Sequence of DPV Angelica virus Y
Angelica virus Y isolate AnVY-l polyprotein gene, partial cds.
ACC No: EF488740
Dated: 2007-12-15 | Length: 1879 | CRC: 30143986
ID EF488740; SV 1; linear; genomic RNA; STD; VRL; 1879 BP.
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AC EF488740;
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DT 19-APR-2007 (Rel. 91, Created)
DT 15-DEC-2007 (Rel. 94, Last updated, Version 3)
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DE Angelica virus Y isolate AnVY-l polyprotein gene, partial cds.
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KW .
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OS Angelica virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus; unclassified Potyvirus.
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RN [1]
RP 1-1879
RX DOI; 10.1007/s00705-007-1003-4.
RX PUBMED; 17558540.
RA Robertson N.L.;
RT "Identification and characterization of a new virus in the genus Potyvirus
RT from wild populations of Angelica lucida L. and A. genuflexa Nutt., family
RT Apiaceae";
RL Arch. Virol. 152(9):1603-1611(2007).
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RN [2]
RP 1-1879
RA Robertson N.L.;
RT ;
RL Submitted (09-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL Arctic Plant Germplasm, United States Depart. of Agriculture, Agricultural
RL Research Service, 533 E. Fireweed Ave., Palmer, AK 99645, USA
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FH Key Location/Qualifiers
FH
FT source 1. .1879
FT /organism="Angelica virus Y"
FT /specific_host="Angelica lucida"
FT /isolate="AnVY-l"
FT /mol_type="genomic RNA"
FT /country="USA"
FT /collection_date="2006"
FT /virion
FT /db_xref="taxon:436007"
FT CDS <1. .1474
FT /codon_start=2
FT /product="polyprotein"
FT /db_xref="GOA:A4UTZ9"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="UniProtKB/TrEMBL:A4UTZ9"
FT /protein_id="ABO93585.1"
FT /translation="GQPSTVVDNTLMVVLAMTYALEKLEFRASDHKNICQYFVNGDDLL
FT LAVNPKYESILDSFQELFSQLGLKYTFDSRTRDKGDLWFMSHKGVKRGDIYIPKLEEER
FT IVSILEWDRSTKPEHRLEAICAAMVESWGYEWLTKEIRQFYSWVLEQAPYNEIAKEGKA
FT PYISEMALRQLYTSEQVTEQEIVSFLMRFEDLELDADEDFRVYHQGDKDNLNAGLPLIK
FT SKEKEEKASNNEPLSTNQNPESSGSLVPTNRDRDINAGTRGTYSVPKLKAINNKMRVPK
FT IKNKNSMNLEFLLTYSPEQCDITNTRATQAQYESWYEALKQDYRVSDAEMEIILSGLMV
FT WCLENGSSPNLNGMWTMMDGSEQREFPVKPLIDHAKPTFRQIMHHFSDVAVAYIEMRNM
FT TKPYMPGYGLKRNLRDRSLACYAFDFYEMASRSPERAREAHLQMKAAALKNSRTKLFGL
FT DGSVSANEEDTERHTVADVNRNMHSLLGMQGI"
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SQ Sequence 1879 BP; 607 A; 353 C; 423 G; 496 T; 0 other;
ef488740 Length: 1879 15-DEC-2007 Type: N Check: 9879 ..
1 tgggcagcct tcaactgtgg ttgataacac actcatggtt gtcttagcaa
51 tgacatacgc actagaaaaa cttgaatttc gagcatcgga tcacaaaaac
101 atttgtcaat actttgttaa tggcgacgac ttattgttag cagtcaatcc
151 taaatatgaa agcattctcg atagttttca agaattgttc tcacaactag
201 ggttgaagta cacattcgat agtcgaacta gagacaaagg agacttatgg
251 ttcatgtcac acaaaggtgt taagagaggt gacatttaca tacccaagct
301 agaagaagag agaatagttt ccatactcga atgggatcga tccacaaaac
351 cagagcatcg attggaagct atttgcgctg ctatggtaga atcatggggt
401 tatgaatggc tcactaagga gattaggcaa ttctacagct gggtgttgga
451 acaagcacca tacaacgaaa ttgccaaaga aggaaaggcc ccttacattt
501 ccgagatggc tttgcgacaa ctgtatacgt ccgagcaggt tacggagcaa
551 gagattgttt cattcctgat gcgattcgaa gatttagaat tggacgcaga
601 tgaagatttt agagtctatc atcaagggga taaagataat ttgaatgcgg
651 gcttacctct aatcaagtct aaggaaaagg aggaaaaggc atcaaataac
701 gaaccactat caacgaacca aaacccagaa tccagtggaa gtttggttcc
751 tacaaataga gatagggata taaacgcagg caccaggggc acttacagtg
801 ttccaaaact aaaagccatt aacaataaaa tgcgggtgcc aaaaattaaa
851 aacaaaaata gtatgaattt ggagtttctc ctaacatact caccagaaca
901 gtgtgacata acaaacacta gggcaaccca agctcagtat gaatcatggt
951 atgaagcgct taagcaagac taccgtgttt cagatgctga gatggaaatc
1001 atccttagtg gccttatggt ctggtgttta gagaatggga gttctccgaa
1051 cctcaacgga atgtggacga tgatggatgg ttctgagcag cgggaatttc
1101 ctgtaaaacc actcattgat cacgccaaac ccacgtttcg gcagataatg
1151 caccatttca gtgacgtagc tgtcgcgtac attgagatgc gtaatatgac
1201 caagccatac atgcctgggt atggtttgaa acgaaacttg agagaccgaa
1251 gtctcgcctg ctatgcgttc gacttctatg aaatggcgtc tcgatcacct
1301 gaaagggcga gagaggctca cctgcaaatg aaagcagcgg ctcttaagaa
1351 ctcaaggacc aagctatttg gacttgatgg cagtgttagc gctaatgaag
1401 aagacacgga aaggcacaca gttgctgatg tcaatcgcaa catgcattcc
1451 ttgcttggta tgcaaggaat ttaaattgtg cccagtattt gtatttatat
1501 cacatatgct atatctaagt ttaacataga tttagtaagg atttggatga
1551 aaagagtatg aagtgcaagc tccggccaat acaccatacc acctgaatac
1601 tccaataccc tgaaaggcta agttgagaat tgatataccg tatgttatca
1651 tatttaatta ctcgttttag agcttcttta ccgctttaca tcgtaactat
1701 gaaagttgga tgacggtatg cgcgatcctt agtgtgagtt tctcacgtgg
1751 gtactgtgcc gtttttctaa tatgtttagc ttatgtattg tcgaactaag
1801 tatgcgggct atcatgtagg gtgatttgat cacgtattgg tatcctttgt
1851 atttagcaag agaaaaaaaa aaaaaaaaa