Sequence of DPV Rice stripe virus

Rice stripe virus isolate LS-SDJN052 coat protein (cp) gene, complete cds.

ACC No: EF198680

Dated: 2008-01-10 | Length: 969 | CRC: 769078136

                
ID   EF198680; SV 1; linear; genomic RNA; STD; VRL; 969 BP.
XX
AC   EF198680;
XX
DT   10-JAN-2008 (Rel. 94, Created)
DT   10-JAN-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Rice stripe virus isolate LS-SDJN052 coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Ren C., Cheng Z., Zhou Y.;
RT   ;
RL   Submitted (26-DEC-2006) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 50
RL   Zhongling Road, Nanjing, Jiangsu 210014, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /isolate="LS-SDJN052"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12331"
FT   gene            complement(1. .969)
FT                   /gene="cp"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="ABQ02666.1"
FT                   /translation="MGSNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGPDD"
XX
SQ   Sequence 969 BP; 230 A; 251 C; 197 G; 291 T; 0 other;

ef198680 Length: 969  10-JAN-2008  Type: N  Check: 7162  ..

       1  ctagtcatct ggaccttctg cctcgtcctc gaagaactcc ttcaccaacc
      51  cgctgacttc agatgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agtttgctct gctgagccaa gtacagcctt gtctgattcc cataagtgct
     151  gatcgtattg acagacatac cagccagcgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc
     251  ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctcctttt
     351  tcttaccctc tggcatggtc tttttggtta tttggaagga gtgaatgatg
     401  tgcacaacaa acaaaatgtg acttagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tatcacatcc tgttagtccc aggtcagagg agtccacagc catcttaaca
     551  ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc
     601  cagccttcca agtgtgatag cattggcatt tgtccccacc gaggacacta
     651  tcccatacct cgacaccaag gtcgaagcct ctgtgcttcc agccgccact
     701  ttcactttct tagtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ctggcttgtt ggaacccat