Sequence of DPV Flexal virus
Flexal virus strain BeAn 293022 segment L, complete sequence.
ACC No: EU627611
Dated: 2008-08-15 | Length: 7038 | CRC: -714160115
ID EU627611; SV 1; linear; genomic RNA; STD; VRL; 7038 BP.
XX
AC EU627611;
XX
DT 03-MAY-2008 (Rel. 95, Created)
DT 15-AUG-2008 (Rel. 96, Last updated, Version 2)
XX
DE Flexal virus strain BeAn 293022 segment L, complete sequence.
XX
KW .
XX
OS Flexal virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC New world arenaviruses.
XX
RN [1]
RP 1-7038
RX DOI; 10.1016/j.mib.2008.06.001.
RX PUBMED; 18602020.
RA Charrel R.N., de Lamballerie X., Emonet S.;
RT "Phylogeny of the genus Arenavirus";
RL Curr. Opin. Microbiol. 11(4):362-368(2008).
XX
RN [2]
RP 1-7038
RA Emonet S.F., de Lamballerie X.N., Charrel R.N.;
RT ;
RL Submitted (09-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL MIND, The Scripps Research Institute, 10550 North Torrey Pines Road, La
RL Jolla, CA 92037, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .7038
FT /organism="Flexal virus"
FT /segment="L"
FT /strain="BeAn 293022"
FT /mol_type="genomic RNA"
FT /country="Brazil"
FT /db_xref="taxon:45220"
FT CDS 51. .338
FT /codon_start=1
FT /product="Z protein"
FT /protein_id="ACC94297.1"
FT /translation="MGLRYSKAVRDRYGERETVGRVPMTLNLPQGLYGRFNCKSCWFAN
FT KGLIACSDHYLCLNCLTRMLSRSEFCEICNRPLPTKIIFEESPSAPPYEP"
FT CDS complement(382. .7008)
FT /codon_start=1
FT /product="L protein"
FT /note="polymerase"
FT /protein_id="ACC94298.1"
FT /translation="MDETLNEMRDLIRKWVPDEPEFIEQKASSLSQVHLRAVVIEGLKL
FT LSLLVEVDSCKKNRCIHNRSKTVNAILREYKMVAPTLPDLVPDGYLVTGDIVVLLEAFV
FT RVNQSSFEVKYNHDFGKLMMLSQDLSKVGITLVPVVDGRSNYYVDYIPDWVIERLRWLI
FT ITIMKQLKDDGEDIEEVEYERLVCSLSTMENQGLGLESLTQMRECGASYKQRLESVLSL
FT GVNGQLSVSDCKTAILKLFTEYQTLKEQGYLAESFKSTDRLELQEALRSHSLIEHGNLG
FT ASPHCELCQNHMIEVLTKLKGSKSSSNTKLVSQEVSEYFSLLSVCNKIKGQKILNTRRL
FT TFLSLDVIMFNKFLQIIKKDCTQDVHFLVGGCLRSVNDRLVCPDLIVKAYERKMISSPK
FT WLTKVDQKLVHGLPEPLRQNYELQVQPLLTELDLETWAEYYDSYRENWGNKPSINYNAI
