Sequence of DPV Abaca bunchy top virus

Abaca bunchy top virus isolate Q1108 segment DNA-N, complete sequence.

ACC No: EF546802

Dated: 2008-02-06 | Length: 1073 | CRC: -579401593

                
ID   EF546802; SV 1; circular; genomic DNA; STD; VRL; 1073 BP.
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AC   EF546802;
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DT   06-FEB-2008 (Rel. 94, Created)
DT   06-FEB-2008 (Rel. 94, Last updated, Version 1)
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DE   Abaca bunchy top virus isolate Q1108 segment DNA-N, complete sequence.
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KW   .
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OS   Abaca bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus; unclassified Babuvirus.
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RN   [1]
RP   1-1073
RX   PUBMED; 17978886.
RA   Sharman M., Thomas J.E., Skabo S., Holton T.A.;
RT   "Abaca bunchy top virus, a new member of the genus Babuvirus (family
RT   Nanoviridae)";
RL   Arch. Virol. 153(1):135-147(2008).
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RN   [2]
RP   1-1073
RA   Sharman M., Thomas J.E., Skabo S.;
RT   ;
RL   Submitted (11-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL   Department of Primary Industries and Fisheries, Queensland Government,
RL   Plant Pathology Building, 80 Meiers Road, Indooroopilly, Brisbane,
RL   Queensland 4068, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1073
FT                   /organism="Abaca bunchy top virus"
FT                   /segment="DNA-N"
FT                   /specific_host="Musa textilis"
FT                   /cultivar="Luno"
FT                   /isolate="Q1108"
FT                   /mol_type="genomic DNA"
FT                   /country="Philippines"
FT                   /note="acronym: ABTV"
FT                   /db_xref="taxon:438782"
FT   CDS             237. .701
FT                   /codon_start=1
FT                   /product="putative nuclear shuttle protein"
FT                   /protein_id="ABP96956.1"
FT                   /translation="MDWFESQFKTCTHGCDWKAIAPDARDNIQVITCIDSGYGRKNPRR
FT                   VLLRSIQIGFNGSFKGNNRNVRGFLYVSIRQDDGELRPIMVVPFGGYGYHNDYYYFEGQ
FT                   SSTNCEIGSDYIPAGEDWSRDMEISISNSNNCTQECDIKCYVVCNLRIKE"
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SQ   Sequence 1073 BP; 341 A; 177 C; 268 G; 287 T; 0 other;

ef546802 Length: 1073  06-FEB-2008  Type: N  Check: 6473  ..

       1  ggcggggggg catattatta ccccccccgc ccgggacggg acattctgta
      51  atggattggg cttaatgatg ccaaaggccc attaagcgga agcgcggccc
     101  attcgatggc ctgtgcgctg gtttcaaatg tcgcgttccc gcctatttag
     151  ttgcttgccc tgcaagcaat taactagtct ataaataagg tggttctctg
     201  cgagtccaat acagcagttg cgataacata gcaacaatgg attggtttga
     251  atcacaattc aagacgtgta cgcatggatg cgactggaag gcgatagccc
     301  cagatgcaag agacaatata caggtaatta cttgtatcga ttcaggttat
     351  ggaagaaaga accctcgtag ggttcttcta agaagtattc agatagggtt
     401  caatggtagc ttcaaaggaa acaatagaaa cgttcgagga ttcctctacg
     451  tttctataag gcaagatgat ggggaattga gacctatcat ggttgtgcca
     501  tttggaggat atggatatca taatgactat tactatttcg aagggcaatc
     551  aagtacgaat tgtgagatag ggtcggatta tatcccggcc ggtgaagact
     601  ggagcagaga catggaaatc agtataagca acagcaacaa ttgtactcaa
     651  gagtgtgata taaaatgcta tgtggtatgt aacttaagaa ttaaggaata
     701  atatgttgct gaaagatctt atttaatgtt tagataatga tgttgtgctg
     751  tgaagtatct gtttatattt attataaaca cgctatgcca ataagggaaa
     801  aatgcaatta agacctgtca gattgtgtat atgaatgaat atacggccga
     851  aggccgtaag tatgaaatta gaaataattt ataagcactg gttaaatgta
     901  cgaagagatg tatataaccg aaagggtatg aacaataaca taataccata
     951  aaataataag gggcaatgaa agcagaatgc gtatgtaaca aaatgatgct
    1001  ctgagtacag gcttgcgtgc tctggacgcc actttagtgg tgggccagat
    1051  gtcccgagtt agtgcgctag tgg