Sequence of DPV Blainvillea yellow spot virus
Blainvillea yellow spot virus isolate BR:Coi25:07 segment DNA-A, complete sequence.
ACC No: EU710756
Dated: 2008-10-24 | Length: 2666 | CRC: -1500229857
ID EU710756; SV 1; circular; genomic DNA; STD; VRL; 2666 BP.
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AC EU710756;
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DT 09-JUN-2008 (Rel. 96, Created)
DT 24-OCT-2008 (Rel. 97, Last updated, Version 2)
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DE Blainvillea yellow spot virus isolate BR:Coi25:07 segment DNA-A, complete
DE sequence.
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KW .
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OS Blainvillea yellow spot virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2666
RX PUBMED; 18726171.
RA Castillo-Urquiza G.P., Beserra J.E.Jr., Bruckner F.P., Lima A.T.,
RA Varsani A., Alfenas-Zerbini P., Murilo Zerbini F.;
RT "Six novel begomoviruses infecting tomato and associated weeds in
RT Southeastern Brazil";
RL Arch. Virol. 153(10):1985-1989(2008).
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RN [2]
RP 1-2666
RA Castillo-Urquiza G.P., Beserra J.E.A.Jr., Bruckner F.P., Lima A.T.M.,
RA Varsani A., Zerbini P.A., Zerbini F.M.;
RT ;
RL Submitted (09-MAY-2008) to the EMBL/GenBank/DDBJ databases.
RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n,
RL Vicosa, MG 36570-000, Brazil
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FH Key Location/Qualifiers
FH
FT source 1. .2666
FT /organism="Blainvillea yellow spot virus"
FT /segment="DNA-A"
FT /host="Blainvillea rhomboidea"
FT /isolate="BR:Coi25:07"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /collection_date="17-Jul-2007"
FT /db_xref="taxon:536081"
FT gene 235. .990
FT /gene="CP"
FT CDS 235. .990
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /note="AV1"
FT /db_xref="UniProtKB/TrEMBL:B3GNC5"
FT /protein_id="ACD93180.1"
FT /translation="MPKRDAPWRHMTGTSKISRSVNFSPRSSVGPRSNKANDWVNRPMY
FT RKPKIYRMYRNPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCVSDVTRGNGITHRVGKRF
FT CVKSVYIIGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSISN"
FT gene complement(987. .1385)
FT /gene="Ren"
FT CDS complement(987. .1385)
FT /codon_start=1
FT /gene="Ren"
FT /product="replication enhancer protein"
FT /note="AC3"
FT /db_xref="UniProtKB/TrEMBL:B3GNC6"
FT /protein_id="ACD93183.1"
FT /translation="MDSRTGELITAPQAENGVYIWETPNPLYFKTYQVEDIRYTTTRVY
FT HIQIRFNHNVRKALDLHKAYLNFQVWTTSLTASGTTYLNRFQYLVMLYLNRSGVISINN
FT VIRAVRFATDKAYIHHVLEQHSIKFRIY"
FT gene complement(1132. .1527)
FT /gene="Trap"
FT CDS complement(1132. .1527)
FT /codon_start=1
FT /gene="Trap"
FT /product="trans-activating protein"
FT /note="AC2"
FT /db_xref="UniProtKB/TrEMBL:B3GNC7"
FT /protein_id="ACD93182.1"
FT /translation="MRNSSFSTPPSIKAQHRAAKQRQRAIRRRRIDLVCGCSIFLHINC
FT RGHGFTHRGTHHCTSGGEWRLYLGDTKSPLFQDVPSRGHQIHNDSSVSHTDPVQPQRAE
FT SVGSPQGVSELPSLDDFPDSFWDDILK"
FT gene complement(1448. .2524)
FT /gene="Rep"
FT CDS complement(1448. .2524)
FT /codon_start=1
FT /gene="Rep"
FT /product="replication-associated protein"
FT /note="AC1"
FT /db_xref="UniProtKB/TrEMBL:B3GNC8"
FT /protein_id="ACD93181.1"
FT /translation="MSKPGRFRIQSKNYFLTYPKCSIPKEEALTQLLALDTPTNKKYIR
FT VCRELHENGEPHLHALLQFEGKFTCTNCRFFDIRHPRNSNVCHGKYESCRSSSDAKSYV
FT EKDGDYIEWGNFQIDGRSARGGKQTANDSYSKALNTSSVEQALDIIKEEQPQHFFLQYH
FT NLVANAQRIFKSIPEPWVPPFPLSSFTNVPEEMQAWADDYFGRSAAARPERPISIIIEG
FT DSRTGKTMWAGALGVHNYLSGHLDFNPKCYSNEAHYNIIDDVDPKYLKMKHWKELIGAQ
FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKRFLDREENSGLNNWTKHNAKFVFLN
FT TTLYQSATPSSETTSTCD"
FT gene complement(2110. .2367)
FT /gene="AC4"
FT CDS complement(2110. .2367)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4"
FT /db_xref="UniProtKB/TrEMBL:B3GNC9"
FT /protein_id="ACD93184.1"
FT /translation="MGSLISMLCCNSKGNSRARIADSSIYDIQEIPMFVMASTNHAGHP
FT PTPNHMLRRTEITSNGVIFRSTEDLLEEVNRQLTIHTQRR"
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SQ Sequence 2666 BP; 676 A; 560 C; 620 G; 810 T; 0 other;
eu710756 Length: 2666 24-OCT-2008 Type: N Check: 8131 ..
