Sequence of DPV Macroptilium yellow mosaic virus
Macroptilium yellow mosaic virus isolate Mona segment DNA-A, complete sequence.
ACC No: EF582840
Dated: 2008-05-20 | Length: 2631 | CRC: -12703071
ID EF582840; SV 1; circular; genomic DNA; STD; VRL; 2631 BP.
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AC EF582840;
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DT 08-MAY-2008 (Rel. 95, Created)
DT 20-MAY-2008 (Rel. 95, Last updated, Version 2)
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DE Macroptilium yellow mosaic virus isolate Mona segment DNA-A, complete
DE sequence.
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KW .
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OS Macroptilium yellow mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2631
RA Amarakoon I.I., Roye M.E., Briddon R.W., Bedford I.D., Stanley J.;
RT "Molecular and biological characterization of Macroptilium yellow mosaic
RT virus from Jamaica";
RL Plant Pathol. 57(3):417-426(2008).
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RN [2]
RP 1-2631
RA Amarakoon I.I., Roye M.E., Stanley J.;
RT ;
RL Submitted (25-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology Centre, The University of the West Indies, Mona, 2 St. John's
RL Close, Kingston 6, Jamaica
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FH Key Location/Qualifiers
FH
FT source 1. .2631
FT /organism="Macroptilium yellow mosaic virus"
FT /segment="DNA-A"
FT /specific_host="Macroptilium lathyroides"
FT /isolate="Mona"
FT /mol_type="genomic DNA"
FT /country="Jamaica"
FT /clone="MacA14"
FT /db_xref="taxon:169865"
FT gene 209. .961
FT /gene="CP"
FT CDS 209. .961
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /protein_id="ABU62837.1"
FT /translation="MPKRDAPWRLMAGTSKVSRTGNYSRNGGLGQGSNKNAWVNRPMYR
FT KPRIYRMYRSSDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRFC
FT VKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVK
FT NDLRDRFQVMHRFHAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALL
FT LYMACTHASNPVYATLKIRIYFYDSITN"
FT gene complement(958. .1356)
FT /gene="REn"
FT CDS complement(958. .1356)
FT /codon_start=1
FT /gene="REn"
FT /product="replication enhancer protein"
FT /protein_id="ABU62840.1"
FT /translation="MDSRTGENITARQAENSVFIWEVPNPLYFKIIMVEDPPFTQTRIY
FT HIQVRANHNVRKALGLHKAFFNFQVWTTLTTASGTTYLNRFKYLVQMYLDQIGLVGINN
FT VIRAVRFATDRSYVNYVLENHEIKFKFY"
FT gene complement(1103. .1621)
FT /gene="TrAP"
FT CDS complement(1103. .1621)
FT /codon_start=1
FT /gene="TrAP"
FT /product="transcription activator protein"
FT /protein_id="ABU62839.1"
FT /translation="MESRFKLKEVSHQSCCAILVRVPVIKTSSVKKKTELYTTGPFTMR
FT SSSPSQPPSIKAQHRLAKRRAIRRRRLDLNCGCSIFLHINCHDHGFTHRGEHHCASGRE
FT FRFYLGGSKSPLFQDHHGGGSTIHPNKDLPHTSQSQPQRAESVGSPQSLLQLPSLDDID
FT DSFWDDIFK"
FT gene complement(1428. .2489)
FT /gene="Rep"
FT CDS complement(1428. .2489)
FT /codon_start=1
FT /gene="Rep"
FT /product="replication protein"
FT /protein_id="ABU62838.1"
FT /translation="MPPPKRFRVSSKNYFLTYPHCSLSKEEALSQLQNISTPTNKKFIK
FT ICEELHEDGQPHLHVLIQFEGKFVCTNNRLFDLVSPSRSAHFHPNIQGAKSSSDVKSYL
FT DKDGVTVEWGEFQVDGRSARGGCQSANDSYAKALNASSVEQALQILKEEQPKDFLLQHH
FT NIRSNLERIFTKVPEPWVPPFHLSSFTNVPAEMQAWVDGYFGRGAAARPERYMSIIVEG
FT DSRTGKTMWARSLGPHNYLMGHLDFNSRVYSNAAEYNVIDDISPNYLKLKHWKELIGAQ
FT RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLGKEENRALHNWTIHNALFITLT
FT APLYQSTASPCQT"
FT gene complement(2075. .2332)
FT /gene="AC4"
FT CDS complement(2075. .2332)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="ABU62841.1"
FT /translation="MGSLISMCLSSSKGNSSARITDYSTWSPHPGQHISIQTFKELNRV
FT PTSSPISTRMESQSNGENSRSTVEVLEEAARVLTTHTPRH"
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SQ Sequence 2631 BP; 684 A; 551 C; 631 G; 765 T; 0 other;
ef582840 Length: 2631 20-MAY-2008 Type: N Check: 6300 ..