FT ATPCNCEENDRLDYVNLSDESFLQYLEALSTLSLGLVNSMKTASTTKLTVNQPDNYYGF
FT VHCNECYYQEFQEAYRSVLLYQKTGEKNRCYSIFKTVGGGDSEEHLASFYCDPKRFFLP
FT IMSSDVIHSMACEMLSWLDFMSDSDKRKVSCNLRKLLLCVMCTPTKRLQTYLQGMRYFI
FT MAYVNELHHVQLLNKLKIVAKSKAEFHTMCLTDDLILSVLTSSDEVNMTKAFKFILNVS
FT YLCHLITKETPDRLTDQIKCFEKFMEPKLNFDSVLINPSMSLHLEPKQEDKFLNDMTRL
FT LSKDVKGAQGSDPGTDPLLMSICSSLFNHGELGLPNKLSRDPQSPSFTSTALDLSSNKS
FT VVVPKLNELGEPITTYDYQTLVSSVVVELSESFKNKLQYKLDRKSLVYKIYDRLMGLVS
FT NKVKHPIDEPFDSEDDILDSVSDEVKDVILKIESDVTSCLSRMESSKCNHGCEKKVGTG
FT KADHNPLDSLWSEEVRMRVNIETSHHEVKDFDFNTFPPETYEELVQIVFESRFKELYFT
FT ERVFSPCPLEMLLRNLTRKYYEEQDFFECFKYILVSTGYDNRVGRYDHKKINRLGFKEP
FT ALNISEVVRISTRESNSESILKRLDKSFFTNSSLRNLCFYSDESATERSCVGTNIGRLK
FT FGLSYKEQVGGNRELYVGDLNTKLTTRLIEDYFESIVGDMRYSCLNNEKEFEKALLDMK
FT AIIRQSGFVVSMDHSKWGPHMSPVIFSQFLRLLKLSLLDGSVIDNRPILELLNWHIHKM
FT VEVPFNVVRAYMKGYIKRCTGVMEKNSMTMVEDFMHKQFETGVVPSHISSVIDMGQGIL
FT HNVSDFYGLVTEQFINYCIKLCYDTPCLSYTSSDDEILMSSSFILKKNDGELDVELAKD
FT ILDFHDFLSRGLNKFVSPKTVAGTFACEFKSRFFIWSQEVPLLTKFVAAALHNVKAKAP
FT NQLAETIDTILDQCVANGVSIEVVGRIAKRTNALLRYSGHPYNLFLCLEETDVKDWVDG
FT SRGYRLQRSVENVFPDDEVPGIVRAAARKVFHLIRSGTIEEEYLVSTIQTDPDDCLRRI
FT LEIADVTNEQIERILDFRWLNLRAHGDYRMVLRTKLMNSARIIEREEIPSLIKSVQSKL
FT SKNFVRGAKKIITDAVNKSAFQSCIASGFVGVCKSMGSKCVRDGKGSFLYIKDVLKDII
FT KHVNCHSCRNYCNIYCREALKEVSEYSRPLFWDYFALVLTNACELGNWVFSKAVLPKSV
FT YKLDNPSQFWLCKPSSHTELEDKVNLNHVLFSIKRNFPSLFEEHVAPYLSDLNTLKISW
FT VQRIKFLDICVAVDMTSESLGIISHMIKRKREELYVVKQNEQSMSHLREASTFEEGLQL
FT NSYEICYNFLLQILFESMLTPVLLTTSQLKKYFWYGEVELLPNTEPHELQQLTQFVMDC
FT KMLNISKAMTIDDLDLGFVQSTMKMTDVNLNLSTFLTKVDWANRYLYETFESMFIESPD
FT SEFSMELVLVFSHIRKSYKHKYEHTTTYTVKASFVLETSLFSDQDDQDVLVIPVKDVEC
FT FVSNSPGNHLQLDGAGLIPLVPVVSGKEVLNFDLLLKDQDVSFSGTSPHLSKVRLDFSA
FT HIKELKNKFSYKIIGPEMGFTPLHLDKGIIKEGDRIVSKLNVNVTSKSLFMALGLLSND
FT KVSEFLESLFYYLKSSGKTGALLSMTTSDLQNLVDNYNEDFKQILKRESDWVSFGAFKL
FT AYSNSLSAIMIQDERGPYRLKGLSCEKLLKSHDERVEID"
XX
SQ Sequence 7038 BP; 2079 A; 1575 C; 1226 G; 2158 T; 0 other;
eu627611 Length: 7038 15-AUG-2008 Type: N Check: 5810 ..
