Sequence of DPV Watermelon chlorotic stunt virus
Watermelon chlorotic stunt virus isolate IL segment DNA A, complete sequence.
ACC No: EF201809
Dated: 2007-01-30 | Length: 2753 | CRC: 933607008
ID EF201809; SV 1; circular; genomic DNA; STD; VRL; 2753 BP.
XX
AC EF201809;
XX
DT 30-JAN-2007 (Rel. 90, Created)
DT 30-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE Watermelon chlorotic stunt virus isolate IL segment DNA A, complete
DE sequence.
XX
KW .
XX
OS Watermelon chlorotic stunt virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2753
RA Abudy A., Lapidot M.;
RT "First report of watermelon chlorotic stunt virus (WmCSV) in Israel";
RL Unpublished.
XX
RN [2]
RP 1-2753
RA Abudy A., Lapidot M.;
RT ;
RL Submitted (28-DEC-2006) to the EMBL/GenBank/DDBJ databases.
RL Vegetable Research, Volcani Center, ARO, P.O. Box 6, Beit Dagan 50250,
RL Israel
XX
FH Key Location/Qualifiers
FH
FT source 1. .2753
FT /organism="Watermelon chlorotic stunt virus"
FT /segment="DNA A"
FT /isolate="IL"
FT /mol_type="genomic DNA"
FT /country="Israel"
FT /db_xref="taxon:35341"
FT gene 156. .515
FT /gene="AV2"
FT CDS 156. .515
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="ABM91594.1"
FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVESTYEPNTLGHELIRDL
FT ILVLRARDYGEANRRYSHFHSRFEGSSKTELRQPLHEPCSCPHCPRHKQASTMGQQAHV
FT SKAQDVQDVSKPRCP"
FT gene complement(220. .987)
FT /gene="AC5"
FT CDS complement(220. .987)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /protein_id="ABM91593.1"
FT /translation="MILILRSLLVVVYHMIVHTIEAFYQRLLLHPRGASDHGGMKLSHN
FT LETIAKIVLNCRSAGLVVEHIKNLSEVHWTGPIWTTITNKKEHDLIRMILFFYVLIHPD
FT LAKNVYRLHTKPFSDTMSDSTPPSNITDPPDDTGVFNVVSLFVRLNFARAFAALRDIWA
FT SIHPVHPGLSIHGPVGPLSTLACDEDSGGKSTAHVGAVEVQFSTNLRNGSGNENISCSL
FT RHNHGPGGQESDRGSIRGPKYWARRSIQRPAST"
FT gene 316. .1095
FT /gene="AV1"
FT CDS 316. .1092
FT /codon_start=1
FT /gene="AV1"
FT /product="capsid protein"
FT /protein_id="ABM91588.1"
FT /translation="MAKRTGDILISTPVSKVRRKLNFDSPYMSRALAPTVLVTSKRRQW
FT ANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRGVSDVTRGSGITH
FT RVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN
FT EPSTATVKNDLRDRFQVMRKFHATVVGGPSGMKEQALVKRFYRVYNHVVYNHQETAKYE
FT NHTENAMLLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(1089. .1493)
FT /gene="AC3"
FT CDS complement(1089. .1493)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="ABM91591.1"
FT /translation="MDSRTGEYITADQAWNGVFTWKINNPLYFTIIDHHQRPFLCRHDI
FT IHMQIRFYHNLRRALGIHKAFLNFRIWTTLRPQTGRFLRVFRTQVLKYLDMLGVISLNL
FT VVRAVSHVLENVLVGTIDVQENHVIKFDLY"
FT gene complement(1234. .1641)
FT /gene="AC2"
FT CDS complement(1234. .1641)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="ABM91590.1"
FT /translation="MPNSSSSQNLSSQPSIKIRHRLAKKKTIRRRRIDLKCGCSYYLHI
FT SCQNHGFSHRGIHYCGSSMEWRVYLEDKQPPIFHDNRSPPTPLSLPSRHNTHANTILPQ
FT PSEGVGDSQSFPELPNLDDFTASDWSFLKGI"
FT gene complement(1541. .2626)
FT /gene="AC1"
FT CDS complement(1541. .2626)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /protein_id="ABM91589.1"
FT /translation="MRPPRFRIQAKNIFLTYPRCSLSKEELLSFLVGLSLPSNLKYVKV
FT CRELHQNGEPHLHVLLQFAGKITITDNRLFDHVHPSRSACFHPNIQSAKSSTDVKSYLD
FT KDGDTVEWGKFQIDGRSARGGQQTANDAYATALNMSNKGEAMSVIKELAPKDFVLHYHN
FT IKSNLDRIFEEPVAPFVCPFPMSSFTLLPPELVDWASTNVCSSAARPWRPKSIVVEGES
FT RTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ
FT SNTKYGKPIQIKGGIPTIFLCNPGPSSSYKEFLEEEKNYALKEWADKNAEFVFLTEPLF
FT STEHQDQTQTRQKEDDSTTTH"
FT gene complement(2329. .2472)
FT /gene="AC4"
FT CDS complement(2329. .2472)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="ABM91592.1"
FT /translation="MGNLISMCSCSSPERSPSQTIASSIMYTQAVAPVSTPTYKALSPV
FT QT"
XX
SQ Sequence 2753 BP; 706 A; 625 C; 684 G; 738 T; 0 other;
ef201809 Length: 2753 30-JAN-2007 Type: N Check: 1034 ..
