Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus isolate Sikkim coat protein gene, complete cds.

ACC No: EU499362

Dated: 2010-07-09 | Length: 672 | CRC: -1107835869

                
ID   EU499362; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   EU499362;
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DT   11-MAR-2008 (Rel. 95, Created)
DT   09-JUL-2010 (Rel. 105, Last updated, Version 3)
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DE   Cymbidium mosaic virus isolate Sikkim coat protein gene, complete cds.
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KW   .
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OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
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RN   [1]
RP   1-672
RA   Rani P., Pant R.P., Jain R.K.;
RT   "Serological Detection of Cymbidium mosaic and Odontoglossum ringspot
RT   viruses in Orchids with Polyclonal Antibodies Produced Against Their
RT   Recombinant Coat Proteins";
RL   J. Phytopathol. 158(7-8):542-545(2010).
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RN   [2]
RP   1-672
RA   Pooja R., Pant R.P., Jain R.K.;
RT   ;
RL   Submitted (19-FEB-2008) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Indian Agricultural Research Institute, New Delhi, Delhi
RL   110012, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Cymbidium mosaic virus"
FT                   /isolate="Sikkim"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12178"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B1PWE0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:B1PWE0"
FT                   /protein_id="ACA58565.1"
FT                   /translation="MGEPTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFNFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT
FT                   E"
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SQ   Sequence 672 BP; 131 A; 241 C; 158 G; 142 T; 0 other;

eu499362 Length: 672  09-JUL-2010  Type: N  Check: 4651  ..

       1  atgggagagc ccactccaac tccagctgcc acttactccg ctgccgaccc
      51  cacttctgca cccaagttgg ccgacctggc tgccattaag tactcacctg
     101  tcacctcctc catcgctacc cccgaagaaa tcaaggccat aacccaattg
     151  tgggttaaca atcttggcct ccccgccgac acagtaggta ccgcggccat
     201  tgacctggct cgcgcttacg ctgacgtcgg ggcgtccaag agtgctaccc
     251  tgctcggctt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc
     301  gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta
     351  cgcaaaagtg gtgtggaatt tgatgctggc tactaacgat ccgcccgcca
     401  actgggccaa ggctggtttc caggaggata cccggtttgc cgcctttaac
     451  ttcttcgatg ccgtcgattc cactgccgcg ctggagcctg ctgaatggca
     501  gcgccgccct actgaccgtg aacgtgctgc gcactcgatc gggaagtacg
     551  gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt
     601  gccgaggtca ccaagggcca tcttggctcc accaacactc tctatgctct
     651  gcctgcaccc cctactgaat aa