Sequence of DPV Tomato leaf curl Hsinchu virus
Ramie mosaic virus segment DNA-A, complete sequence.
ACC No: EU596959
Dated: 2008-04-29 | Length: 2738 | CRC: 966898716
ID EU596959; SV 1; circular; genomic DNA; STD; VRL; 2738 BP.
XX
AC EU596959;
XX
DT 29-APR-2008 (Rel. 95, Created)
DT 29-APR-2008 (Rel. 95, Last updated, Version 1)
XX
DE Ramie mosaic virus segment DNA-A, complete sequence.
XX
KW .
XX
OS Ramie mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2738
RA Feng X.H., Guo A.P.;
RT "Identification of the Ramie mosaic virus";
RL Unpublished.
XX
RN [2]
RP 1-2738
RA Feng X.H.;
RT ;
RL Submitted (27-MAR-2008) to the EMBL/GenBank/DDBJ databases.
RL Chinese Academy of Tropical Agricultural Sciences, Biotechnological
RL Institute, Longhua District, Xueyuan Road, Haikou, Hainan 571101, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .2738
FT /organism="Ramie mosaic virus"
FT /segment="DNA-A"
FT /specific_host="ramie"
FT /mol_type="genomic DNA"
FT /country="China"
FT /virion
FT /db_xref="taxon:486809"
FT gene 132. .500
FT /gene="AV2"
FT CDS 132. .500
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2"
FT /protein_id="ACC77576.1"
FT /translation="MWDPLVNDFPDTVHALRCMLAIKYCQLVANTYDPDTVGYDLIRDL
FT ILVIRARNYVEASRRYSDFNSRLQRTPPAELRQPRDQPCRCPHCPRHKQKAGLDLQAHV
FT SQAQDVQDVQKPRCSTWL"
FT gene 292. .1065
FT /gene="AV1"
FT CDS 292. .1065
FT /codon_start=1
FT /gene="AV1"
FT /product="AV1"
FT /protein_id="ACC77577.1"
FT /translation="MSKRPADIVISTPASKERRRLNFDSPGISRAAAPTVLVTNRRRAW
FT TYRPMYRKPRMYRMFKSPDVPRGCEGPCKVQSFEARHDVAHTGKVICISDVTRGGGLTH
FT RTGKRFCVKSVYVLGKIWMDENIKVKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDNE
FT PSTATVKNDLRDRFQVIRRFTSTVTGGQYASKEQALVKKYMKVNAQVVYNHQEGGKYEN
FT HTENALLLYMACTHSSNPVYATLKIRIYFYDSVSN"
FT gene complement(1062. .1466)
FT /gene="AC3"
FT CDS complement(1062. .1466)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3"
FT /protein_id="ACC77578.1"
FT /translation="MDSRTGEPITATQAENGVYTWTVKNPLYFKIVRHDVNVFLTRKDI
FT ITLQIQFNHNLRKALGIHQCFLTCRIWTRLRPQTWRFLNVFRYQCIKYLNNLGIISINN
FT VVRAIRYVLYDVLDGTIDAELSHIIKFNLY"
FT gene complement(1207. .1641)
FT /gene="AC2"
FT CDS complement(1207. .1641)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2"
FT /protein_id="ACC77579.1"
FT /translation="MQLSKGGHYKMQNSSSSPKRSTQVPIKVQHKIAKKAIRRRRVDLP
FT CGCTYYFALECASHGFTHRGTHHCNSGREWRLYLDGQKSPIFQDRPPRRECIPDKEGHH
FT HTPDPVQPQPEESVGDSPVFSDLPDLDSFTSSDLAFLKCI"
FT gene complement(1520. .2599)
FT /gene="AC1"
FT CDS complement(1520. .2599)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1"
FT /protein_id="ACC77580.1"
FT /translation="MAPPRRFTINAKNYFLTYPQCPLSKEEALSQLLNLSTPTNKKFIK
FT ICRELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKKYM
FT EKDGDTAEWGEFQVDGRSARGGQQSANDAYAQAINTGSKLLALNVIKELAPKDYVLQFH
FT NLNANLDKIFAPPVEVFNCPFLSSSFDQVPEEIECWVADNIKDAAARPWRPISIVIEGE
FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEERNAALKRWALQNAKFFFLSEAL
FT YSSANQGPTQNSQEGYSQT"
FT gene complement(2245. .2448)
FT /gene="AC4"
FT CDS complement(2245. .2448)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4"
FT /protein_id="ACC77581.1"
FT /translation="MKMEALTSMFLFNSRENTNARITDSSTWYPQPGQHISIQTFRELS
FT PAPMSKNTWKKTATPPNGESFR"
XX
SQ Sequence 2738 BP; 710 A; 581 C; 643 G; 804 T; 0 other;
eu596959 Length: 2738 29-APR-2008 Type: N Check: 1934 ..