1 cgcaccgggg atcctaggct tttattggat ctgcgcactg tgtgatagcc
51 atggggttga gatactcaaa ggctgtcaga gacagatatg gagagaggga
101 aactgtcggc agagtgccca tgacactcaa ccttccccaa ggtctctatg
151 ggagatttaa ttgtaagtcc tgttggtttg ctaacaaagg tctgattgca
201 tgcagtgatc attatctgtg tctgaattgc ctaacaagga tgctcagcag
251 gtcagagttt tgcgagatct gcaataggcc tcttccaacc aagatcatct
301 ttgaagaaag tccatcagca ccaccctacg aaccctaggt ccacgggtgg
351 gccccgccgc gggccctggg gcccgctgtg cttagtctat ttccaccctc
401 tcatcgtgag acttcaacag tttctcacac gaaagacctt tcaaacggta
451 tggccctctt tcatcttgga tcattattgc tgacaaactg ttgctgtatg
501 ccaatttaaa tgcaccaaat gaaacccaat cggactccct ttttagaatt
551 tgcttgaagt cctcattgta attgtcaaca agattctgca gatctgatgt
601 tgtcatgctt agtaaagcac cagtctttcc tgaagatttc aaataataaa
651 atagcgattc aaggaactcg gaaactttat cattggatag caaaccaagt
701 gccataaaca aggacttact ggtgacattg acatttaact ttgaaacaat
751 cctatctcct tctttgataa tgcccttatc taaatgtagt ggagtaaaac
801 ccatctcagg cccgatgatc ttgtaagaaa atttattctt taattctttt
851 atatgtgctg agaagtctaa cctaactttg gatagatgtg gagaagtgcc
901 actgaaactc acgtcctgat cttttaatag caagtcaaaa ttgagaactt
951 cctttccaga tactacagga actagaggaa tcaatcccgc cccgtccagc
1001 tgtagatggt tcccaggtga gttggacaca aaacattcaa catcctttac
1051 tgggatgact aaaacatcct gatcatcttg atcagaaaat aaggacgtct
1101 caaggacaaa agatgcctta actgtgtagg tggttgtatg ttcatattta
1151 tgcttgtagc tctttctgat atgactaaaa actaagacaa gctccatact
1201 gaactcagag tctggggatt caatgaacat tgactcaaaa gtctcgtaaa
1251 gatatctatt agcccagtca accttggtta aaaatgtaga gagattcaaa
1301 ttcacatctg tcattttcat tgtcgactga acaaacccaa gatcaagatc
1351 atcaatggtc attgccttgc taatattaag cattttacag tccatcacaa
1401 attgtgtcaa ctgttgaagt tcatgaggtt ctgtgttagg cagtagctca
1451 acttctccgt accaaaagta tttcttcaac tgactggttg tcaataagac
1501 gggtgttaac atagattcaa aaaggatttg caacaagaaa ttgtaacaga
1551 tttcatatga gtttaactgc aaaccttcct cgaaagttga tgcttctctt
1601 aaatgtgaca ttgactgctc attctgcttg acgacataca gctcctctct
1651 tttcctttta atcatgtggg agataatgcc aaggctctca cttgtcatgt
1701 caaccgctac acaaatgtcc agaaatttta tcctctgaac ccatgatatc
1751 tttaaagtgt taagatcaga taaatatggc gctacatgct cctcaaacag
1801 agaagggaaa ttccttttta ttgaaaaaag cacatggtta aggtttacct
1851 tatcttcaag ctctgtatgt gatgatggct tacacaacca aaattgactt
1901 gggttgtcta acttataaac tgacttaggc aaaactgcct ttgaaaaaac
1951 ccagtttccc aactcacaag cattagttaa aaccagtgca aaataatccc
2001 agaataatgg tctggagtac tcactcactt cttttaaagc ctccctacaa
2051 tagatgttgc aataatttct acaagagtgg cagtttacat gtttaattat
2101 gtctttcaaa acatccttta tatagaggaa actccctttc ccgtctctaa
2151 cacacttact acccatgctt ttgcaaacac caacaaatcc agatgctatg
2201 caactctgaa atgcagactt gttgactgca tctgtgatta tcttctttgc
2251 acctctcaca aaattcttcg acaattttga ttgaacagat ttaattaatg
2301 agggtatttc ttccctttca ataatccgtg cagaattcat caatttcgtc
