Sequence of DPV Sweet potato virus 2

Sweet potato virus Y isolate Hua3 polyprotein gene, partial cds.

ACC No: EU218529

Dated: 2008-06-01 | Length: 1857 | CRC: -1657331566

                
ID   EU218529; SV 1; linear; genomic RNA; STD; VRL; 1857 BP.
XX
AC   EU218529;
XX
DT   01-JUN-2008 (Rel. 96, Created)
DT   01-JUN-2008 (Rel. 96, Last updated, Version 1)
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DE   Sweet potato virus Y isolate Hua3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sweet potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-1857
RA   Untiveros M., Fuentes S., Kreuze J.;
RT   "Molecular variability of sweet potato infecting potyviruses in Peru with
RT   emphasis on Sweet potato feathery mottle virus";
RL   Unpublished.
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RN   [2]
RP   1-1857
RA   Untiveros M., Fuentes S., Kreuze J.;
RT   ;
RL   Submitted (13-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Crop Improvement and Genetic Resources, International Potato Center, La
RL   Molina Av, 1895, Lima 12, Peru
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1857
FT                   /organism="Sweet potato virus Y"
FT                   /specific_host="sweet potato"
FT                   /isolate="Hua3"
FT                   /mol_type="genomic RNA"
FT                   /country="Peru:Huaral"
FT                   /virion
FT                   /db_xref="taxon:225962"
FT   CDS             <1. .1644
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ABY64745.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAMTYSLCKLNIKPENHERVCIYFANG
FT                   DDLLLAINPTYEWILDSLGKLFRELGLNYDFSSRTNDKEELWFMSHRGMKRDGIYIPKL
FT                   EPERIVSILEWDRANEPVHRLEAICAAMVEAWGYDDLLQHIRKFYAWILDQAPYSELAR
FT                   VGKAPYIAETALKALYTCVEPSAEDLSEYVRVLNLMYDDAIESSDCEPVYHQSGAGEVK
FT                   DAGTPTPAKSVRMKPGQTQPLKAPEGSTDPVDPPPPTVEEIVEEETPAQKALREARGKQ
FT                   PATQPSYTYGRDTGPRSPRQMTTTSGVRDRDVNAGTVGTFTVPRLQITSSKKRLPIVDG
FT                   RPVINLDHLAVYDPEQTNLANTRSTQEQFKAWYDSVKGDYGVSDDEMGILLSGLMVWCI
FT                   ENGTSPNINGMWVMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDIAEAYIEKRNRIKA
FT                   YMPRYGLQGNLTDMSLARYAFDFYELHSNTPVRAREAHMQMKAAALKNAKNRLFGLDGN
FT                   VSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
FT   mat_peptide     <1. .645
FT                   /product="nuclear inclusion body protein"
FT                   /note="RNA_dep_RNAP; RNA-dependent RNA polymerase; RdRp"
FT   mat_peptide     646. .1641
FT                   /product="coat protein"
FT   3'UTR           1645. .1857
XX
SQ   Sequence 1857 BP; 600 A; 346 C; 445 G; 466 T; 0 other;

eu218529 Length: 1857  01-JUN-2008  Type: N  Check: 1764  ..

       1  ggtaacaaca gtgggcaacc ttctacagtg gtggacaaca cacttatggt
      51  tgttttggct atgacttatt cattgtgtaa acttaatatt aaaccagaaa
     101  accatgaacg agtgtgtatt tattttgcaa atggtgatga cctgctacta
     151  gccataaatc ctacgtatga atggattctt gattcactcg gaaaattgtt
     201  cagggagctt gggcttaatt acgatttttc atcaagaaca aatgacaaag
     251  aagagctgtg gttcatgtct cacagaggaa tgaaaagaga tggtatttac
     301  ataccaaaac tagaacctga gagaattgtg tcaatactag agtgggacag
     351  agcaaatgaa ccagtgcata gattggaagc tatttgtgct gcgatggtcg
     401  aagcatgggg atatgatgat ttgttacaac atatccgcaa attctatgca
     451  tggattcttg atcaagcacc atatagcgaa cttgctcgag taggcaaagc
     501  gccatatata gcagagacag cactgaaggc tctatacaca tgtgttgaac
     551  catcagctga agatttgtcc gagtatgtcc gtgttttaaa cttgatgtat
     601  gatgacgcta ttgaatcaag tgattgtgaa ccagtctatc atcagtcagg
     651  cgctggagag gtgaaagatg ctggaacacc aacaccagca aaatcagtta
     701  ggatgaaacc tgggcaaaca caaccactga aagcaccaga aggaagcaca
     751  gatccagttg atcctccgcc cccaactgtt gaagagattg tggaggaaga
     801  gacaccagca caaaaagcat taagggaggc tcgtggcaaa caaccagcta
     851  cacaaccatc atacacctat gggagggata caggaccccg gagtccaagg
     901  caaatgacca caacaagtgg agttagggat agagacgtta atgccggtac
     951  agtaggaact ttcactgttc caaggctgca gattacatca agcaagaaga
    1001  gattgccaat agttgatggt cgtccagtaa tcaatctgga tcacttggca
    1051  gtgtatgatc cagagcaaac aaatcttgca aataccaggt caacgcagga
    1101  gcaatttaag gcatggtatg acagtgtgaa aggagactat ggagtatctg
    1151  atgacgaaat gggaatactt ttgagtggtc tcatggtgtg gtgtatcgaa
    1201  aatggtacat caccaaacat aaatggaatg tgggtgatga tggacggtga
    1251  tgaacaagtg acatatccaa taaaacctct attggatcac gctgtcccca
    1301  catttagaca gataatgaca cactttagcg acatcgctga agcgtatatt
    1351  gagaagagaa acaggataaa ggcctacatg ccaaggtatg gcctacaggg
    1401  gaatttgact gatatgagtc ttgcgcggta tgcatttgat ttctatgaac
    1451  tccactcgaa cacgccagtt agagcgagag aagcacatat gcagatgaaa
    1501  gcagcagctt taaagaatgc aaagaaccgc ctgtttggtt tggatggaaa
    1551  cgtctccacg caagaagaag atacggagag gcatacaaca actgatgtta
    1601  caagaaatat acataatctg ttaggaatga gaggtgtgca gtaaacaata
    1651  tattgctcgt acttttaact tcagttggtc tttaatttaa attcgtgtct
    1701  ttcagtcccg gagagcgttg gttgtccata tcagctaaat gtggttttac
    1751  cactgctggt gtgaatgaga agacctctct ctattacgta tcataaggga
    1801  ctcttaaaag tgagtctttg actcgtaaga aaagcctttt tggttcgtga
    1851  tcgagcc