Sequence of DPV Turnip yellows virus
Turnip yellows virus clone pXHY0929-2 from China RdRp (RdRp) and coat protein genes, partial cds.
ACC No: EF090905
Dated: 2007-05-09 | Length: 1385 | CRC: -880880548
ID EF090905; SV 1; linear; genomic RNA; STD; VRL; 1385 BP.
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AC EF090905;
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DT 09-MAY-2007 (Rel. 91, Created)
DT 09-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE Turnip yellows virus clone pXHY0929-2 from China RdRp (RdRp) and coat
DE protein genes, partial cds.
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KW .
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OS Turnip yellows virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC Polerovirus.
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RN [1]
RP 1-1385
RA Xiang H., Shang Q., Han C., Li D., Yu J.;
RT "First report of Turnip yellows virus in China";
RL Unpublished.
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RN [2]
RP 1-1385
RA Han C.;
RT ;
RL Submitted (27-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, China Agricultural University, No.2 Yuanmingyuan West
RL Road, Haidian District, Beijing 100094, China
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FH Key Location/Qualifiers
FH
FT source 1. .1385
FT /organism="Turnip yellows virus"
FT /specific_host="flowering Chinese cabbage"
FT /mol_type="genomic RNA"
FT /country="China:Beijing"
FT /clone="pXHY0929-2"
FT /db_xref="taxon:131083"
FT gene <1. .585
FT /gene="RdRp"
FT CDS <1. .585
FT /codon_start=1
FT /gene="RdRp"
FT /product="RdRp"
FT /note="TuYV-RdRp"
FT /protein_id="ABQ14809.1"
FT /translation="SVADWMLQDDMIVRNRLTIDLNPATERLRSCWLRCISNSVLCLSD
FT GTLLAQTHPGVQKSGSYNTSSSNSRIRVMAAYHTGAAWAMAMGDDALESNPADLAAYKR
FT LGFKVEVSGQLEFCSHIFRAPDLALPVNENKMIYKLIYGYNPGSGNAEVVANYLAACFS
FT VLNELRHDPASVELLYSWLVDPVLPQKISRE"
FT CDS 790. .>1385
FT /codon_start=1
FT /product="coat protein"
FT /protein_id="ABQ14810.1"
FT /translation="MNTVVGRRTINGRRRPRRQTRRIQRNQPVVVVQASRTTQRRPRRR
FT RRGNNRTGRTVPTRGAGSSETFVFSKDNLAGSSSGAITFGPSLSDCPAFSNGILKAYHE
FT YKISMVILEFVSEASSQNSGSIAYELDPHCKLNSLSSTINKFGITKPGRKTFTASFING
FT IEWHDVAEDQFRILYKGNGSSSIAGSFRITIKCQF"
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SQ Sequence 1385 BP; 404 A; 356 C; 310 G; 315 T; 0 other;
ef090905 Length: 1385 09-MAY-2007 Type: N Check: 7713 ..
1 agtgttgcgg actggatgct ccaagacgac atgatcgtcc gcaatagact
51 taccatcgac ctcaaccctg caacagaaag attaagatcc tgttggttga
101 gatgcatctc aaactcagtg ctatgcctga gtgatggtac ccttttagcc
151 caaacccatc cgggcgttca gaaaagtggg agctacaaca catcaagctc
201 caactcccgg atcagagtta tggccgccta ccacacaggc gctgcctggg
251 ctatggcgat gggcgatgac gccctcgagt ccaatcccgc tgacctagca
301 gcgtacaaaa gactaggatt caaggtagag gtttccggac aactggaatt
351 ctgctctcac atctttagag cgccggacct cgccctccct gtgaacgaaa
401 acaagatgat ctataaattg atctatggct acaacccagg gagcggaaac
451 gctgaggtag ttgcgaacta cttggccgcc tgtttctcag ttctgaacga
501 gttgcggcat gatccagcgt ccgttgaact tctttactcg tggttagttg
551 acccagtgct accacaaaag atatccaggg agtaaagaag cataccagtc
601 agcttacatt gaaattctaa agagttttct gcaacagtaa gagacttaag
651 ttaaaaccac tcaaagatac aacggattac aaattcctag caggtttcac
701 cgcaggcttc gtttcatcga taccaatatc cgtgatcagt atctatttca
751 tctacctaag aatctctaaa cacgtacgcg aaatcgttaa tgaatacggt
801 cgtgggtaga agaacaatca atggaagaag acgaccacgc aggcaaacaa
851 gacgcattca gcgaaatcag ccagtggttg tggtccaagc ctctcggaca
901 acacaacgcc gacctagacg acgacgaaga ggtaacaacc ggacaggaag
951 aactgttcct accagaggag caggttcaag cgagacattt gttttctcaa
1001 aagacaatct cgcgggaagt tccagcggag caatcacgtt cgggccgagt
1051 ctatcagact gcccggcatt ctctaatgga atactcaagg cctaccatga
1101 gtataaaatc tcaatggtca ttttggagtt cgtctccgaa gcctcttccc
1151 aaaattccgg ttccatcgct tacgagctgg acccacactg taaactcaat
1201 tcactctcct caacgattaa caaattcggg atcacaaagc ccgggaggaa
1251 aacgtttaca gcgtctttca tcaacgggat cgaatggcat gacgttgccg
1301 aggaccaatt caggatcctc tacaaaggca atggttcttc atcgatagct
1351 ggttctttca gaatcaccat aaagtgccaa ttcca