Sequence of DPV Latino virus
Latino virus strain MARU 10924 segment L, complete sequence.
ACC No: EU627612
Dated: 2008-08-15 | Length: 7174 | CRC: -801407429
ID EU627612; SV 1; linear; genomic RNA; STD; VRL; 7174 BP.
XX
AC EU627612;
XX
DT 03-MAY-2008 (Rel. 95, Created)
DT 15-AUG-2008 (Rel. 96, Last updated, Version 2)
XX
DE Latino virus strain MARU 10924 segment L, complete sequence.
XX
KW .
XX
OS Latino virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC New world arenaviruses.
XX
RN [1]
RP 1-7174
RX PUBMED; 18602020.
RA Charrel R.N., de Lamballerie X., Emonet S.;
RT "Phylogeny of the genus Arenavirus";
RL Curr. Opin. Microbiol. 11(4):362-368(2008).
XX
RN [2]
RP 1-7174
RA Emonet S.F., de Lamballerie X.N., Charrel R.N.;
RT ;
RL Submitted (09-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL MIND, The Scripps Research Institute, 10550 North Torrey Pines Road, La
RL Jolla, CA 92037, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .7174
FT /organism="Latino virus"
FT /segment="L"
FT /strain="MARU 10924"
FT /mol_type="genomic RNA"
FT /country="Bolivia"
FT /db_xref="taxon:45221"
FT CDS 68. .343
FT /codon_start=1
FT /product="Z protein"
FT /db_xref="InterPro:IPR003224"
FT /db_xref="UniProtKB/TrEMBL:A9JR44"
FT /protein_id="ACC94299.1"
FT /translation="MGSKQSAPPKPLQLPQPRVSLLREAKPSLYGRYNCKCCWFQDKNL
FT VECSDHYLCLKCISSMLKRGKNCEICGKAIPTYIEVGITPTAPQLN"
FT CDS complement(428. .7144)
FT /codon_start=1
FT /product="L protein"
FT /note="polymerase"
FT /db_xref="UniProtKB/TrEMBL:B2MW49"
FT /protein_id="ACC94300.1"
FT /translation="MDDIVNQLFDLLRKHFPARPKVTEQITLVTCQNDAKMILTEGFKL
FT LSLLVELDSAEANNCTHNSDSLTIEGILRKEGIMSIALPRIVPDGFSLYGNVLILLETF
FT VRVNPVSFEQKYNQDMSKLLSLKDDLSLCGITLVPLVDGRTNYYNRFVDDWVIERFRWL
FT LLQLIKFVRESGEEIEELEYQRLITSLSKLENQSLGFENIEKLPQTGLKYRDELKKHMF
FT GNLSSKMKESEIQENLINVLKEFFIKEYKNNKSLHKFVFTNRDGLLAKLDQITHHSEHP
FT VDCMSCSSKLYSIIDKLGTLKRQPLHSDYHPIYAKMWHSDSLSQAEQIYLKLLSQCNKI
FT KSAKLLNTRRNTLLFLDLIMVNFIVHSWKQNPEVLTEYRRCGLMAGQLALFSNDRYFDL
FT NELRNKLINKLKNCENWIAKCVHQLKKQEFVALDDVLVWATVPDFESLELITTSLELKR
