Sequence of DPV Potato virus X
Potato virus X strain Tula, complete genome.
ACC No: EU021215
Dated: 2007-08-13 | Length: 6435 | CRC: -90377181
ID EU021215; SV 1; linear; genomic RNA; STD; VRL; 6435 BP.
XX
AC EU021215;
XX
DT 13-AUG-2007 (Rel. 92, Created)
DT 13-AUG-2007 (Rel. 92, Last updated, Version 1)
XX
DE Potato virus X strain Tula, complete genome.
XX
KW .
XX
OS Potato virus X
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-6435
RA Mardanova E.S., Kotliarov R.Y., Kolganova T.V., Kuznetsov B.B., Ravin N.V.,
RA Atabekov J.G., Skryabin K.G.;
RT "The complete nucleotide sequence of Potato virus X strain tula";
RL Unpublished.
XX
RN [2]
RP 1-6435
RA Mardanova E.S., Kotliarov R.Y., Kolganova T.V., Kuznetsov B.B., Ravin N.V.,
RA Atabekov J.G., Skryabin K.G.;
RT ;
RL Submitted (06-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL Lab of Molecular Cloning, Centre ''Bioingeneering'' Ras, Prosp. 60-Let
RL Oktiabria, Bld. 7-1, Moscow 117312, Russia
XX
FH Key Location/Qualifiers
FH
FT source 1. .6435
FT /organism="Potato virus X"
FT /strain="Tula"
FT /mol_type="genomic RNA"
FT /country="Russia"
FT /db_xref="taxon:12183"
FT gene 85. .4455
FT /gene="RdRp"
FT CDS 85. .4455
FT /codon_start=1
FT /gene="RdRp"
FT /product="RNA-dependent RNA polymerase"
FT /protein_id="ABS87398.1"
FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV
FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM
FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTETAYISDTLHFLDPSYIVETFQ
FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ
FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR
FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS
FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG
FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL
FT DCFTRMPAYAVNAEEDLAAISKTPGMDVSQEVKEPAGDRNQYLNPAETFLNKLHRKHSR
FT EVKHQAVKKAKRLAEIQESMRAEGEAKSNEMSGGMGAIPSNAELPSTSDARQELTLPTT
FT KPVPARWEDASFTDSSVEEEPVKLPGKEAVETATQQVIEGLPWKHWIPQLNAVGFKALE
FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELLAMNRSPATIPLDLLRARDYGS
FT DVKNKRIGAITKTQATSWGEYLTGKIESLAERKVATCVIHGAGGSGKSHAIQKALREIG
FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE
FT ALICFYSKIKLVILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD
FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRRLYMGTGRNDTFTYAGCQGLTK
FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV
FT REQALREYEPAEAAPIQEPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC
FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA
FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV
FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS
FT AWALNNWNFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI
FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF
FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC
FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL"
FT gene 4486. .5166
FT /gene="TGB-1"
FT CDS 4486. .5166
FT /codon_start=1
FT /gene="TGB-1"
FT /product="triple-gene-block protein 1"
FT /protein_id="ABS87399.1"
FT /translation="MDILIISLKSLGYSRTSKSLNSGPLVVHAVAGAGKSTALRKLILR
FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA
FT PEFSLEPHFYLETSFRVPKKVADLIAGCGFDFETNSQEEGHLEITGIFRGPLLGKVIAI
FT DEESETTLSRHGVEFVKPCQVTGLEFKVVTIVSAAPIEEIGQSTAFYNAITRSKGLTYV
FT RAGT"
FT gene 5147. .5494
FT /gene="TGB-2"
FT CDS 5147. .5494
FT /codon_start=1
FT /gene="TGB-2"
FT /product="triple-gene-block protein 2"
FT /protein_id="ABS87400.1"
FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNNLPHVGDN
FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKHISQRNH
FT TCACGNNHSSH"
FT gene 5427. .5639
FT /gene="TGB-3"
FT CDS 5427. .5639
FT /codon_start=1
FT /gene="TGB-3"
FT /product="triple-gene-block protein 3"
FT /protein_id="ABS87401.1"
FT /translation="MEVNTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA
FT CKLDAETIRAIADLKPLSVERLSFH"
FT gene 5650. .6363
FT /gene="cp"
FT CDS 5650. .6363
FT /codon_start=1
FT /gene="cp"
FT /product="coat protein"
FT /protein_id="ABS87402.1"
FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT AVVASNAVATNEDLSKIEAIWKEMKVPADTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT TGTTTAEAVVTLPPP"
XX
SQ Sequence 6435 BP; 1984 A; 1512 C; 1461 G; 1478 T; 0 other;
eu021215 Length: 6435 13-AUG-2007 Type: N Check: 6593 ..
