Sequence of DPV Kenaf leaf curl virus

Kenaf leaf curl virus clone LCCP-NI-Bah-02 coat protein (AV1) gene, complete cds.

ACC No: EF620563

Dated: 2007-06-24 | Length: 771 | CRC: 1159323252

                
ID   EF620563; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
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AC   EF620563;
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DT   24-JUN-2007 (Rel. 92, Created)
DT   24-JUN-2007 (Rel. 92, Last updated, Version 1)
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DE   Kenaf leaf curl virus clone LCCP-NI-Bah-02 coat protein (AV1) gene,
DE   complete cds.
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KW   .
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OS   Kenaf leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
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RN   [1]
RP   1-771
RA   Paul S., Ghosh R., Das S., Palit P., Acharyya S., Mir J.I., Roy A.,
RA   Chaudhuri S., Ghosh S.K.;
RT   "Variability of coat protein gene of the Begomovirus and satellite DNA beta
RT   associated with leaf curl disease of Kenaf (Hibiscus cannabinus) from
RT   different location of eastern and northern India";
RL   Unpublished.
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RN   [2]
RP   1-771
RA   Paul S., Ghosh R., Das S., Palit P., Acharyya S., Mir J.I., Roy A.,
RA   Chaudhuri S., Ghosh S.K.;
RT   ;
RL   Submitted (19-MAY-2007) to the EMBL/GenBank/DDBJ databases.
RL   Crop Protection, Central Research Institute For Jute & Allied Fibres,
RL   Barrackpore, Kolkata, West Bengal 700120, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Kenaf leaf curl virus"
FT                   /specific_host="Hibiscus cannabinus"
FT                   /mol_type="genomic DNA"
FT                   /country="India:North India, Bahraich"
FT                   /clone="LCCP-NI-Bah-02"
FT                   /db_xref="taxon:449400"
FT   gene            1. .771
FT                   /gene="AV1"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="ABR19757.1"
FT                   /translation="MSKRAADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWA
FT                   NRPMNRKPRLYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
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SQ   Sequence 771 BP; 201 A; 157 C; 198 G; 215 T; 0 other;

ef620563 Length: 771  24-JUN-2007  Type: N  Check: 5913  ..

       1  atgtcgaagc gagctgccga tatcgtcatt tctactcccg cgtcgaaggt
      51  gcgtcgtcgt ctgaacttcg acagccccta tgcaacccgt gcagttgtcc
     101  ccactgtccg cgtcacaaaa tctcgcatgt gggcgaacag gcccatgaat
     151  cgcaagccca gactgtacag gatgtacaga agccctgatg ttccaagagg
     201  gtgtgagggt ccatgtaagg tccagtcatt tgagtctaga cacgatgtag
     251  tccatatagg gaaggtcatg tgtattagtg atgttactcg cggtactggg
     301  ttgacccata gagttgggaa acgtttctgt gtcaagtcag tttatgtttt
     351  gggtaagatc tggatggatg aaaatataaa gtccaagaat cacactaaca
     401  atgtgatgtt ctttcttgtt cgtgatcgac gtccggttga caagcctcag
     451  gattttggag aggtcttcaa catgtttgac aacgaaccta gcactgctac
     501  tgtgaagaat gtgcatcggg atcgttacca ggtcttgagg aaatggtatg
     551  caactgtcac tggtggacag tatggtgcga aggaacaggc tttagttaag
     601  aagtttgtta gggttaataa ttatgttgtt tacaatcagc aagaggcagg
     651  gaaatacgag aatcattctg agaatgccct gatgttgtat atggcatgta
     701  cccatgcctc taatcctgtt tacgccactc ttaagattag gatctacttc
     751  tacgactctg taacgaattg a