Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus from Ocimum sanctum capsid protein gene, complete cds.

ACC No: EU600216

Dated: 2008-04-08 | Length: 657 | CRC: -625582300

                
ID   EU600216; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   EU600216;
XX
DT   08-APR-2008 (Rel. 95, Created)
DT   08-APR-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Cucumber mosaic virus from Ocimum sanctum capsid protein gene, complete
DE   cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
XX
RN   [1]
RP   1-657
RA   Sharma R., Khan A.A., Afreen B., Ali S., Rafiq A., Naqvi Q.A.;
RT   ;
RL   Submitted (29-FEB-2008) to the EMBL/GenBank/DDBJ databases.
RL   Plant Virology, Aligarh Muslim University, Aligarh, UP 202002, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .657
FT                   /organism="Cucumber mosaic virus"
FT                   /specific_host="Ocimum sanctum"
FT                   /lab_host="Nicotiana tabacum cv. White Burley"
FT                   /isolate="AMU-Aligarh"
FT                   /serotype="II"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collected_by="Akil A. Khan"
FT                   /virion
FT                   /db_xref="taxon:12305"
FT   CDS             1. .657
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="involved in encapsidation, movement, and aphid
FT                   transmission of virus"
FT                   /protein_id="ACB58306.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLRLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQHAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 657 BP; 157 A; 164 C; 152 G; 184 T; 0 other;

eu600216 Length: 657  08-APR-2008  Type: N  Check: 7893  ..

       1  atggacaaat ctggatctcc caatgctagt agaacctccc ggcgtcgtcg
      51  cccgcgtaga ggttctcggt ccgcctctgg tgcggatgca gggttgcgtg
     101  ctttgactca gcagatgttg agactcaata aaaccctcgc cattggtcgt
     151  cccactctta accacccaac cttcgtgggt agtgaaagct gtaaacccgg
     201  ttacactttc acatctatta ccctgaaacc gcctgaaatt gaaaaaggtt
     251  catattttgg tagaaggttg tctttgccag attcagtcac ggactatgat
     301  aagaagcttg tttcgcgcat tcaaatcagg attaatcctt tgccgaaatt
     351  tgattctacc gtgtgggtta cagttcggaa agtaccttca tcatccgatc
     401  tttccgtcgc cgccatctct gctatgtttg gcgatggtaa ttcaccggtt
     451  ttggtttatc aacatgctgc gtccggagtt caggccaaca ataagttact
     501  ttatgacctg tccgagatgc gtgctgatat cggcgacatg cgtaagtacg
     551  ccgtcctggt ttactcgaaa gacgataaac tagagaagga cgagattgta
     601  cttcatgtcg acgtcgagca tcaacgaatt cctatctcac ggatgctccc
     651  gacttag