Sequence of DPV Southern cowpea mosaic virus

Southern cowpea mosaic virus coat protein gene, complete cds.

ACC No: EU170481

Dated: 2007-11-01 | Length: 979 | CRC: 1074987173

                
ID   EU170481; SV 1; linear; genomic RNA; STD; VRL; 979 BP.
XX
AC   EU170481;
XX
DT   01-NOV-2007 (Rel. 93, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Southern cowpea mosaic virus coat protein gene, complete cds.
XX
KW   .
XX
OS   Southern cowpea mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-979
RA   Chen H., Chen Q., Liao F., Zhao W., Lin S., Zhu S.;
RT   "Detection and identification of southern cowpea mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-979
RA   Chen H., Chen Q., Liao F., Zhao W., Lin S., Zhu S.;
RT   ;
RL   Submitted (25-SEP-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Quarantine, Xiamen Entry-Exit Inspection and Quarantine, No.31,
RL   Dong-du Jin-ding Road, Xiamen 361012, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .979
FT                   /organism="Southern cowpea mosaic virus"
FT                   /specific_host="Vigna unguiculata (southern cowpea)"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="infected leaf"
FT                   /db_xref="taxon:196398"
FT   CDS             1. .840
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABW34399.1"
FT                   /translation="MSGLFHHRTKPREIRAFVMATRLTKKQLAQAIQNTLPNPPRRKRR
FT                   AKRRAAQVPKPTQAGVSMAPIAQGTMVKLRPPMLRSSMDVTILSHCELSTELAVTDAIV
FT                   VTSELVMPFTVGTWLRGVAQNWSKYAWVAIRYTYLPSCPTTTSGAIHMGFQYDMADTLP
FT                   VSVNQLSNLKGYVTGPVWEGQSGLCFVNNTKCSDTSRAITIALDTNEVSEKRYPFKTAT
FT                   DYTTAVGVNANIGNILVPARLVIAMEGGSSKTAVNTGRLYASYTIRLIEPIAAALNL"
FT   3'UTR           841. .979
XX
SQ   Sequence 979 BP; 225 A; 252 C; 260 G; 242 T; 0 other;

eu170481 Length: 979  01-NOV-2007  Type: N  Check: 6110  ..

       1  atgtccggtc tattccatca ccggacaaaa ccgcgcgaga taagagcatt
      51  tgtaatggct acccgcttga ccaagaagca attagcacaa gctattcaga
     101  atactcttcc gaatccgcct cggcggaagc gacgcgcgaa gcggcgtgct
     151  gcgcaggtgc ccaagcctac ccaggctggg gtatccatgg cccctattgc
     201  tcaggggacc atggtgaagc ttaggcctcc catgctgcgc tcgtcgatgg
     251  acgtgaccat cttgtcacac tgtgagcttt ctactgagct cgctgtcact
     301  gacgcgatag ttgttacgtc tgagctagtc atgccgttca ctgtgggaac
     351  ttggcttcgt ggtgtagcac agaactggtc gaagtacgct tgggttgcga
     401  ttaggtacac ttacctaccg tcttgtccca ctactacgtc cggcgccatt
     451  catatggggt tccagtacga tatggctgat acccttcccg tgagtgtcaa
     501  tcagctgagt aacttgaaag ggtatgttac tggtcctgtg tgggagggtc
     551  agtctggcct ttgttttgtt aacaatacaa agtgctcgga cacctcccga
     601  gctattacta tagccctgga tactaacgaa gtctctgaaa agaggtaccc
     651  cttcaagacc gcgactgact ataccaccgc tgtcggagtg aatgccaaca
     701  ttggcaacat tcttgtgccc gctaggttgg tgatagcgat ggaaggagga
     751  tcttctaaga ctgctgtgaa cactgggagg ctttacgcct catacaccat
     801  acggctgatc gagcccatag cggcggcatt aaacttgtag cgaagtataa
     851  aacgctttac ccctggtggt tggtcgccca gggacggact ctgcacaata
     901  gactatggtt tggaaatctt ggaccatcta gttatgctag gaacgatttc
     951  ccgctggaaa cggagcgcta tccgaatgg