Sequence of DPV Dandenong virus
Dandenong virus isolate 0710-2678 segment L Z protein (Z) and RNA-dependent RNA polymerase (L) genes, complete cds.
ACC No: EU136039
Dated: 2008-03-05 | Length: 7215 | CRC: 2111963623
ID EU136039; SV 1; linear; genomic RNA; STD; VRL; 7215 BP.
XX
AC EU136039;
XX
DT 05-MAR-2008 (Rel. 95, Created)
DT 05-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE Dandenong virus isolate 0710-2678 segment L Z protein (Z) and RNA-dependent
DE RNA polymerase (L) genes, complete cds.
XX
KW .
XX
OS Dandenong virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses; unclassified Old world arenaviruses.
XX
RN [1]
RP 1-7215
RA Palacios G., Druce J., Du L., Tran T., Birch C., Briese T., Conlan S.,
RA Quan P.-L., Hui J., Marshall J., Fredrik Simons J., Egholm M.,
RA Paddock C.D., Shieh W.-J., Goldsmith C.S., Zaki S.R., Catton M.,
RA Lipkin W.I.;
RT "A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases";
RL N. Engl. J. Med. 358(10):991-998(2008).
XX
RN [2]
RP 1-7215
RA Palacios G.F., Druce J., Lei D., Tran T., Birch C., Briese T., Conlan S.,
RA Quan P.-L., Hui J., Marshall J., Fredrik Simons J., Egholm M., Ierino F.,
RA Shieh W.-J., Goldsmith C., Zaki S., Catton M., Lipkin W.I.;
RT ;
RL Submitted (04-SEP-2007) to the EMBL/GenBank/DDBJ databases.
RL Center for Infection and Immunity, Department of Epidemiology, Mailman
RL School of Public Health, Columbia University, 722 W 168th Street, Floor 18,
RL New York, NY 10032, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .7215
FT /organism="Dandenong virus"
FT /segment="L"
FT /isolate="0710-2678"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:483046"
FT gene 84. .356
FT /gene="Z"
FT CDS 84. .356
FT /codon_start=1
FT /gene="Z"
FT /product="Z protein"
FT /protein_id="ABY20731.1"
FT /translation="MGQAKSKETKLSKKEDRAEVLPDATYLGPLNCKSCWQRFDSLVRC
FT HDHYLCRQCLNLLLTVSDRCPLCKHPLPTKLRVSTAPSSPPPYEE"
FT gene complement(586. .7215)
FT /gene="L"
FT CDS complement(586. .7215)
FT /codon_start=1
FT /gene="L"
FT /product="RNA-dependent RNA polymerase"
FT /protein_id="ABY20732.1"
FT /translation="MRKDISELRSLCLNYIEQDERLSRQKLSFLGQREPKLVLIEGLKL
FT LSRCIEMDSADKSGCTHNFEDKSVEAILIESGIVCPGLPLIIPDGYKLIDNSLVLLECF
FT VRSTPASFERKFIEDTNKLASIKEDLALAGITLVPIVDGRCSYDNSFMPDWVNFKFRDL