1 gaaaactaaa ccatacacca acaacaaaac caaacccacc acgcccaatt
51 gttacacacc cgcttgaaaa agcaagtctg acaaatggcc aaagtgcgcg
101 aggtttatca atcctttaca gactccacca caaaaactct tatccaagat
151 gaggcttata gaaatattcg tcccatcatg gaaaaacata aactagctaa
201 cccatacgct cagacggttg aagcggctaa tgatctagag gggttcggca
251 tagccaccaa tccctatagc attgaattgc atacacatgc agccgctaag
301 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga
351 acctgtcaca tttatgttcc ttaaacccag gaagctaaac tacatgagaa
401 gaaacccgcg gattaaggac attttccaca atgttgccat tgaaccgaga
451 gacgtagcaa ggtaccccaa ggagacaata attgacaaac tcacagagat
501 cacaacggaa acagcctaca ttagtgatac tctgcatttc ttggatccga
551 gctacatagt ggagacattc caaaactgcc caaaattgca aacattgtat
601 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg aaagcactca
651 cccgaacata tacagcctca aatatttcgg agatggtttc cagtatatac
701 caggcaacca tggtggtgga gcataccatc atgaatttgc tcatttacaa
751 tggctcaaag tgggaaagat caagtggagg gaccctaagg atagctttct
801 cggacatctc aattacacga ctgagcaggt cgagatgcac acagtgacag
851 tacagttgca ggaatcgttc gcggcaaacc acttgtactg catcaggaga
901 ggagacttgc tcacaccgga ggtgcgcact ttcggccaac ctgacaggta
951 tgtgattcca ccacagatct ttctcccgaa agttcacaac tgcaagaagc
1001 caattcttaa gaagactatg atgcagctct tcttgtatgt taggacagtc
1051 aaggtcgcaa aaaattgtga catttttgcc aaagtcagac aactaattaa
1101 atcatctgac ttagacaaat attcagctgt agaactggtt tacttagtaa
1151 gctatatgga gttccttgcc gatttacaag ctaccacttg cttctcagac
1201 acactttctg gtggcttact aacaaagacc cttgcgccgg tgagggcttg
1251 gatacaagag aaaaagatgc agctgtttgg tcttgaggat tacgcgaagt
1301 tagtcaaagc agttgatttc cacccagtgg atttttcttt caaggttgaa
1351 acttgggact tcagattcca ccccttgcaa gcgtggaaag ccttccgacc
1401 aagggaagtg tcggatgtag aggaaatgga gagtttgttc tcagatgggg
1451 acctgcttga ttgcttcaca agaatgccag cttacgcagt aaacgcagag
1501 gaagatttgg ctgctatcag taaaacgcct gggatggatg tcagtcaaga
1551 agttaaagaa cctgcaggag acagaaatca atacttaaac cctgcagaaa
1601 ctttcctcaa caagctccac aggaaacaca gtagggaggt gaaacatcag
1651 gccgtaaaga aagctaaacg cctagctgaa atccaggagt ccatgagagc
1701 tgaaggtgag gccaaatcaa atgagatgag cgggggcatg ggggcaatac
1751 ctagcaatgc cgaacttccc agcacgagcg atgccagaca agagctcaca
1801 ctcccaacta ctaaacctgt tcctgcaagg tgggaagatg cttcattcac
1851 agattctagt gtggaagagg agccggtgaa actccctgga aaagaagccg
1901 ttgaaacagc gacgcaacaa gtcatcgaag ggctcccctg gaaacactgg
1951 attcctcaac taaacgctgt tggattcaag gcactggaga ttcagaggga
2001 caggagtgga acaatgatca tgcccatcac agaaatggtc tccgggttgg
2051 aaaaagagga cttcccggaa ggaaccccaa aagagttggc acgagaattg
2101 cttgctatga acagaagccc tgccaccatc cctttagacc tgcttagagc
