggaatgg acggcagtgt cagtaacaag gaagaaaaca cggagagaca
     801  cacagtggaa gatgtcaaca gagacatgca ctctctcctg ggtatgcgta
     851  attgaatact cgcgctagtg tgtttgtcgg gcctggctcg accctgtttc
     901  accttataat actatttata agcattagaa tatagtgtgg ctgcgccacc
     951  gcttctattt tatagtgagg gttgccctcc gtgcttttag tattattcga
    1001  gttctttgag tttccataca gtgtgggtgg cccacgtgct attcgaacct
    1051  cttggaatga gagaaaaaaa aaaaaaaaca aaaaaaaaaa aaaa