FT LFRLLEYSSQNEQVLEESEYFRLCESLKTTVDKRSGMDSMKVLKDARSTHNELIMKMCH
FT DGVNPTMSCDEVAIGINSLFSRFRRDLEGGKLTRNFRMVDPETLIEEFSCLYENITEVD
FT DIRGLSREAIESCPLMRFITGDTEGHKRCQTSSTIYERLLSMLNKVKSLKLLNTRRRQL
FT LKLDVLCLSSLIKQCDSEALTNEKHWVGVCYSSVNDRLVSYCSTREEFLRVLRNRKRSK
FT SNRGTPLEELFKTSIQDFILKVKKCLSAVGLSFAHYGLSEDLISECQITLNDFEEFKRH
FT GTHPVMHYTRFEDYTFQTDERQLTDIRSLKKLSSVCLALTNSMKTSSVARLRQNQLGSI
FT RYQVVECKEVFFQVAKVGNEEYHLLYQKTGECSRCYSLQGPTGHLISFYADPKRYFLPI
FT FSDEVLFGMVAVMISWIRSCPDLVDQIHDIEVALRTLVLLLLTNPTKRNQKQVQNVRYL
FT VMALVSDFSSVSLMDKLKEDLITHAEKVVYKLLRFLLRKVFLTGGKVMLSAKFKFMLNV
FT SYLCHLITKETPDRLTDQIKCFEKFFEPKTQFGFFVNPKEVISPQEEEAFFEQMKKFVS
FT KDADCQRVVPGINLEAFSLMVSSFNNGTLIHKGEKKLNNLDPMTNSGCATALDLASNKS
FT VVVNKHLNGERLLEYDFNKLLVSAVSQITEGFVRKTKYKLSHTDYEYKVSKLVSRLVLN
FT IEKGHSGDKEVSMDNTYFEGEEETLFFKEMEDKVKSTISHYGKGTTIGQLRDLKGEKGA
FT KGLHHLQMVLTGKSSHLRKIILSEISFHLVEDFDPACLSPNDMKFICEAVEGSAELSSL
FT YFTHTVKEQCGLDEMAMNLCRKFFSEGDWFSCLKMILLQMNANAYSGKYRHVQRQGLNF
FT KFDWDRLEEDVRISERESNSESLSKALSLTKCMSAALKNLCFYSEESPTSYTSVGPDSG
FT RLKFALSYKEQVGGNRELYIGDLRTKMFTRLVEDYFESFSSFFSGSCLNNEKEFENAIL
FT SMTINVREGLLNYSMDHSKWGPMMCPFLFLMLLQNLRLGDDQYVKSGKDHVSTLLTWHM
FT HKLVEVPFPVVNALMKSYIKAKLKLLKGTQTTATEEIFKNYFDSGVVPSHISSLIDMGQ
FT GILHNASDFYGLVSERFINYCIGVIFGERPDAYTSSDDQITLFDKKLSELVDKDPEEVL
FT ILLEFHSHLSGLLNKFISPKSVVGRFAAEFKSRFYVWGEEVPLLTKFVSAALHNVKCKE
FT PHQLCETIDTIADQAVANGVPILLVNCIQKRTLDLLKYANFPLDPFLLNVDTDVKDWLD
FT GSRGYRIQRLIENLCPEETKVMRKLIRRLHHKLKNGEFNEEFFLDLFNREKEDAILQLA
FT EILNIEDDLSDLANINWLNLNEMFPMRMVLRQKVVYPSVMNFQEEKVPSLIKTLQNKLC
FT SKFTRGAQKLLSEAINKSAFQSCISSGFIGLCKTLGSRCVRDKSKENLYIKRILEDLSR
FT DNHVSRIQRGDDINLYICDKRAHPEPNLCHISLLRPLLWDYICVSLSNSFELGVWVLAE
FT PIKAREAVKSVPNQLNACDYVARKPESSRLLEDKINLNHVLQSVRRLYPQIFEEQLLPF
FT MSDQSSKNMRWSPRIKFLDLCVLIDINSESLSLISHIVKWKRDEHYTVLFSDLVNSHQR
FT TDSSLTDEFVVSTRDVCKNFLKQVYFESFVREFVVTSRTLGNFSWFPHRDMMPSEDGAE
FT AMGPLQSFVLKVVNKDVERPMYKTDLQFGYGWFSYRLGDTVCNAALLIKQGMVNPRVFE
FT TLGDIWDYILKQTKGLLEFTLTVDFVHNQNNTEHLRRFSLMFTVKCRLLDPGIAEFLSC
FT TYMFKGEVDRRLLDECLNLLRTDPVFKIKDGTFDIRSDEFEDYMIDPLVLGDSIELELL
FT KSNNILADVKSFDFSRVGPEWEPVPLTIRCGAFYEGRNFVQNIVVNLETKDLRVMLAEL
FT EGYERIDEVLCNLLSHRFRTGEHLVNSEINAIIQELHITKSILLSPLRGVPDWFTFRDC
FT RLCYSRSKDTIMFETVGGKFRLKGRSCDDWLGEPAVQDID"
XX
SQ Sequence 7215 BP; 2035 A; 1761 C; 1304 G; 2115 T; 0 other;
eu136039 Length: 7215 05-MAR-2008 Type: N Check: 9994 ..
