Sequence of DPV Cotton leaf curl Multan virus
Cotton leaf curl Rajasthan virus isolate Sri precoat protein (AV2), coat protein (AV1), replication enhancer protein (AC3), and transcription activator protein (AC2) genes, complete cds.
ACC No: EF057791
Dated: 2006-10-29 | Length: 1793 | CRC: 1405111133
ID EF057791; SV 1; linear; genomic DNA; STD; VRL; 1793 BP.
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AC EF057791;
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DT 29-OCT-2006 (Rel. 89, Created)
DT 29-OCT-2006 (Rel. 89, Last updated, Version 1)
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DE Cotton leaf curl Rajasthan virus isolate Sri precoat protein (AV2), coat
DE protein (AV1), replication enhancer protein (AC3), and transcription
DE activator protein (AC2) genes, complete cds.
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KW .
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OS Cotton leaf curl Rajasthan virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-1793
RA Padmalatha K.V., Malathi V.G.;
RT "Cotton leaf curl disease is transmitted by whiteflies";
RL Unpublished.
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RN [2]
RP 1-1793
RA Padmalatha K.V., Malathi V.G.;
RT ;
RL Submitted (11-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute,
RL Pusa Road, New Delhi, Delhi 110012, India
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FH Key Location/Qualifiers
FH
FT source 1. .1793
FT /organism="Cotton leaf curl Rajasthan virus"
FT /isolate="Sri"
FT /mol_type="genomic DNA"
FT /country="India:Rajasthan, Sri Ganganagar, Sri Ganganagar
FT Research Station"
FT /note="CLCuRV-Sri"
FT /db_xref="taxon:223259"
FT gene 132. .488
FT /gene="AV2"
FT CDS 132. .488
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /protein_id="ABJ99987.1"
FT /translation="MWDPLLNEFPDTVHEFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT ICILRSRSYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT EAQDVQDVQKSRCS"
FT gene 292. .1062
FT /gene="AV1"
FT CDS 292. .1062
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="ABJ99988.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(1065. .1469)
FT /gene="AC3"
FT CDS complement(1065. .1469)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="ABJ99990.1"
FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI
FT LTIRIQFNYNTRRALGLHKCFLTFRIWTTLQPQTGLFLRVFKNQVLKYLNNLGVISINL
FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY"
FT gene complement(1162. .1614)
FT /gene="AC2"
FT CDS complement(1162. .1614)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="ABJ99989.1"
FT /translation="MRSSSHLIDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN
FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDHQPRQPSIHDEYGHTHDQDPVQLQH
FT AESSGTAQVFSNLSNLDDLTASDWSFLKGIQKPSPQISEQSRCNFN"
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SQ Sequence 1793 BP; 501 A; 348 C; 402 G; 542 T; 0 other;
ef057791 Length: 1793 29-OCT-2006 Type: N Check: 8590 ..
1 accggatggc cgcgcgattt ttttggtggg ccttaccatt aacacttgtc
51 ggccaatcat atgactccct caaagctaaa taacgctccc gcacactata
101 agtacttgcg cactaagttt caaattcaaa catgtgggat ccactattaa
151 acgaattccc tgatacggtt cacgagtttc ggtgtatgct ttctgtgaaa
201 tatttgcaac ttttgtcgca ggattattca ccggatacgc ttgggtacga
251 gttaatacgg gatttaattt gtattttacg ctcccgtagt tatgtcgaag
301 cgagctgccg atatcgtcat ttctacgccc gcgtcgaaag tacgccggcg
351 tctgaacttc ggcagcccat acaccagccg tgctgctgcc cccattgtcc
401 gcgtcacaaa acaacaggca tggacaaaca ggcctatgaa caggaagccc
451 aggatgtaca ggatgtacag aagtccagat gttcctagag gatgtgaagg
501 tccatgtaag gttcagtcgt ttgagtccag acatgatatt cagcatatag
551 gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat
601 agagttggta agagattttg tgtcaagtct gtttatgtgt tgggtaagat
651 atggatggat gagaacatta agacgaagaa tcacacgaat agtgtgatgt
701 ttttcttggt tagagatcgt agacctgttg ataaacctca agattttgga
751 gaggtattta atatgtttga taatgagccc agtacggcga ctgtgaagaa
801 tgttcatcgt gataggtatc aagttctgcg caaatggtat gcaactgtca
851 ccggtggaca atacgcttca aaggaacagg ctttggtcaa gaagtttgtc
901 agagttaaca attatgttgt ttacaatcaa caggaagcag gaaaatacga
951 gaatcatacg gaaaatgcgt taatgcttta tatggcttgt actcacgcta
1001 gcaaccctgt ttatgctacg ttgaagatta ggatatattt ttatgactct
1051 gtaacgaatt gatattaata aagtttaaat tttatttctg aatattgatc
1101 tacatacata gtttgttgga ttacattgta caatacatgt tctacagctt
1151 taataactaa attaattgaa attacaccga gattgttcag atatttgagg
1201 acttggtttt tgaataccct taagaaaaga ccagtctgag gctgtaaggt
1251 cgtccagatt cgaaaggtta gaaaacactt gtgcagtccc agagctctcc
1301 gcgtgttgta gttgaactgg atcctgatcg tgagtatgtc catattcgtc
1351 gtgaatggac ggttgacgtg gctgatgatc ttgaaataaa ggggatttgg
1401 aacctcccag atatatgcgc cattccctgc ttgagctgca gtgatgggtt
1451 cccctgtgcg tgaatccatg gttgtggcag ttgattgaca gataataaga
1501 acacccgcat tcaagatcta ctctcctcct cctgttgcgc ctcttcgctt
1551 ccctgtgctg tactttgatt ggtacctgag tacatgggtc tatcaagtgt
1601 gatgaagatc gcattcttta aagcccaatt ttttagtgca gaattcttct
1651 cttcatccaa ttgaccgctc ttgcaactct ccccggtata tcggtgatca
1701 atatatagtg atcaccaaat ggcataatgg taataaaaaa actttaattt
1751 gaaattcaaa ccaaaaggct aaagcggcca tccgtataat att