Sequence of DPV Dahlia mosaic virus
Dahlia mosaic virus isolate D10 polyprotein gene, complete cds.
ACC No: EU096522
Dated: 2008-03-26 | Length: 2439 | CRC: 1397027044
ID EU096522; SV 1; linear; genomic DNA; STD; VRL; 2439 BP.
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AC EU096522;
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DT 15-DEC-2007 (Rel. 94, Created)
DT 26-MAR-2008 (Rel. 95, Last updated, Version 2)
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DE Dahlia mosaic virus isolate D10 polyprotein gene, complete cds.
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KW .
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OS Dahlia mosaic virus
OC Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus.
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RN [1]
RP 1-2439
RA Pahalawatta V., Druffel K.L., Wyatt S.D., Eastwell K.C., Pappu H.R.;
RT "Genome structure and organization of a member of a novel and distinct
RT species of the genus Caulimovirus associated with dahlia mosaic";
RL Arch. Virol. 153(4):733-738(2008).
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RN [2]
RP 1-2439
RA Pahalawatta V., Druffel K.B., Wyatt S.D., Pappu H.R.;
RT ;
RL Submitted (13-AUG-2007) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, Washington State University, P.O. Box 646430, Pullman, WA
RL 99164, USA
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FH Key Location/Qualifiers
FH
FT source 1. .2439
FT /organism="Dahlia mosaic virus"
FT /isolate="D10"
FT /mol_type="genomic DNA"
FT /country="USA"
FT /db_xref="taxon:213888"
FT CDS 1. .2439
FT /codon_start=1
FT /product="polyprotein"
FT /note="truncated coat protein and reverse transcriptase;
FT ORFIV and ORFV"
FT /db_xref="UniProtKB/TrEMBL:A9UD03"
FT /protein_id="ABW80581.1"
FT /translation="MSSILDRLDKIFFDLLEIRPIEQIKELVQLMSLTEQECEQQFSEK
FT KDLRNKYLSDKYFSEEKFLENKEKVFKINKPIIKEENSLKEKHYANECPNRQQSLKKVK
FT LISEVETKGYYPTENIFNDYMQVYSLKEQESLTNSDSCSDSSSSQKFNLRETIDNDEQV
FT HCCQSELVYSNITNPNSIYIKGKIFLKGYKTITLHCYVDTGASLCLASKHVIPEDLWEN
FT TPKDIKVTIANQETIKLDKVCRNLIVYFSGEPFPIPTIYQQESGIDLLLGNNFCQLYGP
FT FTQWIDRISFHLNQEMILIKKITKAFQIGKTGFLESMKKDSKTKQIPGTNITQEVIKPE
FT RFFLEIQRYQKIEDLLEKVCFENPIDPEKSKYWMNASIELIDPKTVVRVKPMKYSPQDR
FT EEFGKQIKELLDLKLIIPSKSPHMSPAFLVENEAEKRRGKKRRVVNYKAINAATKGDSH
FT NLPCMQELLTLLRGKTIFSTFDCKSGFWQVLLNEESQLLTAFTCPDGHYQWRVVPFGLK
FT QAPSIFQRHMQNALRGLENYCTVYVDDIIVFSDSEEKHYFHVLSALKTIEKYGIILSKK
FT KANLFKTKINFLGLEIDQGTHCPQKHILENLHKFPDTLEDKKHLQRFLGVLTYAESYIP
FT KLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKKNLTSFPKLYLPKEKEFLIIETDASN
FT DFWGGVLKAKTADKEEVCRYTSGSFKTAERNYHSNEKELLAVKNTISKFSIYLTPVKFL
FT VRTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGSKNVLADCLPRDFQN
FT "
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SQ Sequence 2439 BP; 956 A; 395 C; 388 G; 700 T; 0 other;
eu096522 Length: 2439 26-MAR-2008 Type: N Check: 2012 ..