2351 ctcaatacca ttctatagtc accatgtgct cttaaattca accatctgaa
2401 gtctaagatt ctttctatct gttcattagt aacatcagca atttcaagta
2451 tacgccttaa acagtcatca gggtcagtct gtatagtact caccaggtat
2501 tcttcctcta ttgttcctga tctaattaaa tggaacactt ttctcgctgc
2551 agctctcact atcccaggga cttcatcatc tggaaataca ttttcaactg
2601 atctctgcaa tcggtagcct ctagaaccat caacccagtc tttaacgtca
2651 gtctcttcca aacataagaa taagttgtaa ggatgtcctg aataacgcaa
2701 aagagcatta gtcctcttag caatcctacc aacaacttca attgaaacac
2751 cattggccac acactgatcc aaaattgtgt caattgtctc agcaagttga
2801 tttggtgcct tggccttaac attatgcagt gcagcggcaa caaattttgt
2851 caagagtggg acctcttgtg accaaataaa aaagcgagac ttaaactcac
2901 atgcaaatgt cccagccact gtcttaggac tcacaaactt gtttagtcct
2951 cttgaaagaa agtcatgaaa gtctagaatg tcctttgcca attcaacatc
3001 caattcaccg tcattcttct ttaatatgaa ggatgaactc attaaaatct
3051 catcatcact ggaggtgtaa gataaacatg gggtgtcata gcaaagcttt
3101 atgcagtaat ttataaactg ttctgtgacc aaaccataga agtcagacac
3151 attatgcaaa attccttgcc ccatatcaat cacagaactt atgtgtgagg
3201 gcacaacccc agtctcaaac tgcttgtgca tgaagtcctc aaccatagtc
3251 attgagttct tctccataac tccagtgcac cttttgatgt accccttcat
3301 gtaggcacga actacattaa aaggcacctc caccattttg tgaatgtgcc
3351 aatttaacaa ctcaagaatt ggtctattgt ctattactga accatccaac
3401 aatgatagtt tcaacagtct caaaaattgg gaaaatatga caggagacat
3451 gtgaggaccc cactttgagt gatccatact aacaacaaaa ccggactgcc
3501 ttataatggc cttcatgtct aaaagtgcct tttcaaactc tttctcattg
3551 ttcagacaag aatacctcat gtcacccaca attgactcaa agtaatcctc
3601 aatgagtcta gttgtaagct tggtgttgag gtctccaaca tacagttctc
3651 tatttccacc tacttgctct ttgtatgaca atccaaactt caatctccct
3701 atgtttgtgc caacacaaga cctttcagtt gctgattcat ctgaataaaa
3751 acaaagattt cttaaggaag aatttgtgaa gaaactttta tctaatcttt
3801 tcagaattga ctcagaattg ctttccctcg tgctaattct aaccacttct
3851 gaaatattga gcgcaggttc cttaaaccct aagcgattaa tcttcttgtg
3901 atcatacctc ccaactctgt tgtcataacc tgtagaaacc aagatgtatt
3951 tgaaacattc aaagaagtcc tgttcttcat agtacttccg tgttaaattt
4001 cgcaacaaca tctcaagggg gcaaggacta aacactcttt cagtaaaata
4051 taattctttg aatctgctct caaaaacaat ctgaaccaat tcttcataag
4101 tctcaggtgg aaaggtgttg aagtcaaagt ctttaacttc atggtgactg
4151 gtttcaatgt tcacccgcat cctcacttcc tcagaccaga gggaatcaag
4201 gggattgtgg tcagctttac ctgtcccaac cttcttttca catccatgat
4251 tacatttgga agattccatc cttgaaagac aggaagttac atcagattct
4301 attttcaaga ttacatcttt cacctcatct gagacagagt ctaaaatatc
4351 atcctcagag tcgaagggct catctattgg atgtttgact ttgtttgaaa
4401 cgagccccat cagtctatca taaatcttgt agacaagtga ttttctatct
4451 agcttatatt gcagtttatt tttaaatgat tctgacaact caacaacaac
4501 tgatgagact aatgtttgat agtcataggt tgtaattggc tctcctaact
4551 cattgagctt tggaactaca acactcttat tgctgcttaa gtctagagcc
4601 gtgcttgtaa atgagggtga ctgtgggtct ctactcaatt tatttgggag
4651 cccaagctca ccatgattaa aaagcgacga acaaatgctc attaacaatg
