Sequence of DPV Sida golden mosaic virus
Sida golden mosaic virus segment B, complete sequence.
ACC No: EF537046
Dated: 2007-05-08 | Length: 2545 | CRC: 1006731565
ID EF537046; SV 1; circular; genomic DNA; STD; VRL; 2545 BP.
XX
AC EF537046;
XX
DT 08-MAY-2007 (Rel. 91, Created)
DT 08-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE Sida golden mosaic virus segment B, complete sequence.
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KW .
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OS Sida golden mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2545
RA Ying Z., Davenport T.L., Zhang T.;
RT "Complete genome sequences of a Sida golden mosaic virus isolate from
RT Florida";
RL Unpublished.
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RN [2]
RP 1-2545
RA Ying Z., Davenport T.L., Zhang T.;
RT ;
RL Submitted (04-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Tropical Research and Education Center, University of Florida, 18905 SW 280
RL Street, Homestead, FL 33031, USA
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FH Key Location/Qualifiers
FH
FT source 1. .2545
FT /organism="Sida golden mosaic virus"
FT /segment="B"
FT /specific_host="Sida acuta"
FT /mol_type="genomic DNA"
FT /country="USA:Florida"
FT /db_xref="taxon:51034"
FT gene 537. .1307
FT /gene="BV1"
FT CDS 537. .1307
FT /codon_start=1
FT /gene="BV1"
FT /product="BV1"
FT /note="nuclear export protein; virus movement protein;
FT nuclear shuttle"
FT /protein_id="ABQ08587.1"
FT /translation="MYRFKNKRGLSFTPRRYYSRYNVFNRSTSSKKNDGKRRLGLSNKS
FT NDEPKMAAQRIHENQYSPEFVMTQNSAISTFISYPNLGKTEPSRSRSYIKLKRLRFRGT
FT VKIERVQSDVNMDGSSPKLEGVFSIVIVVDRKPHKGPSGSLHTFDELFGAMIHSHGNPR
FT ITPSLKDRFYIRHVSKHVISVDKDTTMFDVEGSTSLSNRRFNCWASFKDLERDSCNGVY
FT DNISKNSLLVYYCWMSDTMSKASNFVSFDLDYIG"
FT gene complement(1344. .2225)
FT /gene="BC1"
FT CDS complement(1344. .2225)
FT /codon_start=1
FT /gene="BC1"
FT /product="BC1"
FT /note="nuclear export protein; cell-to-cell movement
FT protein"
FT /protein_id="ABQ08588.1"
FT /translation="MDSQLVNPPSAFNYIESHRDEYQLCHDLTEIVLQFPSTAAQLTAR
FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKLKGKLKLSTAKHSVDIPFRAPTVKILS
FT KQFTDKDVDFSHVDYGKWERKPIRCASMSRVGSRGPIEIRPGESWASRSTLGLGQSDVD
FT SEIENELHPYRHLSRLGTTVLDPGESASVVGAQRAESNITMSLGQLNELVRTTVQECIN
FT SNCRASQPKSLQ"
XX
SQ Sequence 2545 BP; 683 A; 518 C; 526 G; 818 T; 0 other;
ef537046 Length: 2545 08-MAY-2007 Type: N Check: 5374 ..
