Sequence of DPV Tobacco streak virus

Tobacco streak virus isolate Osmanabad-2004 coat protein gene, complete cds.

ACC No: DQ864457

Dated: 2010-09-22 | Length: 717 | CRC: -817959805

                
ID   DQ864457; SV 1; linear; genomic RNA; STD; VRL; 717 BP.
XX
AC   DQ864457;
XX
DT   25-SEP-2006 (Rel. 89, Created)
DT   22-SEP-2010 (Rel. 106, Last updated, Version 3)
XX
DE   Tobacco streak virus isolate Osmanabad-2004 coat protein gene, complete
DE   cds.
XX
KW   .
XX
OS   Tobacco streak virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Ilarvirus.
XX
RN   [1]
RP   1-717
RA   Arun Kumar N., Lakshmi Narasu M., Usha B.Z., Ravi K.S.;
RT   "Sequence diversity in the coat protein gene of Tobacco streak virus from
RT   southern India";
RL   Unpublished.
XX
RN   [2]
RP   1-717
RA   Ravi K.S., Arun Kumar N.;
RT   ;
RL   Submitted (22-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Research Center, Jalna-Aurangabad Road,
RL   Dawalwadi, Jalna, MH 431 203, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .717
FT                   /organism="Tobacco streak virus"
FT                   /host="Glycine max L. (soybean)"
FT                   /isolate="Osmanabad-2004; isolate 5"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="TSV-infected leaf material"
FT                   /collection_date="Jun-2004"
FT                   /db_xref="taxon:12317"
FT   CDS             1. .717
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q06IQ7"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:Q06IQ7"
FT                   /protein_id="ABI81749.1"
FT                   /translation="MNTLIQSPDHPSNAMSSRTNNRFNSNSRCPTCFDELDAVARGCPA
FT                   HAPANTVSRRQRRNAARAAAFRNANARMTAPIPMVPVSRPQAKTSLKLPNNQVWVTRKA
FT                   SEWSAKTIDTNDAIPLKTIVEGIPEINSETKFYRLLIGFVAVSDGTFGMADGATGDVIP
FT                   DPPVVGRLGFKKNTYRSRDFDLGGKLLNQLDDRAIVWCLDERRRDAKRVQLAGYWIAIS
FT                   KPAPLMPPEDFLVNQD"
XX
SQ   Sequence 717 BP; 179 A; 192 C; 184 G; 162 T; 0 other;

dq864457 Length: 717  22-SEP-2010  Type: N  Check: 7996  ..

       1  atgaatactt tgatccaaag tccagaccat ccatccaacg ccatgtcttc
      51  ccgtactaac aaccgcttta acagcaacag cagatgccca acttgtttcg
     101  acgagttgga tgcagtagcg aggggttgcc ccgctcacgc tcccgcgaac
     151  actgtttcgc gacgtcagcg gcgaaatgcc gctagagctg ccgcgtttag
     201  gaacgcgaat gctcgaatga ccgcaccaat tcctatggtg ccggtttccc
     251  gccctcaagc gaagacatcg ttgaagctac ccaacaatca agtttgggta
     301  actcgcaaag cgagtgaatg gtctgcaaag accattgata ccaacgatgc
     351  tatccccctc aagaccatag tcgaggggat tcccgaaatc aattcggaga
     401  cgaagtttta ccgtctccta attggttttg tcgccgtctc tgatgggacg
     451  tttgggatgg ctgatggagc gacgggagat gtcattccgg acccaccggt
     501  cgttggacgg ttgggtttca agaagaatac ctaccgcagc cgagattttg
     551  atctcggcgg taagcttctc aaccaactag acgatagagc tatcgtctgg
     601  tgcctcgacg aaaggcgtcg agatgccaag agggttcagc tggcgggata
     651  ttggattgcc atatccaaac cagctccctt gatgccacca gaagatttcc
     701  tggtgaatca agactga