FT FKLQYGKDKVDHNEHPIGPLSEETFFRNLNVLSSVCLALVNSMKTSFTSKTVINERRAS
FT NHFGEVDLIECYCQRFFLSKDLVGILSYQKTGEKSRCYSISLISNGELEYIGSFYCDPK
FT RFFLPIFSQIVLLNMSREMMLWLADLNLNDSLVGDKLRKLILLIVTNPSKRNQTFLQGL
FT RYFIMAYVNQFHHVELMDRLIVPVKSYCESCLQRISFDIFRLILEGDYDNEHMTRKFKF
FT LLNVSYLCHLITKETPDRLTDQIKCFEKFMEPKLKFESVIVNPSLTENMTEDEEAQVLK
FT GVDKLLGKSLSCSTDLTSPGVSKTLLSMCVSSFNRGLLNVNGHLRQDPYRPNFTSTALD
FT LSSNKSVVVPKLDELGNPISRYDYELLVSSCVTNLAEGFKTKGKFKLDINCQEYTIMRN
FT LTNLVLKNEDKSDAKIKGEKPCSFELSQWMETLSEEQLEVLEKLKGDVNIALGKLKEKG
FT RSKSNSTLKEGVKRLDSGNTLAGCADPQQVLVNLWSEFGVMKQILVEVSLHEIKDFDPD
FT IIPPQMIQKLVFKVNNSNYKSLFFLDSVINPCPLELLIKNMTTATFDDGELFECFKYLL
FT ITAGFDQKLGTYEHKNRSRFGFKFEALKVREEGRMSSRESNSEAIARRLDKSVFTNSAL
FT RNLCFYSDESPISYSHVSPDVGKLKFGLSYKEQVGSNRELYVGDLNTKLMTRLIEDFSE
FT SVVSNMSYSCLNNEAEFEKAITDMKMCVNLGDMSLSLDHSKWGPHMSPVIFAAFLQGLD
FT LKYGPSLCKLNTDPIITLLSWHIHKVVEVPYNVIHAYVTGMIKRQLGLMNMSGSTITES
FT FVHRLLKEKREPLSHVMSVIDMGQGILHNMSDLYGLVTEQFINYAIHFLFDMNTTSYTS
FT SDDQISMIKIGSGMCNFESLKVIEEWETILNFHAFISTKFNKFVSPKTVAGTFAAEFKS
FT RFFVWGEEVPLLTKFVSAALHNVKCKTPVQLSETVDTICDQCVANGVSVEIVSYICNRT
FT NRLIRYSGFGEHPFLNVENLDVKDWVDGSRGYRLQRNIELHLESDGCTSFIRQAARKVF
FT SNIKSGKIVEQALVDLVQEDGDKAITGFLRSVGVSEEDIALLCRIRWINLCAHGDLRLV
FT LRTKLMSSRRIIETEEIPSLIKSIQSKLSKNFVKGAKKILAESINKSAFQSSIASGFIG
FT FCQSVGSKCVRTGEGGFYYIKELKSKVDLYCPCEVCARWKGVTYCSSSCLKIESFTRPL
FT MWDYFSLVLSNACELGEWVFEDVEYPKDINFLRNPNLFWLVKPRVSCQIEEKLGLTHIL
FT QSIRRNYPQLFETHLSPFMSDFQAGRTLGTMTVKFLDVCVALDLANENLGIVKHFLKNR
FT RHDIYIVKQDESSQSHIRCQKSICVDVELTSTQVCQNFMTQLIMSSLVQPLVLTSSELK
FT KFNWFQQVLTLETDEDVDLGLLTDFALQVKKFNVDRAMHSEDLSAGYISSTVSVTTFSL
FT SKPIFLQQIDSDFIGGTEDRKDFIQMIKSEFTKNSIDLQFVIQISHVKRALRFNLKRTT
FT VYTLIVRTSILKEVILNSLGQEDQSVELVVDDLELFCSGHDGNHFTLDAAPLIVQEPLI
FT NGNLKFDLVSRLEEEDLTFSYSESLPSFHFNFEKYKHELCNKFSYHLSGPVIVDEPLVL
FT DRGVILHGGRKLTTLQFDFSADRIMQALSELESLSSRDLFLFNLWVYSDQTKSKLYIHQ
FT DKLLLLVESYLSELNSSLARYDSWLNLGNYMICYSKSFKCLMISDTNGRNRLKGILCRR
FT LIEEEVQDIE"
XX
SQ Sequence 7174 BP; 2191 A; 1570 C; 1163 G; 2250 T; 0 other;
eu627612 Length: 7174 15-AUG-2008 Type: N Check: 7798 ..