1 tggcattttt gtaataatga gagggtcacc gattgaggct ctctcaaact
51 tgctctagca attggggaac ggggtctcat ttatactaga accctcaata
101 gaactctcaa tctcgttcgc acacgtggcg gccatccgca ataatattac
151 cggatggccg cgctttggtg cccccctggt gctctctctc acgagcctta
201 cccttggtgc gcccccccac gcgctctccc attggtgctg gtgttccacg
251 ctctcttttt cgtcggtcct ttaattcaaa ttaaagggtt atgctttatc
301 gcgcgttttg actattattt atcgcgatga ctgaccatgg cccattatac
351 ttggattatt gacgtggctc aattctcacc attctgctga gtctatttat
401 gatttatgtt gtacaagcat tttatattta tatttatttg gaaacaagta
451 tttaattttg ttatgagact cagctgtgcc ccacgtttat atatttacat
501 ataatcatcg tctatttatt aatattaaca gataaaatgt atcgttttaa
551 gaataaacgt gggttgtcat tcactccacg tcgatattat tcacgttaca
601 atgtgtttaa ccgatcaacc tcttctaaga agaacgacgg gaaacgacga
651 ctgggtcttt cgaataagtc taatgacgag ccaaagatgg cagcccaacg
701 cattcatgag aatcaatata gtccagagtt tgttatgaca caaaactccg
751 ccatctcaac cttcattagc tatcctaatc ttggtaagac agaacccagt
801 cgaagcaggt cttatataaa gttgaaacga ctccgtttta gagggactgt
851 gaagattgag cgtgttcaat cggatgtgaa tatggatggt tcgtctccta
901 aattagaagg agttttctct attgttatag ttgtggatcg taaacctcac
951 aagggtccga gtggtagtct tcatacattc gatgaactat tcggtgcaat
1001 gattcatagc catggtaatc ctagaataac tccgtctctg aaagatcgct
1051 tctatattcg acacgtgtcc aaacatgtga tatctgtcga taaggatacg
1101 acaatgtttg acgtggaagg gtctacatcg ctctctaata ggcgattcaa
1151 ttgctgggca tcgttcaagg atctggaacg cgactcatgc aatggtgtct
1201 atgacaacat tagcaaaaac tcgctattag tttattattg ctggatgtca
1251 gatacgatgt ctaaggcatc taattttgta tcgtttgatc tcgattatat
1301 cggatgatta ataaaataac attttattag ctacaataaa attctattgt
1351 aatgatttgg gctgagaagc cctacaatta ctattaatac actcttggac
1401 cgttgtcctg actaactcgt ttaattggcc caatgacatt gttatattgg
1451 attctgctct ctgggcccct acaaccgaag cagactctcc tgggtctaga
1501 actgttgtcc ccaacctgct cagatgtctg tatggatgta gctcgttctc
1551 tatttctgag tccacatctg attggcccaa tcctaatgta cttcttgaag
1601 cccatgattc accaggcctt atttcgattg ggcctcgtga cccaactctg
1651 gacatggatg cgcatcttat gggcttcctc tcccatttcc catagtccac
1701 atgggagaag tccacatctt tatctgtgaa ctgtttggat agtatcttca
1751 ccgtcggtgc ccggaaaggg atatccactg aatgttttgc tgtggacaat
1801 ttcagcttcc ctttaagttt ggcgaagtgg gtcctctgat gaacattcgt
1851 atctgaaact ctgtaataga gtttccatgg aattgggtct ttgagggaga
1901 agaaggaagc tgagaaatag tggagatcta tgttgcatct gatcgggaaa
1951 gtccacgacg cctgtaaaga ctcattgtct gtcattcgtt tgtcatgtat
2001 ctccactatt accgtcccgg aagcgttaat tgggacttgt tgtctgtact
2051 ctattacaca gtgatctatc ttcatacagc ttctgctaag tctcgccgtc
2101 aattgtgccg ccgtcgaagg aaattgcagc actatttcag ttaagtcatg
2151 gcatagctga tattcatctc tgtgcgactc tatatagttg aaggcacttg
2201 gaggattcac taactgagaa tccatctgag aaataatggc cgcgcagact
2251 gctctcggaa ttggaacttg gtgaatgaat aattagggtt tctatttctg
2301 aatagtcgat gatgtcattt taagaataaa tgactgactg gaaataaatt
2351 atgaactgat ttacgagaaa cccagaaatt tactgaagaa cattaagaac
2401 aatcgtttaa cctttccaga aattgttagt gttcttgaga aaggggagaa
2451 aatgaagagt aaagtgatgt ttattaaatg ttaaatctaa aagagtttat
2501 atagacattt gcttttttgt gatttatttg cagtcgttct attaa