Sequence of DPV Tomato yellow leaf curl virus

Tomato yellow leaf curl virus strain Sinaloa REP-associated protein (C1) gene, partial cds; movement protein (V2) gene, complete cds; and coat protein (V1) gene, partial cds.

ACC No: EU224315

Dated: 2008-05-30 | Length: 771 | CRC: -125784460

                
ID   EU224315; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
XX
AC   EU224315;
XX
DT   30-MAY-2008 (Rel. 96, Created)
DT   30-MAY-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus strain Sinaloa REP-associated protein (C1)
DE   gene, partial cds; movement protein (V2) gene, complete cds; and coat
DE   protein (V1) gene, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-771
RA   Gamez-Jimenez C., Alvarez-Ruiz P., Santos-Cervantes M.E., Leyva-Lopez N.E.,
RA   Mendez-Lozano J.;
RT   "First report of Tomato yellow leaf curl virus infecting potato crops in
RT   Sinaloa, Mexico";
RL   Unpublished.
XX
RN   [2]
RP   1-771
RA   Gamez-Jimenez C., Alvarez-Ruiz P., Santos-Cervantes M.E., Leyva-Lopez N.E.,
RA   Mendez-Lozano J.;
RT   ;
RL   Submitted (05-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Agropecuario, CIIDIR-IPN U. Sinaloa, Blvd. Juan de Dios Batiz Paredes No.
RL   250, Guasave, Sinaloa 81101, Mexico
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /specific_host="potato"
FT                   /strain="Sinaloa"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /db_xref="taxon:10832"
FT   gene            complement(<1. .59)
FT                   /gene="C1"
FT   CDS             complement(<1. .59)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="REP-associated protein"
FT                   /protein_id="ABY61015.1"
FT                   /translation="MPRLFKIYAKNYFLTYPNCS"
FT   gene            373. .723
FT                   /gene="V2"
FT   CDS             373. .723
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="movement protein"
FT                   /protein_id="ABY61016.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV
FT                   PEAQNIQNVSKP"
FT   gene            533. .>771
FT                   /gene="V1"
FT   CDS             533. .>771
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /protein_id="ABY61017.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSDP"
XX
SQ   Sequence 771 BP; 214 A; 166 C; 164 G; 227 T; 0 other;

eu224315 Length: 771  30-MAY-2008  Type: N  Check: 4435  ..

       1  gaacaattgg gatatgttag gaaataattt ttggcatata ttttaaataa
      51  acgaggcatg ttgaaatgaa ttggtgtccc tcaaagctct atggcaatcg
     101  gtgtatcggt gtcttactta tacctggaca ccaaatggct atttggtaat
     151  tttgtaaaag tacattgcaa ttcaaaattc aaaattcaaa aatcaaatca
     201  ttaaagcggc catccgtata atattaccgg atggccgcgc cttttctttt
     251  tatgtggtcc ccacgagggt tccacatacg tcactgtcaa ccaatcaaat
     301  tgcatcctca aacgttagat aagtgttcat ttgtctttat atacttggtc
     351  cccaagtagt ttgtcttgca ctatgtggga tccacttcta aatgaatttc
     401  ctgaatctgt tcacggattt cgttgtatgt tagctattaa atatttgcag
     451  tccgttgagg aaacttacga gcccaataca ttgggccacg atttaattag
     501  ggatcttata tctgttgtaa gggcccgtga ctatgtcgaa gcgaccaggc
     551  gatataatca tttccacgcc cgtctcgaag gttcgccgaa ggctgaactt
     601  cgacagccca tacagcagcc gtgctgctgt ccccattgtc caaggcacaa
     651  acaagcgacg atcatggacg tacaggccca tgtaccggaa gcccagaata
     701  tacagaatgt atcgaagccc tgatgttcct cgtggttgtg aagggccatg
     751  taaggttcaa tcggatccgt g