4701 ggtcagtccc agggtctgaa ccctgtgctc ccttcacatc cttagataac
4751 aatcttgtca tgtcgtttag gaacttatcc tcctgcttag gttcaagatg
4801 gagggacata cttgggttaa ttaagactga gtcaaagttt agcttaggct
4851 ccatgaactt ctcaaaacac ttgatctgat cagtgagcct gtctggtgtt
4901 tccttggtga ttaagtgaca taggtaggaa acatttagta tgaatttgaa
4951 agccttagtc atgttgacct catcagatga tgtcaaaaca gaaagtatca
5001 aatcatcagt taagcacata gtgtgaaact ctgccttgga ttttgctaca
5051 attttcagtt tatttaggag ctgcacgtgg tgcaattcat tcacgtaagc
5101 cataatgaag tatctcatcc cttggaggta tgtttgcaac cttttagtag
5151 gagtacacat gacacaaagc agaagtttcc tcagattgca ggaaaccttt
5201 cttttgtcgg aatcactcat aaaatcaagc catgatagca tttcacatgc
5251 catactgtgg atcacatcag aactcattat gggtaagaaa aacctttttg
5301 gatcacaata gaaggatgcc aaatgctctt cactatcacc tcctccaaca
5351 gtcttgaata tggagtagca cctattcttt tcacctgttt tctgatacaa
5401 taatactgac ctatatgcct cctgaaactc ttggtaatag cactcattgc
5451 aatgtacaaa cccgtagtaa ttgtctggct gattaacagt cagttttgtt
5501 gtactagctg tcttcataga attgaccaac cccaatgata atgtggacaa
5551 ggcctctaga tactgaagga aagactcatc agagaggttc acatagtcaa
5601 gtctatcatt ctcctcacaa ttacaaggtg tagctatagc attataattt
5651 attgatggtt tgttacccca gttctccctg taactgtcat agtactcagc
5701 ccatgtttcc aggtccaact ctgttaaaag gggttgtact tgaagttcat
5751 aattttgtct tagtggttca ggtagtccat gaaccagttt ctgatcaact
5801 ttagtgagcc atttgggaga actgatcatt tttctctcat atgctttaac
5851 aattagatcc ggacacacca gtctatcatt aaccgaacgc agacatccac
5901 caacaaggaa atgaacatcc tgtgtacagt ctttctttat gatttgtaaa
5951 aacttgttga acataatgac atctagactg aggaaagtca gtctccttgt
6001 gttcaaaatt ttctgtccct tgatcttatt acatactgat agcaatgaaa
6051 agtactcaga gacctcctga ctcactagct ttgtgtttga ggatgacttg
6101 gagcccttca atttagtcag gacctcaatc atatgattct gacatagttc
6151 acaatgaggt gaagcaccaa ggttaccatg ctctattaag gagtgagatc
6201 tcaatgcctc ttgcagttct agtctatccg tagatttgaa gctctctgca
6251 aggtaccctt gctccttcaa tgtctgatat tcagtaaata gttttagaat
6301 agctgtctta caatcactaa cagacagttg accatttaca cccaaggaca
6351 ggactgattc caacctttgt ttgtatgatg caccacattc cctcatttgt
6401 gtcaggcttt caaggcccaa cccctgattc tccattgtgg ataaactaca
6451 caccaacctc tcatactcta cctcctcaat gtcttcacca tcatccttaa
6501 gctgcttcat tattgtaatg atgagccatc tcaacctctc tatcacccaa
6551 tctgggatat aatcaacgta gtaattggat ctaccatcaa ccacaggtac
6601 tagtgtaata cccacttttg acagatcttg actcaacatc atcaatttcc
6651 caaagtcatg attatactta acctcaaagc ttgattggtt tactctaaca
6701 aacgcctcta agagtaccac gatgtcccct gtgacaagat aaccatccgg
6751 cactaggtcg ggtagtgtcg gtgcaaccat cttgtactcc cttaatatgg
6801 cgttaactgt cttagatctg ttgtggatgc acctattttt cttgcaagaa
6851 tctacttcta caagtaaaga tagcaatttt agaccttcaa tcaccacagc
6901 tcttaggtgc acctgagata gtgaactagc cttctgttct atgaattcag
6951 gctcatcagg gacccatttt ctgatgaggt ccctcatttc gttcaaggtt
7001 tcatccatga tctagaaaag cctaggatcc ccggtgcg