1 accggatggc cgcgattttt tttaggcggc cccaccacgc actcttgtcc
51 cccactcagg acgctccctc acaagtttat ttagtgcgtg gtccccttta
101 aatcacttgg gcgccaagtt gtaggcgcaa gatgtgggat cctttggtaa
151 atgatttccc agacaccgta cacgctctgc gttgtatgtt agctataaaa
201 tactgtcagc tggtagcaaa tacatacgat ccggatacgg tgggatacga
251 tctaatacgt gatttgatac ttgtcatacg tgcacgtaat tatgtcgaag
301 cgtcccgccg atatagtgat ttcaactccc gcctccaaag aacgccgccg
351 gctgaacttc gacagccccg ggatcagccg tgccgctgcc cccactgtcc
401 tcgtcacaaa cagaaggcgg gcttggactt acaggcccat gtatcgcaag
451 cccaggatgt acaggatgtt caaaagccca gatgttccac gtggctgtga
501 aggcccatgt aaggtccagt cgtttgaagc ccgtcatgat gtggcccata
551 ctggtaaggt tatttgtatt tcagatgtca ctcgtggtgg tgggctgacc
601 caccgaacag gcaagaggtt ctgcgtgaag tccgtttacg tattgggtaa
651 gatctggatg gatgagaata tcaaggttaa aaaccataca aatacagtca
701 tgttttttct tgttagagac aggaggccgt atggaactcc ccaggatttt
751 ggtcaggtgt tcaacatgta tgacaatgag cccagtacgg ccactgtgaa
801 gaacgatctt agagatcgtt ttcaagtgat acgtcgtttt acttcaacag
851 ttactggagg ccagtatgcg agcaaggaac aagcccttgt caagaaatat
901 atgaaggtta acgctcaggt ggtttataat caccaggagg gtgggaaata
951 cgagaatcat actgagaatg ctctattgtt gtatatggct tgtacacatt
1001 ctagtaatcc cgtgtatgca actttgaaaa tcaggatcta tttttatgat
1051 tctgtcagta attaataaag attgaatttt attatatgtg ataactcagc
1101 atcaattgtg ccgtcaagta catcgtacaa tacatatcta atggctctaa
1151 caacattgtt aatactaatg attcctaaat tatttaaata cttaatacat
1201 tgatatctaa atacatttaa gaaacgccag gtctgaggac gtaaacgagt
1251 ccagatccgg caggtcagaa aacactggtg aatccccaac gctttcctca
1301 ggttgtggtt gaactggatc tggagtgtga tgatgtcctt ccttgtcagg
1351 aatacattca cgtcgtggcg gacgatcttg aaatataggg gatttttgac
1401 cgtccaggta tagacgccat tctctgcctg agttgcagtg atgggttccc
1451 ctgtgcgtga atccatgcga agcgcattca agtgcaaagt aatatgtgca
1501 tccgcacgga aggtcaactc tacgtctgcg aatagccttc ttggctattt
1551 tgtgttggac cttgattggc acttgagtag agcgcttcgg agaggaagaa
1601 gaattttgca ttttgtaatg cccacctttt gagagctgca ttccgctcct
1651 cgtctaagta ttctttatag gacgaagttg ggcctggatt gcagaggaag
1701 atagtgggaa taccaccttt aatttgaatt ggtttcccgt atttggtgtt
1751 gctttgccag tccctttggg cccccatgaa ctctttaaag tgctttaagt
1801 agtgggggtc tacatcatca atcacgttgt accaggcatc attattgtac
1851 actcttggac tgaggtctaa gtgaccacat agataattat gtggccccaa
1901 cgacctggcc cacattgttt tgccagtacg actctcgccc tcgattacaa
1951 tgctaatggg tctccacggc cgcgcagcgg catctttgat gttatctgca
2001 acccagcact caatctcctc tgggacttga tcaaaggacg atgataagaa
2051 tggacaatta aatacctcta ctgggggtgc aaatatttta tctaaattgg
2101 catttaaatt atgaaactgt aaaacataat ctttaggagc gagctcctta
2151 attacattaa gagccagtaa tttgctacca gtgttaatcg cctgcgcgta
2201 agcgtcattg gctgattgct gaccccctct tgcagatctg ccgtctacct
2251 gaaactctcc ccattcggcg gtgtcgccgt ctttttccat gtattttttg
2301 acatcggagc tggacttagc tccctgaatg tttggatgga aatgtgttga
2351 cctggttggg gataccaggt cgaagaatct gttattctgg catttgtatt
2401 ttccctcgaa ttgaataaga acatggaggt gagggcttcc atcttcatga
2451 agctctctgc aaattttaat aaatttttta tttgttgggg ttgagaggtt
2501 taataattgg gaaagtgctt cctctttgga gagagggcac tgaggatatg
2551 tgagaaaata atttttagcg tttattgtga aacgcctggg aggagccatg
2601 ttgacttggt caatcgggga tcaaccatct atcccattca atcggggaat
2651 gggtctcaat atatacttga gaccctaatg gcataaatgt aattttggaa
2701 tgagttagaa attcaatcgc ggccatccgt ttaatatt