1 cgcaccgagg atcctaggca caaacagctc acgcctcctg tgatcctctt
51 gcagagcacc atcaatcatg ggctccaagc aaagtgctcc ccccaaaccg
101 ctccagctcc cacaaccaag agtgtccctg ctcagggagg cgaagccctc
151 actgtacgga agatacaatt gcaaatgttg ttggtttcag gacaagaatc
201 ttgttgaatg tagcgatcac tacctctgcc tgaagtgcat cagttcaatg
251 ctaaaaagag gcaagaactg tgaaatctgt ggcaaagcaa ttccaaccta
301 cattgaagtc ggcataactc caacagcacc gcaactcaac tgagccaaag
351 gctcccccgg cgagggcccc cagtgggggc cctcgccccg ggggggcccc
401 ccccgggatc gggggagtgg tcctgcatta ctcaatgtcc tgcacctcct
451 cttcaatcaa cctcctacac agaatacctt tgagcctatt cctaccattg
501 gtgtcagaga tcattaaaca cttgaaagat ttactatagc atatcatata
551 atttcctaga ttaagccagc tatcatatct tgctaatgat gaattgagtt
601 cagacaaata gctttccact agtagcaaaa gcttgtcttg atgtatgtat
651 aacttgctct tggtttgatc tgaataaacc cacaaattaa aaagaaacaa
701 atctctggat gaaagagatt ctaattcaga taatgcttgc attattctat
751 ctgccgaaaa atcgaattga agggttgtta acttcctacc gccatgtaga
801 atcactcctc tatcaagaac caaaggctca tcaacaatta ctggtccact
851 caagtgataa gaaaacttat tacaaagttc atgtttatat ttttcaaaat
901 tgaaatgaaa ggatggcaag gactctgagt aagaaaaagt caaatcttct
951 tcctcaagtc ttgacactaa gtcaaatttt aggtttccat ttatcaaggg
1001 ctcttggaca attaaaggtg cagcatcaag ggtaaagtgg tttccatcat
1051 gcccactaca aaaaagttct aaatcatcaa caaccaattc aacactttga
1101 tcttcttgcc ccagggaatt gaggataacc tctttcaaaa tggatgttct
1151 cactatcaga gtgtatacag ttgttctctt gaggttgaat ctcaatgctc
1201 tcttgacatg tgagatttgt attacaaact gtaagtcaat actatttttt
1251 gtaaattccg atttaatcat ctgtatgaaa tctttacggt cctcagtccc
1301 accaatgaaa tctgaatcaa tctgttgcaa aaatatgggt tttgataatg
1351 aaaatgttgt cacactaact gtggaactaa tataacctgc actaaggtcc
1401 tcagaatgca ttgctctatc aacattaaac ttttttacct gtagggcaaa
1451 gtcagtgagc aaccctaagt caacatcctc atcagtctct aaggttaaga
1501 cttgttgaaa ccaattgaat ttcttcaact ctgaactggt caagactaga
1551 ggttggacca aagaactcat tattaattgt gtcataaagt tttgacaaac
1601 ttgggtggat gtcaattcaa catccacaca aatgctcttc tgacacctta
1651 tgtgtgattg tgagctctca tcctgcttta caatgtagat atcatgcctc
1701 ctattcttta agaagtgttt cacaatacct aagttctcat tggccaagtc
1751 caaagctaca caaacatcaa ggaatttgac tgtcatggtg ccaagggttc
1801 taccagcttg aaaatcactc ataaagggtg ataggtgagt ctcaaagagt
1851 tgtgggtaat ttcttctgat tgattgaaga atatgagtta gaccaagctt
1901 ttcctcaatc tgacatgaga cccttggttt aacaagccaa aaaagattag
1951 gatttcttag gaaattaata tcttttgggt actcaacatc ttcaaaaacc
2001 cattcaccaa gttcacaagc attggacaat accaaagaga agtagtccca
2051 cattaatggc cttgtgaaac tctctatctt aaggcacgaa ctggagcagt
2101 atgtgacccc tttccacctt gcgcacactt cacagggaca gtacaagtca
2151 acttttgact tcagttcttt tatataataa aatccccctt ctcctgttct
2201 cacacactta ctcccaacac tttggcagaa gcctatgaag cctgaggcta
2251 tggaagactg aaaggctgac ttgtttattg actctgcgag aatctttttt
2301 gcacctttta caaagttctt agataattta gattgtatag acttgatcaa
2351 actaggaatt tcttctgttt caattatcct ccttgaactc attaactttg