1 cgcaccgagg atcctaggcg tttatttgcg cttttgtgtg gacaactttc
51 atttaaaagt caatctttgg atactgcgtc atcatgggtc aagcaaaatc
101 caaagaaaca aagctctcca agaaagagga cagagcagag gttctacctg
151 acgcaaccta tcttggtcct ctgaactgca aatcatgctg gcaaaggttc
201 gacagtttgg ttaggtgcca tgaccactac ctatgcaggc aatgtctgaa
251 ccttttgttg acagtctcag acagatgccc tctctgcaaa caccctctac
301 cgaccaagct gagggtgtcg acagccccca gctcacctcc cccctacgag
351 gagtgagcaa ctgaaggacc cgcccaaccc caccaaccct ccacacgccc
401 aacccacagg cacagcagcc gcacagacac acaaacagag acacacacac
451 acacacccaa gcaccacaag ccccgccgcg ggccacgaag cacaacacac
501 acccacaccc caacccccac cagggggggc cccccggggg gaccccccgg
551 gggggagaga gagagggcgc actcgcgggc gccgctcagt ctatgtcctg
601 caccgcgggt tcccccagcc agtcatcgca ggatcttccc ttgagcctga
651 acttcccacc taccgtttca aacatgatgg tatcttttga cctgctgtag
701 cagagcctac agtctctgaa ggtaaaccaa tctggcacac cccttaatgg
751 tgagagtaaa atggactttg tgatgtgcaa ctcctgtata atagcattta
801 tctccgaatt caccaagtgc tcacctgttc taaatctgtg cgaaagaagg
851 ttgcaaagca cctcatcaat tctctcataa ccctccagtt cagccagcat
901 taccctgagg tccttagtct ctagattgac cacaatgttt tgaacaaagt
951 tcctcccctc ataaaaggca ccacacctaa tagtcagagg cacaggctcc
1001 cactcaggtc caactctgct gaagtcaaaa gatttaacat cagccaagat
1051 gttattggac ttcaacaatt ccagttcaat agagtcacca agcacaagtg
1101 ggtcaatcat ataatcctca aattcatcag atcgaatatc aaaggtgcca
1151 tcttttattt tgaagacagg atctgttctc aacagattga ggcattcatc
1201 tagcaatctt ctgtccacct cacccttgaa catataagtg cacgacagaa
1251 actcagcaat tcctggatca agcaatctgc atttcactgt gaacatcagt
1301 gagaatctcc ttaagtgttc tgtgttgttt tggttgtgca caaaatcaac
1351 agtcaatgtg aattctaaaa gaccctttgt ttgtttgaga atgtaatccc
1401 atatgtctcc caatgtctca aatacccttg ggtttaccat gccttgcttt
1451 atcagcaaag ctgcattgca gactgtgtcc cccagacgat aagaaaacca
1501 tccataccca aattgtaaat cggttttgta cataggtctt tcaacatcct
1551 tattcaccac cttcagcaca aatgactgaa ggggccccat ggcctccgcc
1601 ccgtcttcgg agggcatcat gtctcggtga ggaaaccatg aaaagtttcc
1651 caatgttcgg gatgtcacca caaattcccg aacaaatgac tcaaagtaca
1701 cttgttttaa gaagttttta cacacatccc ttgtgctaac tacaaattca
1751 tcagttaaac ttgaatcagt acgctggtgc gagttgacaa ggtctgaaaa
1801 gagaactgtg tagtgctcat ccctcttcca ctttactatg tgtgaaatga
1851 gtgacagcga ctcagaattt atatcgatca acacacataa atcgaggaac
1901 tttatacgag gactccatct catattctta gagctttgat ctgacatgaa
1951 tggcaaaagt tgttcctcaa aaatctgagg atacagtctc ctgacagatt
2001 gcaagacatg gtttaagttg attttgtcct ccaaaagtct tgagctctca
2051 ggtttcctag caacgtagtc acaagcatta agctggtttg gtactgattt
2101 tacagcttct cttgctttaa tgggctctgc cagcacccac acacctagtt
2151 cgaatgaatt actcaaagaa acacaaatgt aatcccagag gagaggcctc
2201 aagaggctta tatgacagag gttaggctct gggtgtgcac gcttgtcgca
2251 tatgtacaga tttatgtcat cacctctttg gattcttgac acatggttgt
2301 ctcgtgatag atcctccaag attcttttta tataaagatt ctccttactt
2351 ttatccctga cacatctgct ccctagagtc ttgcaaagac ctataaagcc
