Sequence of DPV Rice stripe virus

Rice stripe virus isolate LS-JSYD051 NS3 protein (NS3) gene, complete cds.

ACC No: EF198726

Dated: 2008-01-10 | Length: 636 | CRC: 1195375462

                
ID   EF198726; SV 1; linear; genomic RNA; STD; VRL; 636 BP.
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AC   EF198726;
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DT   10-JAN-2008 (Rel. 94, Created)
DT   10-JAN-2008 (Rel. 94, Last updated, Version 1)
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DE   Rice stripe virus isolate LS-JSYD051 NS3 protein (NS3) gene, complete cds.
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-636
RA   Ren C., Cheng Z., Zhou Y.;
RT   ;
RL   Submitted (26-DEC-2006) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 50
RL   Zhongling Road, Nanjing, Jiangsu 210014, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .636
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /isolate="LS-JSYD051"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12331"
FT   gene            1. .636
FT                   /gene="NS3"
FT   CDS             1. .636
FT                   /codon_start=1
FT                   /gene="NS3"
FT                   /product="NS3 protein"
FT                   /protein_id="ABQ02640.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRLPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 636 BP; 171 A; 144 C; 124 G; 197 T; 0 other;

ef198726 Length: 636  10-JAN-2008  Type: N  Check: 2055  ..

       1  atgaacgtgt tcacatcgtc tgtgggttct gtggaatttg atcatcctct
      51  gcttttggag aatgatctga ccagtttgag cataaactgt gatgatgtcc
     101  attgttcttc aagagcctta tgttatatat atgatattca ttcatctagg
     151  cacccttcca ttgatgagca tcagtttctg aggcttcttc atggccctga
     201  tgatgctgtc actctaggct ccttcttgaa aactctgatc tggattctgt
     251  cccatgataa gaatctccca gaagagtaca gacttcctac tataatgatg
     301  tcatcctcat atgtgaagtt cttcactgaa gtgaagccaa gacccccatc
     351  aacaaattgc tggacatgca gaatgtccaa agacaatttg ccctttaccg
     401  ttcctagtgt caagggattt cctccagatg cagagctcta cattgtgcca
     451  atatctgacc atgatggaaa gcctgtcaaa tttgacaata ggaagactct
     501  atatagatta cctagtaaga aaaggcataa gtatgtcatt tcttccgata
     551  aaccacctct tagtgcacgt tatgttaagt acgttgattc tagtgcacta
     601  gaaccctcac caggcagctc tccagctgtg ctgtag