1 accggatgcc cgcggagccc aaaagatgac cccacaggac acgtgcacca
51 ataaaattgc gtgctttgag gtaagttagc tggaaatggg gttttgaaag
101 cgacaagtca tacgagtcgt atttatactg ctgctgcgga tcaacttttg
151 tcagtatgtg ggatccattg cttaatgact ttcccgagtc ggttcacggc
201 tttcggtgta tgctagctgt caagtacttg caggccgttg aatcgaccta
251 cgagcccaat actttgggcc acgaattgat ccgcgatctg attcttgtcc
301 tccgggcccg tgattatggc gaagcgaaca ggagatattc tcatttccac
351 tcccgtttcg aaggttcgtc gaaaactgaa cttcgacagc ccctacatga
401 gccgtgctct tgcccccact gtcctcgtca caagcaagcg tcgacaatgg
451 gccaacaggc ccatgtatcg aaagcccagg atgtacagga tgtatcgaag
501 cccagatgtc cctaagggct gcgaaggccc gtgcaaagtt cagtcgtacg
551 aacaacgaga cgacgttaaa cacaccggta tcgtccgggg ggtcagtgat
601 gttactaggg ggagtggaat cactcatcgt gtcggaaaaa ggttttgtgt
651 gaagtctata tacattcttg gcaagatctg gatggatgag aacataaaaa
701 aacaaaatca tacgaatcag gtcatgttct ttcttgttcg tgatcgtcgt
751 ccatatgggt ccagtccaat ggacttcgga caggttttta atatgttcga
801 caacgagccc agcactgcga cagttaagaa cgatcttcgc gatcgtttcc
851 aagttatgcg aaagtttcat gccaccgtgg tcggaggccc ctctgggatg
901 aaggagcagg cgctggtaaa acgcttctat cgtgtgtaca atcatgtggt
951 atacaaccac caagagactg cgaagtatga gaatcatact gagaatgcga
1001 tgttattgta tatggcgtgt acacacgcat cgaatcctgt gtatgcaaca
1051 ttgaaaattc gtatatactt ttatgactca gttacgaatt aataaagatc
1101 gaattttatt acgtgatttt cttgtacatc gattgtccca acaaggacat
1151 tttccaatac atgacttacg gccctaacaa ccaaatttag actaattaca
1201 cctaacatat cgaggtattt tagaacctgc gttctaaata cccttaagaa
1251 acgaccagtc tgaggccgta aagtcgtcca gattcggaag ttcaggaaag
1301 ctttgtgaat ccccaacgcc ctccgaaggt tgtggtagaa tcgtatttgc
1351 atgtgtatta tgtcgtgacg gcaaagaaag gggcgttggt ggtgatctat
1401 tatcgtgaaa tatagggggt tgtttatctt ccaggtaaac acgccattcc
1451 atgcttgatc cgcagtaatg tattccccgg tgcgagaatc catgattctg
1501 gcacgagata tgcaggtaat atgagcaacc gcactttaga tcaatgcgtc
1551 gtcgtcgaat cgtcttcttt ttggcgagtc tgtgtctgat cttgatgctc
1601 ggttgagaag agaggttctg tgaggaagac gaattcggca ttcttgtccg
1651 cccactcttt tagtgcatag ttcttctcct cctctagaaa ctctttatac
1701 gaagaagatg ggcccggatt gcaaaggaag atagtgggaa ttccgccttt
1751 aatttgaatc ggctttccgt atttcgtgtt gctttgccaa tcacgctggg
1801 cccccatgaa ctctttgaag tgctttagat aatgcgggtc gacgtcatca
1851 atgacgttgt accacgcatc gttgctgtat atctttggac tcaggtcaag
1901 gtgaccacac aggtaattat gtggtcctaa tgatcgggcc cacatcgtct
1951 ttcccgtacg actctcaccc tctaccacga tactcttagg tctccacggc
2001 cgcgcagcgg aagagcaaac gttcgttgat gcccaatcaa cgagctcagg
2051 cggtagcaac gtgaaagacg acatcggaaa aggacaaacg aaaggagcca
2101 caggctcttc gaagattcta tccaaatttg acttgatatt gtggtaatga
2151 aggacgaagt ccttcggtgc gagctccttg atcacagaca tagcctcccc
2201 tttattactc atgttaagcg ccgtggcgta ggcgtcgtta gctgtctgtt
2251 gtccacccct tgcagatcga ccgtcgattt gaaacttgcc ccactcgacg
2301 gtgtcgccgt ccttgtccag gtaagacttc acgtctgtac tggacttagc
2351 gctttgtatg ttggggtgga aacaggcgct acggcttggg tgtacatgat
2401 cgaagaggcg attgtctgtg atggtgatct ttccggcgaa ctgcaggagc
2451 acatggagat gaggttcccc attctggtgc agttctctgc acaccttgac
2501 gtattttagg ttcgacggaa gggagaggcc gactaaaaag gaaagtagct
2551 cttctttgga tagagagcac ctgggatatg tgaggaaaat gtttttcgct
2601 tgtattctaa aacggggagg cctcatgttg accagtcaat tggagacacc
2651 ccccagatca ctaacccctg tatattggag actggagaca atatatagaa
2701 gtagtaagag gtactactag gattttgaca cgtagcgggc atcctataat
2751 att