2151 cagagactac ggcagtgatg tgaagaacaa gagaattggt gcaatcacaa
2201 agacacaggc aacgagttgg ggcgagtacc taacaggaaa gatagaaagc
2251 ttggctgaga ggaaagttgc aacttgtgtc attcatggag ctggaggctc
2301 tgggaaaagt catgccatcc aaaaggcatt aagagagatt ggcaagggct
2351 cggatatcac cgtagtcctg ccgaccaatg agctgcgact agattggagt
2401 aagaaagtgc caaacactga accatatatg ttcaagacat atgagaaggc
2451 attaattggg ggaacaggca gtatagtcat ctttgacgat tactcaaaac
2501 ttcctcccgg ttacatagaa gccttaatct gtttctactc taaaattaag
2551 ctagtcattc taacaggaga tagcagacag agcgtctacc atgaaactgc
2601 tgaagacgcc tccatcaggc atttgggacc agcaaccgaa tacttctcaa
2651 aatactgccg atactatctc aatgctacac accgcaacaa gaaagacctt
2701 gcgaacatgc ttggtgtcta cagtgagagg acgggagtca ccgaaatcag
2751 catgagcgcc gagttcttag agggaatccc aaccttagtg ccctcggatg
2801 aaaagagaag gctgtacatg ggcaccggga ggaatgacac gttcacatat
2851 gctggatgcc aggggctaac taagccaaaa gtgcaaatag tattggacca
2901 caacacccaa gtgtgtagtg cgaatgtgat gtacacagca ctttctagag
2951 ccaccgacag gattcacttc gtgaacacaa gtgcaaactc ttcggccttc
3001 tgggaaaagt tagacagcac cccctatctc aagactttcc tatcagtggt
3051 gagagaacaa gcactcaggg agtacgagcc ggcagaggca gcgccaattc
3101 aagagcctga gccccagaca cacatgtgcg tagagaatga ggagtctgtg
3151 ctagaggagt acaaagagga actcttggaa aagtttgaca gagagatcca
3201 ctctgaatcc catggtcatt caaactgtgt ccaaactgaa gacacgacca
3251 ttcagttgtt ttcgcatcaa caagcaaaag atgagaccct cctctgggcg
3301 actattgatg cgcgcctcaa gaccagtaat caagagacaa acttccgaga
3351 attcttgagc aagaaggaca ttggggacgt tctgtttttg aactaccaga
3401 aagcaatggg tctgcccaaa gagcgtattc ctttctcaca agaggtttgg
3451 gaagcttgtg cccatgaagt acaaagcaag tacctcagta agtccaagtg
3501 caatttgatt aatggaactg tgagacagag cccagatttt gatgaaaaca
3551 aaattatggt cttcctcaag tcgcagtggg ttacaaaagt ggaaaaacta
3601 ggcctaccca agattaagcc aggtcaaacc atagcagctt tttaccagca
3651 gactgtgatg ctttttggga ctatggctag gtacatgcga tggttcagac
3701 aggctttcca gccaaaagaa gtcttcataa attgtgagac cacgccagaa
3751 gacatgtctg cctgggcctt gaacaactgg aatttcggca gacctagctt
3801 ggctaatgac tacacagctt ttgaccagtc tcaggatgga gctatgctac
3851 aatttgaggt gctcaaagcc aagcaccact gcataccaga ggaaatcatc
3901 caagcataca tagacattaa gaccaatgca cagattttcc taggcacatt
3951 gtcaattatg cgcctaactg gtgaaggccc cacctttgat gcaaacactg
4001 agtgcaacat agcttacacc catacaaagt ttgacatccc agccggaact
4051 gctcaagttt atgcaggaga cgactcagca ctggattgcg ttccagaagt
4101 gaaacatagt ttccacaggc tcgaagacaa attactcctt aagtcaaagc
4151 ccgtaatcac gcagcaaaag aaaggcagtt ggcctgagtt ttgtggctgg
4201 ctaatcacac caaaaggggt aatgaaagac ccaattaaac tccatgtcag
4251 cttaaaatta gccgaggcta agggtgaact caagaaatgt caagattcct
