Sequence of DPV Mimosa yellow leaf curl virus
Mimosa yellow leaf curl virus segment DNA-A, complete sequence.
ACC No: DQ641695
Dated: 2007-12-21 | Length: 2757 | CRC: 1176000286
ID DQ641695; SV 1; circular; genomic DNA; STD; VRL; 2757 BP.
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AC DQ641695;
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DT 03-MAY-2007 (Rel. 91, Created)
DT 21-DEC-2007 (Rel. 94, Last updated, Version 2)
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DE Mimosa yellow leaf curl virus segment DNA-A, complete sequence.
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KW .
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OS Mimosa yellow leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2757
RX PUBMED; 18089756.
RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.;
RT "Molecular characterization of begomoviruses and DNA satellites from
RT Vietnam: additional evidence that the New World geminiviruses were present
RT in the Old World prior to continental separation";
RL J. Gen. Virol. 89(PT 1):312-326(2008).
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RN [2]
RP 1-2757
RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.;
RT ;
RL Submitted (18-MAY-2006) to the EMBL/GenBank/DDBJ databases.
RL Institute of Health and Biomedical Innovation, Queensland University of
RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia
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FH Key Location/Qualifiers
FH
FT source 1. .2757
FT /organism="Mimosa yellow leaf curl virus"
FT /segment="DNA-A"
FT /specific_host="Touch me not (Mimosa sp., Fabaceae); weed"
FT /mol_type="genomic DNA"
FT /country="Viet Nam:Binhduong"
FT /note="acronym: MiYLCV"
FT /db_xref="taxon:390440"
FT gene 138. .488
FT /gene="AV2"
FT CDS 138. .488
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:A5H173"
FT /protein_id="ABG26030.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVEDTYSPDTLGYDLLRDL
FT ISVIRAKDYVEASRRYSHFHARLQSSSPIELRQPICQPCCCPHCPRHKQKEVMGESAHV
FT QKAQNVQDVQKP"
FT gene 298. .1071
FT /gene="AV1"
FT CDS 298. .1071
FT /codon_start=1
FT /gene="AV1"
FT /product="CP protein"
FT /db_xref="GOA:A5H174"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:A5H174"
FT /protein_id="ABG26029.1"
FT /translation="MSKRPADIVISTPASKVRRRSNFDSPYASRAAAPTVLVTNKRRSW
FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH
FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE
FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT gene complement(1068. .1472)
FT /gene="AC3"
FT CDS complement(1068. .1472)
FT /codon_start=1
FT /gene="AC3"
FT /product="REn protein"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:A5H169"
FT /protein_id="ABG26033.1"
FT /translation="MDSRTGELITAAQAENGVYIWTINNPLYFKVTQHHDRPFLRNHDI
FT ITVQVQFNHNLRKALGIHKCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINN
FT VIRACNHVLWDVLENTEYVTHSHIIKFNLY"
FT gene complement(1213. .1620)
FT /gene="AC2"
FT CDS complement(1213. .1620)
FT /codon_start=1
FT /gene="AC2"
FT /product="TrAP protein"
FT /db_xref="GOA:A5H170"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:A5H170"
FT /protein_id="ABG26032.1"
FT /translation="MRNSSPSRSHCTQVPIKVQHNIAKKRPIRRRRVDLPCGCSYYFGI
FT NCASHGFTHRGTHHCSSSREWRIYLDNQQSPLFQSDPAPRQAISEEPRHHNSPGPVQPQ
FT PEESVGDTQMFSNLPNLDSLTTSDLAFLKSI"
FT gene complement(1520. .2608)
FT /gene="AC1"
FT CDS complement(1520. .2608)
FT /codon_start=1
FT /gene="AC1"
FT /product="rep protein"
FT /db_xref="GOA:A5H171"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:A5H171"
FT /protein_id="ABG26031.1"
FT /translation="MAPPKRFRISAKNYFLTYPQCSLTKEEALSQLQNIQTPTNKKYIK
FT ICRELHEDGSPHLHVLLQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTIEWGDFQIDGRSARGGCQNANDACAEALNAATKEAALNIIREKLPKDYIFQFH
FT NLNANLDRIFAPPLEVFVCPFLSSSFDQVPEELEVWVSENVRDAAARPWRPQSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLGLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKDWALKNAEFITLTEPL
FT YSGTNQSPAQHSQEEANSEASS"
FT gene complement(2194. .2451)
FT /gene="AC4"
FT CDS complement(2194. .2451)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:A5H172"
FT /protein_id="ABG26034.1"
FT /translation="MGALISTCYSSSKGNSSARITDSSTWYPQPGQHISIRTFRELNPV
FT PTSSPISTRTGTQSNGEISRSTEEVLGEAARMLTTLAQRR"
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SQ Sequence 2757 BP; 738 A; 566 C; 617 G; 836 T; 0 other;
dq641695 Length: 2757 21-DEC-2007 Type: N Check: 4199 ..