2401 ttctaaggac taacctcaaa tcaccatgag cacacaggtt gatccatctt
2451 attctacaga gtagggcaat atcctcttct gaaacaccaa cacttcttaa
2501 aaatccagta attgccttat caccatcctc ttgcacaaga tcaaccagag
2551 cttgctcaac tatttttcct gattttatgt tggagaagac tttcctagct
2601 gcttgtctaa taaagctagt gcatccatca ctctcaagat gtaattcaat
2651 attcctttga agtctataac ctctgctacc atccacccaa tctttaacat
2701 caaggttttc tacattgagg aatgggtgtt ctccaaaccc actataccta
2751 atcagtctgt tagtcctgtt acatatgtat gacacaatct caacagagac
2801 accattcgct acacattgat cacaaatcgt atccactgtt tcagataact
2851 gaacgggagt tttgcacttg acattgtgca acgcagcaga aacaaacttt
2901 gtaagtaagg gaacttcttc accccaaaca aaaaatcttg atttgaattc
2951 tgctgcaaat gtcccagcaa ctgtttttgg actgacaaat ttgttaaatt
3001 tagtagagat gaatgcatga aaatttaaaa tagtttccca ttcttcaatt
3051 actttcaatg attcaaagtt gcacattccg ctacctattt ttatcatgga
3101 gatttgatca tcactagagg tatatgatgt tgtgttcatg tcaaagagga
3151 aatgaattgc ataattaata aactgttcag taaccaaccc atacaagtca
3201 gacatattat gaagaatccc ctggcccatg tcaatcactg acatcacgtg
3251 actcagaggt tctctcttct ccttaagaag tctatgtaca aatgattcag
3301 taatagttga tccactcatg ttcatcagcc ccagttgtct cttgatcatt
3351 cccgtaacat atgcatgaat cacattatat ggcacctcca caactttgtg
3401 gatgtgccaa gagagtagtg ttataattgg atcggtgttc aatttacata
3451 aggatggacc atacttaaga tccaatccct gcagaaatgc tgcaaatata
3501 acaggagaca tatgaggtcc ccactttgag tgatccagtg acaaactcat
3551 atcccctaaa ttcacacaca tcttcatgtc agttatagcc ttttcaaatt
3601 cagcttcatt atttaagcaa gaataactca tgttggaaac cacggattct
3651 gaaaaatcct caattaaccg agtcatcagt tttgtattca aatcacccac
3701 ataaagttct ctatttgatc caacctgctc tttgtagctc aaaccaaatt
3751 taagtttccc cacatcaggt gaaacatgac tataagaaat cggtgattca
3801 tcagaataaa aacaaagatt tcttaaggct gagtttgtaa acactgactt
3851 gtccaacctt cttgcaatag cttctgagtt actttctcta gaactcatcc
3901 taccttcctc ccgaacttta agtgcctcaa acttgaagcc aaatcttgat
3951 ctatttttat gttcatacgt acccaatttt tggtcaaatc cagctgttat
4001 gagtaaatat ttgaaacatt caaacaactc accatcatca aaagtggctg
4051 ttgtcatgtt tttgattagt agctctagag gacatgggtt tataacacta
4101 tccaaaaaga acaaagattt gtaattagaa ttattcactt tgaaaaccaa
4151 tttctgaatc atctggggtg gtattatgtc tggatcaaaa tcctttattt
4201 catgcaaaga gacttctacc aaaatctgct tcataacacc aaattcactc
4251 cataagttca ctaaaacctg ttgtggatct gcacatcctg ctagagtatt
4301 tccactatct aacctcttca ctccctcttt taaagtacta tttgatttag
4351 atctcccctt ttccttcagc tttcctaatg ctatgttaac atctccttta
4401 agtttctcca aaacctcaag ttgctcttct gacaaggtct ccatccactg
4451 tgatagttca aaactgcaag gcttttctcc cttgattttt gcatcacttt
4501 tatcttcatt tttcaagacc agattggtca aatttctcat tatggtgtat
4551 tcttggcaat tgatgtccag cttgaacttg ccttttgttt tgaatccttc
4601 agcaaggttt gtaacacaag aggaaacaag taactcatag tcgtatctgg
4651 aaataggatt cccaagttca tcaagcttcg gcacaacaac acttttattg
4701 cttgacaagt ctagagcagt actggtgaag ttgggtctat aagggtcttg
4751 tctcaggtga ccattcacat ttaacagccc tctattaaag ctggacacac
