Sequence of DPV Cucumber mosaic virus
Cucumber mosaic virus isolate CMV-ND2 segment RNA2 2a protein (2a) and 2b protein (2b) genes, complete cds.
ACC No: EU414799
Dated: 2012-01-02 | Length: 2856 | CRC: -1513918372
ID EU414799; SV 1; linear; genomic RNA; STD; VRL; 2856 BP.
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AC EU414799;
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DT 02-JAN-2012 (Rel. 111, Created)
DT 02-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE Cucumber mosaic virus isolate CMV-ND2 segment RNA2 2a protein (2a) and 2b
DE protein (2b) genes, complete cds.
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KW .
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OS Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
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RN [1]
RP 1-2856
RA Liu Y., Gao R., Li X.;
RT ;
RL Submitted (17-JAN-2008) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .2856
FT /organism="Cucumber mosaic virus"
FT /segment="RNA2"
FT /host="Petunia hybrida"
FT /isolate="CMV-ND2"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:12305"
FT 5'UTR <1. .66
FT gene 67. .2643
FT /gene="2a"
FT CDS 67. .2643
FT /codon_start=1
FT /gene="2a"
FT /product="2a protein"
FT /protein_id="ACB56618.1"
FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR
FT PLPAVDVSESVTEDAHSLRTPDGAPSEEVSVEFVTYGAEDYLEKSDDELLIAFETMVKP
FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYDDEC
FT EADDIQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER
FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVANPPSLNRATDRVDIN
FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN
FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN
FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP
FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGSDVKNKHCLEID
FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT
FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA
FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD
FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQAYKELYYSDRRQC
FT ELINSFSCVELRIERSSSTKQRKKKDGIERRRSDKRRTPAGSYGGGEEAETKVSQAEST
FT GTRSQKSQREGAFKSQTVPLPTILSGRWFGTDRDAPPCEHGGIVRV"
FT gene 2402. .2737
FT /gene="2b"
FT CDS 2402. .2737
FT /codon_start=1
FT /gene="2b"
FT /product="2b protein"
FT /protein_id="ACB56619.1"
FT /translation="MELNVGAVTNVELQLARMVEAKRQRRRSHKQNRRERGHKSPSERA
FT RSNLRLFRFLPFYQVDGSELIEMHHHANMVGLSESEAPCFTLPAEEDHDFDDTDWFAGN
FT EWAEGSF"
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SQ Sequence 2856 BP; 711 A; 639 C; 675 G; 831 T; 0 other;
eu414799 Length: 2856 02-JAN-2012 Type: N Check: 9112 ..
1 gagcgtacgg ttcaatccct gcctcccctg taaaactccc tagactttct
51 agtttctttc tttcctatgg ctttccctgc ccccgctttc tcactagcca
101 atcttttgaa cggtagttac ggtgtcgaca ctcccgagga agtggaacgc
151 gtgcgatctg agcaacgcga agaggctgct gcggcctgtc gtaattacag
201 gcccttaccc gctgtggatg tcagcgagag tgtcacagag gatgcgcatt
251 ccctccgaac tccagacgga gctccctctg aagaggtgtc tgtagagttt
301 gttacctatg gtgctgaaga ttaccttgaa aaatctgatg atgagctcct