2401 tgaagaaatg cagctctgga aagctgactt gtttatagct tctgaaagca
2451 gcttctgtgc ccctctagtg aatttcgaac ataacttatt ctgaagggtt
2501 tttatcaatg agggtacctt ttcctcttga aagttcatta ctgatgggta
2551 gaccaccttt tgtcttaaca ccattctcat ggggaacatt tcattaaggt
2601 ttaaccagtt tatgtttgca agatcactta aatcatcctc tatgttgaga
2651 atttctgcaa gctgaagaat ggcatcctct ttctctctgt tgaagaggtc
2701 tagaaagaat tcctcattaa actctccatt ttttaacttg tgatgcagtc
2751 ttcttattag cttcctcatc acctttgttt cttctgggca caaattctca
2801 atcaaccttt gaatcctata acctctggaa ccatctagcc agtccttcac
2851 atctgtgtcc acatttaata agaaaggatc caatgggaaa tttgcatact
2901 tcaagaggtc caatgttctt ttctgaatgc agttgaccaa caaaatagga
2951 acaccattag caacagcttg atctgcaatt gtatcaatgg tctcacacaa
3001 ctgatgaggt tccttgcact tcacattatg tagagctgct gacacaaatt
3051 tagtaaggag gggcacttct tctccccaga cataaaaccg cgacttaaac
3101 tcagctgcaa acctgccgac aacacttttt gggctgatga acttattcag
3151 aagcccactt aagtgggagt gaaattccaa taaaatgagg acttcttctg
3201 gatctttatc aactaattca cttagttttt tgtcaaaaag agtgatttgg
3251 tcatcacttg atgtgtaagc atctggtctc tcaccaaaga tgacaccgat
3301 gcagtagtta ataaatctct cgctgaccaa gccataaaag tcagaagcat
3351 tgtgtaaaat tccttgaccc atatcaatga ggctagaaat atgtgagggc
3401 acaactcctg aatcaaaata attcttaaag atctcttctg ttgctgttgt
3451 ctgtgttccc tttaaaagtt tcaatttggc cttaatgtaa gacttcatta
3501 gtgcattaac aacaggaaat gggacctcca caagtttgtg catgtgccag
3551 gtcaatagag tgcttacatg gtctttgccg gacttgacat actgatcatc
3601 acccaaacgg agattctgta agagcattag gaataaaaat gggcacatca
3651 ttggacccca cttactatgg tccatactat agtttagaag cccttctctc
3701 acatttattg tcatggataa aattgcattt tcaaactctt tctcattatt
3751 tagacaagaa cctgagaaga agcttgagaa agattcaaag taatcttcga
3801 caagccttgt gaacatcttt gttcttaaat caccaatgta tagttctctg
3851 tttcccccaa cttgttcttt gtaggataat gcgaatttta gcctcccaga
3901 atcagggccc acagaggtgt acgatgttgg cgactcctct gagtaaaaac
3951 agaggttctt taaggcagcg ctcatacact ttgttaatga cagggcctta
4001 ctcagtgact cagaattact ctctctttca ctaatcctca catcctcctc
4051 aagcctatcc caatcaaact tgaagttcaa accctgtctc tgcacatgcc
4101 tatatttacc tgagtatgca ttagcattca tctgcagtag tatcattttc
4151 aaacatgaga accaatcccc ctctgaaaaa aacttcctgc aaagattcat
4201 tgccatttca tccaggccgc actgttcttt aacagtgtgg gtaaagtaca
4251 atgaagagag ctctgcactc ccttcaacag cttcacagat gaatttcata
4301 tcattgggcg aaaggcaggc cgggtcaaag tcctccacca gatgaaatga
4351 aatctctgat agtataatct tcctcaagtg agatgacttc cctgtcaaga
4401 ccatttgcaa atgatgcaag cctttggccc ctttttcccc ttttagatct
4451 cttagttgtc caatagttgt tccctttcca taatgggata ttgttgactt
4501 caccttatct tccatctcct taaagaaaag tgtttcctct tcaccctcaa
4551 aataagtgtt gtccatacta acttccttat ccccactatg tcctttctca
4601 atgttaagaa ctaacctgga cactaactta gacaccttat actcataatc
4651 agtgtggctc aacttatatt tagttttcct aacaaaccct tcggtgatct
4701 ggctaacagc actaacaagc aacttgttga aatcatactc aagaaggcgt
4751 tccccattta ggtgcttgtt gacaacaaca ctcttgttac ttgccaagtc