1 accggatggc cgcgaaaaat taaaaaaagt ggtggccccc gccactaaga
51 aatgtccgcc actcagaact ctccctcaaa gcttatttag tacgttcccg
101 ctctatttaa acttggtccc caagtttaaa ttcaaacatg tgggatccac
151 tgttgaatga gtttcctgaa accgtacacg gttttaggtg tatgttagcg
201 attaaatatt tgcaattagt agaagataca tactctcctg atacattagg
251 gtacgatctg cttcgtgatt taatttcagt tattcgtgct aaggattatg
301 tcgaagcgtc ccgcagatat agtcatttcc acgcccgcct ccaaagttcg
351 tcgccgatcg aacttcgaca gcccatatgc cagccgtgct gctgccccca
401 ctgtcctcgt cacaaacaaa aggaggtcat gggtgaatcg gcccatgtac
451 agaaagccca gaatgtacag gatgtacaaa agccctgatg tccctcgtgg
501 ctgtgaaggc ccatgtaagg tccaatctta tgaacagcgt catgatgtgg
551 cccatgtagg taaggtaatt tgtgtgtcgg atgtcacccg tgggaatggg
601 ttgactcatc gtgttgggaa gaggttctgt gtcaagtcca tttatgtttt
651 gggaaaaata tggatggatg aaaacattaa gaccaagaat cacacgaata
701 ctgtgatgtt ttttttagtt cgtgatagga gaccatttgg tactccacag
751 gattttggtc aggtttttaa catgtatgat aacgagccta gcactgctac
801 tgtgaagaac gacaacaggg atcgctttca agttctacgg cgttttcagg
851 cgactgttac gggtggtcaa tatgcaagta aggagcaggc gatagttagg
901 aaatttatga aggtgaacaa tcatgtgacg tataatcatc aagaagctgc
951 gaagtatgac aatcatactg agaatgctct tttattgtat atggcatgta
1001 ctcatgccag taacccagtg tatgctactt tgaagatcag gatctatttc
1051 tatgattctg ttcagaatta ataaagattg aattttatta tatgagaatg
1101 tgttacatac tctgtgtttt ccaatacatc ccataataca tgattacatg
1151 ctctaattac attgttaata ctaattacac ccaaattatc taaatatttc
1201 atacattgaa ctctaaatac tcttaagaaa cgccaagtct gaggttgtaa
1251 gcgagtccag atttggaaga ttagaaaaca tttgtgtatc cccaacgctt
1301 tcctcaggtt gtggttgaac tggacctgga ctgttatgat gtcgtggttc
1351 ctcagaaatg gcctgtcgtg gtgctgggtc actttgaaat agaggggatt
1401 gttgattgtc cagatatata cgccattctc ggcttgagct gcagtgatga
1451 gttcccctgt gcgtgaatcc atgcgatgcg cagttaattc caaaatagta
1501 tgagcatcca cagggaagat caactcgacg cctccgaatt ggcctcttct
1551 tggctatgtt gtgctggact ttgattggta cctgagtaca atggctccgt
1601 gagggtgatg aattccgcat tcttcaatgc ccagtccttt aaagctgaat
1651 tcttttcttc gtccaagtac tctttatatg atgatgttgg gcctggattg
1701 cagaggaaga tagttgggat tccaccttta atttgaattg gtttcccgta
1751 cttagtgttg ctttgccagt ccctttgggc ccccatgaat tctttaaagt
1801 gctttaggta gtgggggtct acgtcatcta tgacgttgta ccatgcatca
1851 ttgctgtaca cctttgggct taaaccaagg tgcccacata aataattatg
1901 tggacccaat gacctggccc acattgtctt gccggtacga ctatcaccct
1951 ctattacaat actttgaggt ctccacggcc gcgcagcggc atccctcaca
2001 ttctcagaga cccagacttc aagttcttct ggaacttgat cgaaagaaga
2051 agaaagaaaa ggacaaacga aaacctccaa aggaggtgca aaaatcctat
2101 ctaaattggc gtttaaatta tgaaattgaa aaatataatc ttttgggagt
2151 ttctccctta ttatgtttaa tgctgcttcc ttagtagctg catttaacgc
2201 ctctgcgcaa gcgtcgttag cattctggca gcctccccta gcacttcttc
2251 cgtcgatctg gaaatctccc cattcgattg tgtccccgtc cttgtcgata
2301 taggacttga cgtcggaact ggatttagct ccctgaatgt tcggatggaa
2351 atgtgctgac ctggttgggg ataccaggtc gaagaatctg ttattcgtgc
2401 agacgaattt cccttcgaac tggagtaaca cgtggagatg agggctccca
2451 tcttcgtgaa gctctctgca gattttgata tattttttgt tggttggggt
2501 ttgtatattt tgtaattggg aaagtgcctc ttctttagtt agagagcact
2551 gtggataagt gaggaagtag tttttagcag aaattctaaa acgtttgggc
2601 ggagccattt gacttggtca attggtgaca atccaacttg ccaaatgaat
2651 tggtgactgg tgacaattta tacttgtcac caaatggcat tctcgtaatt
2701 gtcaaagaaa ttcaaaattc aaatttgaaa tccaaaagcg gccatccgta
2751 taatatt