1 atgagttcta tcttagacag attagacaaa atcttttttg atctcttgga
51 aatccgtcca attgaacaaa taaaagaact cgttcaactc atgtccttaa
101 cagaacaaga gtgcgaacaa caattttctg aaaaaaaaga tttgagaaat
151 aaatatcttt ccgataaata tttttctgaa gaaaaatttt tagaaaataa
201 agaaaaggtt tttaaaataa acaaacctat aattaaagaa gaaaactctt
251 taaaagaaaa acactatgcc aacgaatgtc ctaacagaca acagtctctg
301 aaaaaggtaa aattaatttc tgaggtagaa acgaaaggat attatcctac
351 agaaaatatt tttaatgatt atatgcaggt atattcatta aaagaacagg
401 aatctttgac taattctgat agttgttcag acagttcttc ttcccaaaaa
451 tttaatttga gggaaacaat agataatgat gaacaagttc attgttgtca
501 aagcgaatta gtttattcaa atataactaa tccaaactcg atttatatca
551 aagggaaaat atttcttaaa ggatataaaa caataactct acattgctat
601 gtagatacag gagcaagcct ttgtcttgca agtaaacacg ttattcctga
651 ggatctatgg gaaaacactc ccaaagatat aaaagtaaca attgcaaatc
701 aggaaacaat aaaattagac aaggtttgta gaaatcttat tgtctatttt
751 tcaggggaac catttcctat tcccactatc taccaacaag aaagtggtat
801 agatttactc cttggaaata acttttgtca attatatggg ccattcaccc
851 aatggattga cagaatatct tttcatctta atcaagaaat gattttgatc
901 aaaaagataa caaaagcttt tcaaattgga aaaactggtt ttcttgaatc
951 catgaaaaaa gattcaaaaa ctaaacaaat tccgggtacc aatataaccc
1001 aagaagttat aaaaccggaa agattttttc ttgaaataca gagatatcaa
1051 aaaattgaag atctacttga aaaagtatgt tttgaaaacc ctattgaccc
1101 agaaaagtcc aaatactgga tgaatgcctc aatagaatta atagatccca
1151 aaaccgtggt tagggtaaaa cccatgaaat atagtccaca ggatcgcgaa
1201 gaatttggta agcaaatcaa agaattactt gatttaaaat taattattcc
1251 aagtaaatct cctcacatgt ctccagcttt tcttgtagaa aacgaagcag
1301 aaaaaaggag aggaaaaaag cgcagggttg taaattataa ggcaattaat
1351 gcagctacca aaggagacag ccataatctt ccttgtatgc aggaattatt
1401 aaccctctta agaggaaaaa ccattttttc tactttcgac tgcaagagtg
1451 gtttttggca ggtattgcta aatgaagaat ctcagttatt aactgcgttc
1501 acatgtccag acggtcatta ccaatggagg gtagtccctt ttggattaaa
1551 acaggcacca agcatatttc aacgacatat gcaaaatgcc ctaagaggat
1601 tagaaaatta ttgtaccgtc tacgttgacg atatcattgt tttctcagac
1651 tctgaagaaa agcattattt tcatgtttta tcagctttaa aaacgattga
1701 aaaatatgga attattctat caaaaaagaa agcaaatctt tttaaaacaa
1751 agataaactt tttaggtctt gaaatagacc aagggactca ttgtccacaa
1801 aaacatatct tggaaaattt acataaattt ccagatactt tagaagataa
1851 aaaacatctt caaagatttt taggtgttct aacctatgca gaaagctaca
1901 ttcccaagct tgcggagctc aggaaaccct tacaggtaaa actaaaaaag
1951 gattacgtat gggaatggaa acaatccgat acgaactata ttaaaaagat
2001 aaagaaaaat ctaacgagtt ttccaaaact ttatcttcca aaagaaaaag
2051 aatttcttat tatagaaaca gatgcttcca acgatttttg gggaggcgtt
2101 ctaaaggcaa aaactgctga caaagaagaa gtatgccgat acacttctgg
2151 tagttttaaa acagccgaaa ggaattacca cagtaatgaa aaagaattac
2201 ttgcggtaaa aaacactatt tccaaattct ccatttatct tactccggta
2251 aaattcttgg ttagaacgga taatagaaac ttcacttatt tcctcaaaac
2301 aaaaatttca ggagataaca aacaaggtcg tcttgtcaga tggcaaatgt
2351 ggttctccag atactctttt gatattgagc atcttgaagg atcaaaaaat
2401 gtgttggctg actgcctacc acgcgacttt caaaattaa