1 acctgagggc cgcccccgcc tggagactcc ccttttgacg tggcgccctg
51 atgtccattg gattatatta tgttggagat tgggccggtg tcttttgccc
101 cacctgcttt atttaaagtt gtctaggccc aatcattatg cgtttcccga
151 gcttagatat tattaaagac gtgggcgcca agttcgataa aggctataaa
201 tggtgtggtg accacttggt cactttaatt caaaatgcct aagcgcgatg
251 ccccatggcg ccatatgaca gggacgtcca aaattagccg gtccgttaat
301 ttctcacctc gttcgagtgt tgggccaaga tccaacaagg ccaatgattg
351 ggttaacagg cctatgtaca ggaagcccaa gatatatcga atgtacagga
401 accccgatgt tccaaggggt tgtgaagggc cttgtaaagt ccagtcttat
451 gagcaacggc atgatgtatc tcatgttggc aaggtgatgt gtgtgtcgga
501 cgtgacacgc ggcaatggta tcacccatcg tgttgggaaa cgtttttgtg
551 ttaagtccgt atatattata ggtaagatat ggatggacga gaatatcaag
601 ctgaagaacc acaccaacag tgttatgttt tggctggtga gagaccgtag
651 accctatgga acccctatgg actttggcca agtgtttaat atgtttgaca
701 atgagcccag tacggctact gttaagaacg atcttcgtga tcgttttcaa
751 gtcatgcaca agttttatgg caaagtcact ggtggacagt atgcaagtaa
801 tgaacaggcg ctcgttaagc gcttttggaa ggtgaacaac catgtggtgt
851 acaatcatca ggaagctggg aagtatgaga atcacacgga gaacgcatta
901 ttgttgtata tggcatgtac tcatgcctct aatcctgtgt atgctacgtt
951 aaagatacgg atctattttt acgattcgat atcaaattaa taaattctga
1001 attttattga atgttgttca agtacatgat ggatatatgc tttgtctgtt
1051 gcaaagcgaa ctgctctaat tacattgtta atcgaaatta cacctgaacg
1101 gttaagatac aacataacta aatactggaa tctatttaag tatgtcgtcc
1151 cagaagctgt cagggaagtc gtccagactt ggaagttcag atacgccttg
1201 tggagatcca acgctttccg cacgttgtgg ttgaaccgga tctgtatgtg
1251 atacactcga gtcgttgtgt atctgatgtc ctctacttgg tacgtcttga
1301 aatagagggg atttggtgtc tcccagatat agacgccatt ctccgcctga
1351 ggtgcagtga tgagttcccc tgtgcgtgaa tccatgtcct ctgcagttaa
1401 tatggagaaa tatggaacag ccacaaacta aatcaattcg tcttctccta
1451 atcgcacgtt gacgttgttt cgctgctcgg tgttgcgctt tgatagaggg
1501 tggtgttgag aaagacgaat ttcgcattgt gctttgtcca gttatttaat
1551 cctgagtttt cctctctgtc taggaacctt ttatagctgg ccccctcgcc
1601 aggattgcaa agcacgatgc atgggatgcc ccctttaatt tgaactggtt
1651 taccgtattt acaatttgac tgccagtcct tctgggcccc aattaactct
1701 ttccagtgtt tcatctttaa atatttgggg tccacgtcat caataatatt
1751 gtagtgtgct tcgttggaat agcacttagg gttaaagtct aggtgaccac
1801 ttaaataatt gtggacccct aaagcaccgg cccacatcgt cttccctgtt
1851 cgagaatcac cttcaattat tatactaata ggtctctccg gccgcgcagc
1901 ggcacttctt ccgaaataat cgtccgccca agcttgcatc tcttctggca
1951 cgttagtgaa tgatgacagt ggaaacggag gaacccatgg ctctggaatt
2001 gatttaaata tccgttgagc atttgcaact aggttgtgat attggaggaa
2051 gaagtgttgt ggctgttcct cctttattat atcaagagcc tgttccacgg
2101 acgatgtgtt taacgccttt gagtatgaat cgttagctgt ctgtttacct
2151 cctcgagcag atcttccgtc gatctgaaaa ttaccccatt cgatgtaatc
2201 tccgtccttc tcaacatatg atttggcgtc ggaggatgac ctgcatgatt
2251 cgtacttgcc atgacaaaca ttggaatttc ttggatgtcg tatatcgaag
2301 aatctgcaat tcgtgcacgt gaatttccct tcgaattgca gcaaagcatg
2351 gagatgaggc tccccatttt cgtgtaactc tctacataca cgaatatatt
2401 tcttgttcgt cggtgtatct aatgcgagaa gctgagtgag agcttcttct
2451 ttgggtatgg aacactttgg atatgtgagg aaataatttt tagactgaat
2501 tctaaaacgc ccaggcttgc tcatatttga ctccaaatga gtgtctctca
2551 aaccccccct tgaaactggg cttatagtat tggagattgg ggacaatata
2601 tatgcgagaa gatatttggg ttagattgtg gtccctacac ccttgcggcc
2651 ctcagtatat aatatt