1 accggatggc cgcgcccccc ccccttcttt tccgtacgcc aaccacgtgc
51 gcctttaatt taaattaaag ataactattt ttgaccgacc aatcatattg
101 cgtgtgtgtg gtctttttaa tgcgttacaa cttggtcccc aagttgttcg
151 ccatataagt ttaatttaaa ttaataattg ttgtgcccaa accacgtgta
201 agtccaggat gcccaagagg gatgccccgt ggcgtttgat ggcgggaacc
251 tcaaaggttt cccgcactgg caattattct cgaaatggtg gtttgggcca
301 agggtccaac aaaaacgctt gggtgaacag gcccatgtac aggaagccca
351 ggatttatcg gatgtacaga tcatccgatg tgcccaaggg atgtgaagga
401 ccttgcaagg tccaatccta tgaacagcga catgatatct ctcatgttgg
451 taaggtgatg tgtatttctg acattactcg tggtaatggt attactcatc
501 gtgtagggaa gcgtttttgt gtgaaatctg tgtatatttt agggaagata
551 tggatggatg agaacatcaa gctcaagaat cacacaaata gcgttatatt
601 ttggttggtg cgtgatcgtc gtccctatgg aacacctatg gactttggac
651 aggtgttcaa catgtttgat aatgagccca gtacagctac cgtgaagaac
701 gatcttcgtg atcgtttcca agtgatgcac agatttcatg ctaaggtgac
751 tggtggccaa tatgcaagta atgaacaggc attggtaagg cgattttgga
801 aggtgaacaa ccatgtcgtg tacaaccacc aggaagctgg gaaatacgag
851 aatcatactg agaacgcact attattgtat atggcatgta ctcatgcctc
901 aaaccctgta tatgcgacat tgaaaattcg gatctatttc tatgattcga
951 tcaccaatta ataaaatttg aattttattt catgattttc gagcacataa
1001 tttacataag atctgtctgt tgcaaagcga acagctctaa ttacattgtt
1051 tatccctaca agtccaattt gatcaagata catttgaaca agatatttaa
1101 atctatttaa atatgtcgtc ccagaagctg tcgtcaatgt cgtccagact
1151 tggaagttga agaaggcttt gtggagaccc aacgctttcc gcacgttgtg
1201 gttggctctg acttgtatgt ggtagatcct tgtttgggtg aatggtggat
1251 cctccaccat gatgatcttg aaatagaggg gatttggaac ctcccagata
1301 aaaacggaat tctctgcctg acgcgcagtg atgttctccc ctgtgcgtga
1351 atccatgatc gtggcaattg atatggagaa atatggaaca gccgcagttc
1401 aagtctaagc gtcgtcgacg aatggcccta cgtttggcaa ggcgatgctg
1451 tgctttgata gaggggggct gtgagggtga tgaagagcgc attgtgaatg
1501 gtccagttgt gtaaagctcg gttttcttct ttaccgagga agtctttata
1551 actggcaccc tcaccaggat tgcacagcac gattgatggg atacctcctt
1601 taatttgaac cggctttcca tatttacagt ttgactgcca gtccctttga
1651 gccccaatta actctttcca atgctttaac ttcaaataat tggggcttat
1701 gtcatcaatg acgttgtact cagcggcatt ggagtagaca cgcgaattga
1751 agtcgaggtg acccatgaga taattgtgtg gtcccaatga acgagcccac
1801 attgttttgc ctgttcttga gtcaccctcg acgatgatac tcatatatct
1851 ctccggccgc gcagcggcac ccctcccgaa ataaccatcg acccacgctt
1901 gcatctcagc cggaacgtta gtaaaggagg agaggtgaaa tggaggaacc
1951 catggttccg gaaccttggt aaagatccgt tctaggttag aacggatgtt
2001 atggtgctgg agaaggaaat ctttgggctg ctcctccttt aatatttgaa
2051 gtgcctgttc gactgatgag gcattcaatg ccttggcgta tgagtcgtta
2101 gcactctggc agcctcctct agcacttcga ccgtcgacct ggaattctcc
2151 ccattcgact gtgactccat ccttgtcgag ataggacttg acgtcggaac
2201 tcgatttagc tccttgaatg tttggatgga aatgtgctga ccgggatggg
2251 gagaccaggt cgaataatct gttattcgtg cagacgaatt tcccttcgaa
2301 ctggataagc acatggagat gaggctgccc atcttcgtgt agttcctcac
2351 atattttgat gaacttcttg tttgtgggag tggaaatatt ttgtaattgg
2401 gaaagagcct cctctttcga tagagagcag tgaggatatg tgaggaaata
2451 gtttttggaa ctcactctaa atctctttgg tggtggcata cttgtaaata
2501 agagagtgtc accaattcga gctctctcaa actctcgcta tgttttggtg
2551 actggtgtac aatatatact agtaccctta atctcgtgaa taacgagatt
2601 cacacacgtg gcggccatcc gatataatat t