4801 acatgcttaa cagagtcttc gacacaccag gacttgttaa atctgtggaa
4851 caactcaaac tcttacccaa aagtttgtct actcctttta gcacttgggc
4901 ctcctcatcc tccgtcatgt tctcagtcaa acttggattg acaatgactg
4951 attcaaattt taacttaggt tccatgaatt tctcaaaaca tttaatctga
5001 tctgtaagtc tgtctggtgt ttcttttgtt attagatgac atagataact
5051 aacattgagt aaaaacttaa attttctagt catgtgctcg ttatcataat
5101 ccccttctaa aatcaaccta aagatgtcaa aagaaatacg ttgcagacaa
5151 ctttcacaat agcttttcac tggtactatt aatctatcca tcaattctac
5201 atggtgaaac tgattcacat aagccattat gaaataccta agaccttgca
5251 ggaaggtctg atttctctta ctgggatttg ttacgatgag caatatcaac
5301 tttcttagtt tatcccctac caaactgtca ttgaggttca ggtcagctaa
5351 ccagagcatc atctctcttg acatgtttaa caaaacaatc tgagaaaaaa
5401 taggcaagaa aaacctttta ggatcacaat aaaaggaccc tatatactct
5451 aattctccat tggaaattaa actaatgcta taacatcttg acttctcccc
5501 agttttttgg taagaaagaa tcccaactaa gtctttagat agaaaaaatc
5551 tttggcaata acattctatg agatcaactt ctccaaagtg attagaagct
5601 ctcctttcat ttatcacagt ctttgaggta aatgaggttt tcattgaatt
5651 caccaaggct aagcacacag aagataagac attaagattc ctaaaaaatg
5701 tctcttcaga aagaggacca atgggatgct cattatgatc caccttgtcc
5751 tttccatatt gtaatttgaa tcttttcaac tctagtgagg ttgtgattaa
5801 ttctaagctc tcgaaatctg gaactgttgc ccagactaaa acatcatcta
5851 aggcaacaaa ttcctgtttt ttcaactgat gaacacactt tgcaatccaa
5901 ttctcacagt tctttagttt gttgataagt ttattcctca attcattgag
5951 gtcaaaatat ctgtcattgg aaaacaatgc caactgacct gccataagtc
6001 cacacctcct gtattctgtc aacacttcag ggttctgttt ccatgagtga
6051 acaatgaagt tcaccataat taagtcaagg aacaacaaag tgtttcttct
6101 tgtgttcagc agtttagctg actttatttt attgcactga ctcaatagtt
6151 ttaaatagat ttgttcagct tgagaaagtg aatcactatg ccacattttc
6201 gcatagatgg gatgataatc gctatgaagt ggctgccgct ttaatgtacc
6251 taacttgtct attattgaat acaattttga tgaacatgac atgcaatcaa
6301 ctggatgttc actatgatgt gttatttgat ccaacttggc tagaaggcca
6351 tcacgatttg taaagacaaa cttatgaaga cttttgttgt ttttatactc
6401 tttaatgaag aattccttca agacgtttat tagattctct tggatttcac
6451 tttccttcat tttactggaa aggttcccaa acatatgttt ctttaactca
6501 tcgcgatatt taagcccagt ttgaggaagc ttttctatat tctcaaaacc
6551 cagactctga ttttctagct tggacagact agtaattaat ctctgatact
6601 caagctcctc aatctcttca ccagattccc tcacaaattt tattaactgc
6651 aataacagcc acctgaatct ttctatcacc caatcgtcta caaatctatt
6701 gtaatagttg gttctcccat caacaagggg aactaaggtg atcccacata
6751 aactaaggtc atcttttaat gacaacaact tgctcatgtc ctgattgtat
6801 ttctgttcaa aagacactgg attcaccctc acgaaggttt ccaaaagaat
6851 caaaacatta ccatatagtg aaaaaccatc tggtacgatt ctcggtaatg
6901 caatggacat tatgccctct ttcctcagaa tcccctcaat tgttagcgag
6951 tctgagttgt gagtgcagtt gttagcttcc gcagagtcta gttccactag
7001 taatgacaac aatttgaatc cttctgtaag gatcatttta gcatcattct
7051 ggcaggtaac taaggttatc tgttctgtta cttttggcct agctgggaaa
7101 tgcttcctaa gtagatcaaa taactgatta acaatatcat ccatgatcaa
7151 ggaatgccta ggatcctcgg tgcg