4801 cagtgctgta gcgcaaccag aatttgtcat tgggtccaag ttattgagtt
4851 tcttctctcc tttatgaatc agtgtgccat tgttgaatga ggagaccata
4901 agactgaaag cctccaagtt tatacctgga accactcttt gacagtctgc
4951 atccttactg acaaattttt tcatttgttc aaaaaaggct tcttcttcct
5001 gaggggagat cacctctttg ggattgacaa agaagccaaa ttgggttttt
5051 ggttcaaaga acttctcaaa acattttatc tgatcagtca gtctgtcagg
5101 tgtctccttt gttattaaat gacacaaata tgaaacattt agcataaatt
5151 tgaactttgc actgagcatc actttccccc ctgtgagaaa aaccttcctt
5201 aataggaatc tcaataactt gtaaaccacc ttctcagcat gagttatcaa
5251 atcctccttt aatttgtcca ttaatgatac agaagagaaa tctgagacca
5301 gggccattac taagtacctc acattttgaa cttgcttttg atttcttttg
5351 gtaggatttg tcagcaacaa cagaaccagt gtccttaaag cgacttcaat
5401 gtcatggatc tgatcaacaa ggtcaggaca tgatctgatc caggaaatca
5451 tcacggcaac cataccaaac aagacctcat cggagaatat tggtaggaag
5501 tatctctttg gatctgcata aaaagaaatt agatgacctg ttggcccctg
5551 caaagagtag cacctcgagc attcccctgt cttttgatat aatagatgat
5601 actcttcatt accaaccttg gccacctgaa agaaaacctc tttacactct
5651 accacctggt acctgattga gcccaactga ttctgcctca atctggccac
5701 tgagctagtc ttcatactgt tggttaatgc caaacagaca gatgaaagtt
5751 tctttaaact ccttatgtct gttagttgcc tttcatctgt ttgaaaagtg
5801 taatcctcaa atcttgtgta gtgcatcact gggtgagtcc catgtctctt
5851 gaattcctca aaatcattga gtgtgatctg acattcagat atcaaatctt
5901 cagacaaccc atagtgcgca aagctaaggc ccactgcaga gaggcatttt
5951 ttaactttta ggataaagtc ttgtatagaa gttttaaaca attcttctaa
6001 gggtgtaccc ctgtttgatt tagacctttt cctatttctt aaaaccctta
6051 agaactcctc ccttgtgcta cagtaactta ctagtctgtc attcacactg
6101 ctataacaaa ctcccaccca gtgtttttca tttgtgagag cctcagagtc
6151 acactgcttg atgagagatg aaaggcagag aacatccagt ttaagtagct
6201 gtctccttct agtgttcaaa agtttcaagc tcttcacctt gttcagcatt
6251 gaaagcaacc tttcatagat agtgctactt gtttgacatc ttttatgtcc
6301 ttcagtatcc cctgtgataa atctcattaa tgggcaagac tcaattgctt
6351 ccctgctcaa accacgaata tcatcgactt ctgttatgtt ctcataaaga
6401 caggagaact cttcaatcag tgtttcgggg tctaccatcc tgaagttcct
6451 tgtcaatttt cctccctcca ggtctcttct aaacctacta aagagggagt
6501 tgatgcctat agccacctca tcacaactca tggtgggatt cacgccatca
6551 tgacacattt tcatgatcag ctcattgtgg gttgaccttg cgtccttcaa
6601 caccttcatt gaatccatgc cggatcgttt atcaacagtg gtttttaggg
6651 actcacaaag cctgaagtat tctgattcct caagaacctg ctcattttga
6701 ctggaatact caagtagtct gaataaaagg tctctaaatt taaagttgac
6751 ccaatctggc atgaaactat tgtcatagga gcagcggcca tccactatag
6801 ggaccagagt tatacctgca agtgcaaggt cctcctttat acttgccaat
6851 ttgttggtat cctcaatgaa cttcctctca aaactcgctg gtgtgctccg
6901 tacaaaacac tcaaggagta caagagaatt gtctatcaat ttatacccat
6951 ctgggatgat taaaggtaag ccgggacaca caatccccga ctctatgaga
7001 atagcctcca cagacttgtc ctcgaagtta tgtgtgcatc cgcttttgtc
7051 tgcgctgtcc atctctatac accttgagag caatttgagc ccttcaatca
7101 gcactagttt gggctccctc tgtcctagga agctcaactt ttgtcttgat
7151 agtcgctcat cttgctcaat atagttcaga caaaggcttc ttaattctga
7201 aatgtctttc ctcat