Sequence of DPV Tomato chlorotic dwarf viroid

Tomato chlorotic dwarf viroid isolate 3816013, complete genome.

ACC No: EF626530

Dated: 2010-01-16 | Length: 356 | CRC: -1759271488

                
ID   EF626530; SV 1; circular; genomic RNA; STD; VRL; 356 BP.
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AC   EF626530;
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DT   26-JUN-2007 (Rel. 92, Created)
DT   16-JAN-2010 (Rel. 103, Last updated, Version 2)
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DE   Tomato chlorotic dwarf viroid isolate 3816013, complete genome.
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KW   .
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OS   Tomato chlorotic dwarf viroid
OC   Viroids; unclassified viroids.
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RN   [1]
RP   1-356
RA   Verhoeven J.T.J., Jansen C.C.C., Botermans M., Roenhorst J.W.;
RT   "Epidemiological evidence that vegetatively propagated, solanaceous plant
RT   species act as sources of Potato spindle tuber viroid inoculum for tomato";
RL   Plant Pathol. 59(1):3-12(2010).
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RN   [2]
RP   1-356
RA   Verhoeven J.T.J., Jansen C.C.C., Roenhorst J.W.;
RT   "First infections of tomato chlorotic dwarf viroid in Brugmansia sanguinea
RT   in the Netherlands";
RL   Unpublished.
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RN   [3]
RP   1-356
RA   Jansen C.C.C.;
RT   ;
RL   Submitted (23-MAY-2007) to the EMBL/GenBank/DDBJ databases.
RL   Virology, Plant Protection Service, PO Box 9102, Wageningen 6700HC, The
RL   Netherlands
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DR   RFAM; RF00362; Pospi_RY.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .356
FT                   /organism="Tomato chlorotic dwarf viroid"
FT                   /host="Brugmansia sanguinea"
FT                   /isolate="3816013"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /db_xref="taxon:100785"
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SQ   Sequence 356 BP; 75 A; 103 C; 99 G; 79 T; 0 other;

ef626530 Length: 356  16-JAN-2010  Type: N  Check: 1544  ..

       1  cggaactaaa ctcgtggttc ctgtggttca cacctgacct cctgtgcaga
      51  aaagaaaaaa gaaggcggct cggaggagcg cttcagggat ccccggggaa
     101  acctggagcg aactggcaaa aggcggcagg gagcttgtgg aaggcgaaac
     151  aggagtaatc cgcgcagaaa caggattttc atccttcctt tcttcgcgtt
     201  tccttccttt gcgcgccact cgacccctcg cccccttgcg ctgtcgcttc
     251  ggcaactacc cggtggaaac aactgaagct cccgagaacc gctttttctc
     301  tatcttgctg ctaccggggc gagggtgttt agcccttgga accgcagttg
     351  gttcct