4301 atgaaattga tctgagttat gcctatgacc acaaggactc tctgcatgac
4351 ttgttcgatg aaaaacagtg tcaggcacac acactcacct gcaggacact
4401 aattaaatca gggagaggca ctgtctcact tccccgtctc agaaactttc
4451 tttaaccgtt aagttacctt atagatttga ataagatgga tattctcatc
4501 attagtttga aaagtttagg ttattctagg acttctaaat ctttaaattc
4551 aggacctttg gtagtacatg cagtagctgg agccggtaag tccacagccc
4601 taagaaagtt gatccttaga cacccaacat tcaccgtgca tacactcggt
4651 gttcctgaca aagtgagcat caggactaga ggcatacaga aaccaggacc
4701 tattcctgag ggcaatttcg caatccttga tgagtacact ttggataaca
4751 ccacaaggaa ctcataccag gcactttttg ctgatcctta tcaggcacct
4801 gagtttagcc tagagcccca cttctacttg gaaacctcat ttcgagttcc
4851 gaagaaagtg gcagatttga tagcaggttg tggcttcgat ttcgagacca
4901 actcacagga agaagggcac ttggagatca ctggtatatt tagagggccc
4951 ttacttggga aggtgatagc cattgacgag gagtctgaga caacactgtc
5001 caggcatggt gttgagtttg ttaagccctg ccaagtgact ggacttgagt
5051 tcaaagtagt cactattgtg tctgccgcac caatagagga aattggccag
5101 tccacagctt tttacaacgc catcaccagg tcaaagggat tgacatatgt
5151 ccgcgcaggg acatagactg accgctccgg tcaattctga aaaagtgtac
5201 atagtattag gtctatcatt tgctttagtt tcaattacct ttctgctttc
5251 tagaaataat ttaccccacg tcggtgacaa cattcacagc ttgccacacg
5301 gaggagctta cagagacggc accaaagcaa ttttgtacaa ctctccgaat
5351 ctagggtcac gagtgagtct acataacgga aagaacgcag cctttgctgc
5401 cgttttgcta ctgactttgc tgatctatgg aagtaaacac atatctcaac
5451 gcaatcatac ttgtgcttgt ggtaacaatc atagcagtca ttagtacttc
5501 tttagtgagg accgaacctt gtgtcatcaa gattactgga gaatcaatca
5551 cagtgttggc ttgcaaatta gatgcagaaa ccatcagagc cattgccgat
5601 ctcaagccac tctccgttga acggttaagt ttccattaat acccgaaaga
5651 tgtcagcacc agctagcaca acacaggcca cagggtcaac tacctcaacc
5701 accacaaaaa ctgcaggcgc aactcctgcc acagcttcag gactgttcac
5751 catcccggat ggagatttct ttagcacagc ccgtgccgta gtagccagca
5801 atgccgttgc aacaaatgaa gaccttagca agattgaggc catttggaag
5851 gaaatgaagg tgcccgcgga cactatggca caggctgctt gggacttagt
5901 aagacactgt gctgatgtag gctcatctgc tcaaacagaa atgatagaca
5951 caggtcccta ctccaacggc atcagtagag ctagactggc agcagcaatt
6001 aaagaggtgt gcacacttag gcaattttgc atgaagtatg cgccagtggt
6051 atggaactgg atgttgacta ataacagtcc acctgccaac tggcaagcac
6101 aaggtttcaa gcctgagcac aaattcgctg cattcgactt cttcaatgga
6151 gtcactaacc cagctgctat catgcctaaa gagggactca ttcggccacc
6201 atctgaagct gaaatgaatg ctgcccaaac tgctgccttc gtgaagatta
6251 cgaaggccag ggcacaatcc aacgactttg ccagcctaga tgccgctgtc
6301 actcgaggtc gcatcactgg aacaacaacc gctgaggctg ttgtcactct
6351 cccaccacca taactacgtc tacataaccg acgcctaccc cagtttcata
6401 gtattttctg gtttgattgt atgaataata taaat