Sequence of DPV Banana bunchy top virus

Banana bunchy top virus strain TW3 segment DNA-S, complete sequence.

ACC No: EU366171

Dated: 2010-09-14 | Length: 1045 | CRC: 1204606195

                
ID   EU366171; SV 1; linear; genomic DNA; STD; VRL; 1045 BP.
XX
AC   EU366171;
XX
DT   05-FEB-2008 (Rel. 94, Created)
DT   14-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Banana bunchy top virus strain TW3 segment DNA-S, complete sequence.
XX
KW   .
XX
OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
XX
RN   [1]
RP   1-1045
RX   PUBMED; 19522579.
RA   Fu H.C., Hu J.M., Hung T.H., Su H.J., Yeh H.H.;
RT   "Unusual events involved in Banana bunchy top virus strain evolution";
RL   Phytopathology 99(7):812-822(2009).
XX
RN   [2]
RP   1-1045
RA   Liu Y.T., Fu H.C., Yeh H.H.;
RT   ;
RL   Submitted (26-DEC-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology and Microbiology, National Taiwan University, 1 Sec. 4,
RL   Roosevelt Road, Taipei 106, Taiwan
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1045
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA-S"
FT                   /strain="TW3"
FT                   /mol_type="genomic DNA"
FT                   /country="Taiwan"
FT                   /db_xref="taxon:12585"
FT   stem_loop       1. .60
FT   CDS             242. .754
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B0LRE1"
FT                   /db_xref="InterPro:IPR006753"
FT                   /db_xref="UniProtKB/TrEMBL:B0LRE1"
FT                   /protein_id="ABY84647.1"
FT                   /translation="MARFPKKSIKKRRVGRRKYGSKAATSHDYSSLGSILVPENTVKVF
FT                   RIEPTDKTLPRYFIWKMFMLLVCKVKPGRILHWAMIKSSWEINQPTTCLEAPGLFIKPE
FT                   HSHLVKLVCSGELEAGFATGTSDVECLLRKTTVLRKNVTEVDYLYLAFYCSAGVSINYQ
FT                   NRITYHV"
XX
SQ   Sequence 1045 BP; 336 A; 176 C; 257 G; 276 T; 0 other;

eu366171 Length: 1045  14-SEP-2010  Type: N  Check: 6942  ..

       1  atgtcccgat gacgtaagcg ctggggacta ttattacccc cagcgctcgg
      51  gacgggacat gggctaatgg atgatggatt tagggcccaa cgggcccgtt
     101  atgatgggtt ttgggcttct ggctaaatcc agaagaccaa aaacaggcgg
     151  gaaccgtcct aatttcaaac ttagattgct tgccctgcaa gccatctaga
     201  agtctatata taccagtgtc gatatattgt ctagatatca aatggcgagg
     251  tttccgaaga aatcgatcaa gaagaggcgg gttggcagga ggaagtatgg
     301  aagcaaggcg gcaacaagcc acgactactc gtcgttagga tcaatattgg
     351  ttcctgaaaa taccgtcaag gtatttagga ttgagcctac tgataaaaca
     401  ttacccagat attttatctg gaaaatgttt atgctgttgg tgtgcaaggt
     451  gaagcccgga agaatacttc actgggctat gattaaaagt tcttgggaaa
     501  tcaaccagcc gactacatgt ctggaagcac caggtttatt tataaaacct
     551  gaacatagcc atctggttaa actggtatgc agtggggaac ttgaagctgg
     601  attcgcaaca gggacatcag atgttgaatg tcttctaagg aagacaaccg
     651  tgttgaggaa gaatgtaaca gaggtggatt acttgtattt ggcattttat
     701  tgtagtgctg gagttagtat taactaccag aacagaatta catatcatgt
     751  atgatatgtt tagtaaacat aacctatgaa tggaataatg tccaaataac
     801  atacaacacg ctatgacaaa agggaaaaat gaaggatcgg gggttgattg
     851  gtctatcgta tcgcttaagg gccgcaggcc cgttgaaatg attctttatt
     901  caacaaatat acatgatacg gatagttgaa tatataaaca actatgtata
     951  aatacaacag aatgttgtaa ataattaata taatgagaag gaaggtatat
    1001  ttgtgacgga taaggatgag aaccaccact ttagtggtgg gccag