Sequence of DPV Potato virus Y

Potato virus Y isolate AQ1 polyprotein gene, partial cds.

ACC No: EF592513

Dated: 2010-12-02 | Length: 1131 | CRC: -288124135

                
ID   EF592513; SV 1; linear; genomic RNA; STD; VRL; 1131 BP.
XX
AC   EF592513;
XX
DT   01-DEC-2010 (Rel. 107, Created)
DT   02-DEC-2010 (Rel. 107, Last updated, Version 2)
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DE   Potato virus Y isolate AQ1 polyprotein gene, partial cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1131
RA   Liu J., Yu X., Tian Y., Gao R., Zhu X., Li X.;
RT   "3'- terminal genomic sequence of Potato virus Y";
RL   Unpublished.
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RN   [2]
RP   1-1131
RA   Liu J., Yu X., Tian Y., Gao R., Zhu X., Li X.;
RT   ;
RL   Submitted (05-MAY-2007) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1131
FT                   /organism="Potato virus Y"
FT                   /host="tobacco"
FT                   /isolate="AQ1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ABU95020.1"
FT                   /translation="GNDTIDAGGSNKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVP
FT                   RIKAITPKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQSRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     <1. .801
FT                   /product="coat protein; CP"
FT   3'UTR           805. .1131
XX
SQ   Sequence 1131 BP; 348 A; 202 C; 268 G; 313 T; 0 other;

ef592513 Length: 1131  02-DEC-2010  Type: N  Check: 7333  ..

       1  ggaaacgaca caatcgatgc aggaggaagc aataagaagg atgcaaaaca
      51  agagcaaggt agcattcaac caaatctcaa caaagaaaag gagaaggacg
     101  tgaatgttgg aacatctgga actcatactg tgccacgaat taaagccatc
     151  acgcctaaaa tgagaatgcc caagagtaag ggtgcaactg tactgaactt
     201  agaacattta ctcgagtatg ctccacagca aattgatatc tcaaatactc
     251  gagcgactca atcacagttt gatacatggt atgaagcagt acagcttgct
     301  tacgacatag gagaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gagaatggaa cctcgccaaa catcaacggt gtctgggtta
     401  tgatggatgg aaatgaacaa gttgaatacc cactcaagcc gattgttgaa
     451  aatgcaaaac caacccttag gcaaattatg gcacatttct cagatgttgc
     501  agaagcgtat attgaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttggt tcgaaatctg cgtgatggaa gtctggctcg ttatgccttt
     601  gacttttatg aagttacatc acgtacacca gtaagggcta gagaggcaca
     651  cattcaaatg aaagccgcag ctctgaaatc agctcaatcc cgacttttcg
     701  gattggatgg tggcattagt acacaagagg aaaacacaga gaggcacacc
     751  accgaggatg tttctccaag tatgcatact ctacttggag tgaagaacat
     801  gtgattatag tgtctttccg gacgatatat aaatatttat gtttgcagta
     851  agtattttgg cttttcctgt actactttta tcgtaactaa taatcatttt
     901  gaatattact ggcagatagg ggtggtatag cgattctgtc gttgtagtga
     951  ccttagctgt cgtttctgta ttattatgtt tgtgtaaaag tgccgggttg
    1001  ttgttgttgt ggctgatcca tcgattaggt ggtgttgcga ttcgtcgtag
    1051  cagtgactat gtctggattt agttacttgg gtgatgttgt gattctgtca
    1101  tagcagtgac tgtaaacttc aatcaggaga c