351 tatcgctttt gagacgatgg tcaaacccat gcgtatcgga caactgtggt
401 gccctgcgtt taataaatgt tcttttattt ccagcattgc tatggccaga
451 gctttgctgt tagcacccag aacatcccac cgaaccatga agtgttttga
501 ggacctggtc gcggctattt acactaaatc cgatttctac tacgatgatg
551 agtgtgaagc cgacgacatt cagatagata tctcgtctcg cgatgtaccc
601 ggttattctt tcgaaccgtg gtcccgaacg tctggatttg aaccaccgcc
651 tatctgcgag gcgtgtgaca tgatcatgta ccagtgcccg tgttttgatt
701 ttaatgcttt aaagaaatcg tgcgctgaga ggacattcgc tgatgattat
751 gttatcgaag gtttagatgg tgttgttgac aatgcgactc tgttgtcgaa
801 tttaggtcca tttttggtgc ctgtgaagtg tcaatatgag aaatgtccaa
851 cacccaccgt tgcgaatcct ccgagtctta atcgtgctac tgatcgtgtt
901 gatatcaatt tagttcaatc catttgtgac tcgactctgc ccacgcatag
951 taactacgac gactcttttc atcaagtgtt tgtcgagagt gcagactatt
1001 ctattgatct ggatcatgtt agacttcgcc agtctgatct tatcgcaaaa
1051 attccagatt cagggcatat gataccggtt ttgaacaccg ggagtggtca
1101 caagagagta ggtacaacga aggaggtcct tacagctatc aagaaacgta
1151 atgctgatgt tccagagcta ggtgattccg ttaatctgtc cagactgagt
1201 aaggctgtgg ctgagagatt cttcatttca tacatcaatg gtaactctct
1251 agcatccagc aactttgtta atgtcgttag taacttccac gattacatgg
1301 aaaaatggaa gtcctcaggt ctttcgtatg atgatcttcc ggatcttcat
1351 gctgaaaatt tgcagtttta tgatcatatg ataaaatctg atgtgaaacc
1401 tgtagtgagc gacacactca acatcgacag accggttccg gctactataa
1451 cgtatcataa gaagggtata acctcccagt tctcaccgtt gtttactgcg
1501 ctatttgagc gtttccagag atgccttcga gaacgcatta ttcttcctgt
1551 tggaaagatt tcatcccttg agatggcagg atctgatgtt aagaacaagc
1601 actgtctcga gattgatctg tctaaatttg acaagtctca gggtgaattc
1651 catttaatga ttcaggaaca cattttgaat ggtctagggt gcccagctcc
1701 gataactaag tggtggtgtg atttccacag attctcttac attagagacc
1751 gtagagctgg cgttggtatg cccatcagtt tccagagacg aactggtgac
1801 gcatttacct attttggtaa caccattgtc accatggctg aattcgcatg
1851 gtgttacgac accgaccaat tcgaaaagct tttattctca ggcgatgatt
1901 ctctaggatt ttcagtactt ccccctgttg gtgatccgag taaattcacg
1951 actcttttca acatggaagc taaggtgatg gagcccgcag taccatatat
2001 ctgttcgaag ttcttactct ctgacgagtt cggtaacact ttttccgttc
2051 cagatccatt gcgcgaggtt cagcggttag gcacgaagaa aatcccctat
2101 tcagacaatg atgaattcct gtttgctcac ttcatgagtt ttgttgatcg
2151 attgaagttt ttggaccgaa tgactcagtc ttgtatcgat cagctctctc
2201 tcttctttga gttgaagtac aggaagtctg gggctgaggc tgctttaatg
2251 ttaggcgcct ttaagaaata taccgctaat tttcaagcct ataaagaact
2301 ctactattca gatcgtcgtc aatgcgaatt gatcaattcg tttagttgtg
2351 tagagttaag gattgagcgt tcgagttcca ctaagcagcg aaagaagaaa
2401 gatggaattg aacgtaggcg cagtgacaaa cgtcgaactc cagctggctc
2451 gtatggtgga ggcgaagagg cagagacgaa ggtctcacaa gcagaatcga
2501 cgggaacgag gtcacaaaag tcccagcgag agggcgcgtt caaatctcag
2551 actgttccgc ttcctaccat tctatcaggt agatggttcg gaactgatag
2601 agatgcacca ccatgcgaac atggtgggat tgtccgagtc tgaggcccct
2651 tgttttacgt taccagcgga agaagaccat gattttgacg atacggattg
2701 gttcgctggt aacgaatggg cggaagggtc gttctgaacc tccccttcct
2751 atctccctcc ggctttctga ggcgggagct gagttggcag tattgctaca
2801 aactgtctga agtcactaaa cgttttacgg tgaacgggtt gtccatccag
2851 ctaacg